| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62391777
Identifier: 62391777
GI number: 62391777
Start: 3111938
End: 3112762
Strand: Reverse
Name: 62391777
Synonym: cg3251
Alternate gene names: NA
Gene position: 3112762-3111938 (Counterclockwise)
Preceding gene: 62391779
Following gene: 62391776
Centisome position: 94.82
GC content: 52.73
Gene sequence:
>825_bases ATGACAGCCACGTTAAGCGCGGAATCTTCTCGCAATGGTAAAAAGCCGCGGCCTCGAGTGAGTGTTTCCCAGGTTGTTGG TGAAATCTTGCTCACCGTAGGCATTTTGGCCTTGTTATTCGCATACTATGAGGCCTATTGGACCAACGTGGAATCTGGGA AATTACAAGAATCGGCTGGTCAAAAGCTTGATGAAGACTGGAATGAAGCTCGGGTGAATCCTCGACAAAAGCTCACCCCG GAACTTGGTGAGGCATTTGCCCGGATGTATGTTCCAGCTTTCGGCTCTGACTTCAACTTCGCAGTGATTGAAGGAACCGA TGAGGAAGACCTTCTTGCCGGTCCTGGCCGTTATGTGGATTCCCAAATGCCTGGTGAAGCCGGAAACTTTGCAGTGGCAG GCCACCGAGTGGGCAAGGGTGCGCCATTCAATGATCTAGGAAACCTGGAAGTCTGCGATGCGATCGTGGTGGAGACTTAC AATTCCTGGGATGTGTACCGCGTGATGCCGATGTCCACCAACGGTGCAGATCGTGCAGCAGAAGCTGCGGATTGCTTCAA CGAAAACCAGGTCAGCCGCATGGCTGAAGGTGACTATGTGAATGTGTCCGGACGAAGCATCACCACTCCGGATCGCATCG ATGCCACCTACCCCACACCGGGCGTCTTCGACACTGCAGTGCGTGAAGGATCAGAAGCTCTGCTTACCTTGACCACGTGT CACCCGCAGTTCTCCAACGCTGAGCGCATGATTGTGCACGCAATGTTGGTGGAAGAAATCGATAAATCAAGTGGCGAACG CCCTGCAGCTTTGGAGGAAAACTAA
Upstream 100 bases:
>100_bases ATCTCATGTGCACTTGTCTCATGGTACGTGTCTGAAAGTACGGGTACCTAAAAGGACGTTGAGATTCGCCTAACAAAGAT TTTGGACGAAAACAGTAACG
Downstream 100 bases:
>100_bases ATGTATTCACTTCTGTGGCACTATCTTCCAGGACCTTGGTTTGTAAAACTTCTCATCGTATTGGCGCTCATTGTGTTGGT GTTCTTCCTCCTCATGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Sortase; Sortase-Like Protein; Peptidase; Sortase Family Protein LPXTG-Site Transpeptidase; LOW QUALITY PROTEIN Sortase
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTATLSAESSRNGKKPRPRVSVSQVVGEILLTVGILALLFAYYEAYWTNVESGKLQESAGQKLDEDWNEARVNPRQKLTP ELGEAFARMYVPAFGSDFNFAVIEGTDEEDLLAGPGRYVDSQMPGEAGNFAVAGHRVGKGAPFNDLGNLEVCDAIVVETY NSWDVYRVMPMSTNGADRAAEAADCFNENQVSRMAEGDYVNVSGRSITTPDRIDATYPTPGVFDTAVREGSEALLTLTTC HPQFSNAERMIVHAMLVEEIDKSSGERPAALEEN
Sequences:
>Translated_274_residues MTATLSAESSRNGKKPRPRVSVSQVVGEILLTVGILALLFAYYEAYWTNVESGKLQESAGQKLDEDWNEARVNPRQKLTP ELGEAFARMYVPAFGSDFNFAVIEGTDEEDLLAGPGRYVDSQMPGEAGNFAVAGHRVGKGAPFNDLGNLEVCDAIVVETY NSWDVYRVMPMSTNGADRAAEAADCFNENQVSRMAEGDYVNVSGRSITTPDRIDATYPTPGVFDTAVREGSEALLTLTTC HPQFSNAERMIVHAMLVEEIDKSSGERPAALEEN >Mature_273_residues TATLSAESSRNGKKPRPRVSVSQVVGEILLTVGILALLFAYYEAYWTNVESGKLQESAGQKLDEDWNEARVNPRQKLTPE LGEAFARMYVPAFGSDFNFAVIEGTDEEDLLAGPGRYVDSQMPGEAGNFAVAGHRVGKGAPFNDLGNLEVCDAIVVETYN SWDVYRVMPMSTNGADRAAEAADCFNENQVSRMAEGDYVNVSGRSITTPDRIDATYPTPGVFDTAVREGSEALLTLTTCH PQFSNAERMIVHAMLVEEIDKSSGERPAALEEN
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29857; Mature: 29726
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLSAESSRNGKKPRPRVSVSQVVGEILLTVGILALLFAYYEAYWTNVESGKLQESAG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC QKLDEDWNEARVNPRQKLTPELGEAFARMYVPAFGSDFNFAVIEGTDEEDLLAGPGRYVD CHHHHCHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCC SQMPGEAGNFAVAGHRVGKGAPFNDLGNLEVCDAIVVETYNSWDVYRVMPMSTNGADRAA CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHEEECCCCCCEEEEEEECCCCCHHHH EAADCFNENQVSRMAEGDYVNVSGRSITTPDRIDATYPTPGVFDTAVREGSEALLTLTTC HHHHHHCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEC HPQFSNAERMIVHAMLVEEIDKSSGERPAALEEN CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TATLSAESSRNGKKPRPRVSVSQVVGEILLTVGILALLFAYYEAYWTNVESGKLQESAG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC QKLDEDWNEARVNPRQKLTPELGEAFARMYVPAFGSDFNFAVIEGTDEEDLLAGPGRYVD CHHHHCHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCC SQMPGEAGNFAVAGHRVGKGAPFNDLGNLEVCDAIVVETYNSWDVYRVMPMSTNGADRAA CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHEEECCCCCCEEEEEEECCCCCHHHH EAADCFNENQVSRMAEGDYVNVSGRSITTPDRIDATYPTPGVFDTAVREGSEALLTLTTC HHHHHHCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEC HPQFSNAERMIVHAMLVEEIDKSSGERPAALEEN CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA