| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is glf [H]
Identifier: 62391725
GI number: 62391725
Start: 3060404
End: 3061609
Strand: Reverse
Name: glf [H]
Synonym: cg3196
Alternate gene names: 62391725
Gene position: 3061609-3060404 (Counterclockwise)
Preceding gene: 62391727
Following gene: 62391723
Centisome position: 93.26
GC content: 55.22
Gene sequence:
>1206_bases ATGACGGAATCGAAAAATTACGACTTAATCGTTGTAGGCTCCGGCCTCTTCGGGCTCACCGTGGCTGAGCGTGCAGCTAG CCAGCTGGGTAAGAAAGTCCTCATCGTTGAACGCCGCTCGCACCTCGGTGGCAATGCTTACTCTGAAGCAGAACCAGAGA CCGGCATTGAAATCCACAAATACGGCGCGCACCTCTTCCACACCTCCAACACACGCGTGTGGGAATACGTCAACCAGTTC ACCAGTTTCACCGGCTACCAGCACCGCGTCTTCGCAATGCACAACGGCACCGCCTACCAATTCCCCATGGGACTGGGCCT GATTAACCAGTTCTTCGGCAAGTACTACAGCCCAGATGAAGCCCGTGAGCTCATCAAGGAACAGTCTGCAGAAATCGATT CCTCCGACGCCACCAACCTCGAAGAAAAGGCCATTTCCCTCATTGGTCGCCCACTTTACGAGGCATTCATCCGCGACTAC ACCGCAAAGCAGTGGCAGACTGATCCAAAGAACCTCCCAGCCGGCAACATCACCCGCCTGCCAGTTCGCTACAACTTCAA CAACCGCTATTTCAACGACACCTACGAAGGCCTTCCCACAGACGGCTACGCGGCATGGTTGGAAAAGATGGCAGAGCATG AGCTTATCGACGTCCGCCTCGACACCGACTGGTTCGACGTTCGCGATGACCTCCGCGCAAGCAACCCCGACGCACCTGTG GTCTACACCGGCCCACTCGACCTCTACTTCAACTACGCAGAGGGCAAGCTGGGATGGCGCACCCTCGACTTTGAAACCGA AGTAGTAGAAACCGGTGACTTCCAAGGAACCCCAGTGATGAACTACAACGATGCGGACGTACCTTTCACCCGCATCCACG AGTTCCGTCACTTCCACCCAGAGCGTGATGACAGTTACCCCAAGGATAAGACCGTCATCATGCGCGAGTTCTCCCGTTTC GCAGATAACGAGGATGAGCCTTATTACCCAATCAACACTCCAGACGACCGAGACATGCTGAAGCAGTACCGCCTTCTGGC TGCTGAAGAGGCTGCTAATAATAAGGTGCTGTTCGGCGGTCGACTGGGCACGTACCAGTACCTCGACATGCACATGGCTA TCGGTTCTGCGCTGAGCATGTTTGACAACAAGCTGGTGCCGTTCTTTGAAGAAGGCACACCGCTAGAGCAGGAACGCGGA CACTAA
Upstream 100 bases:
>100_bases AGGTATCTGGGTGTGGATATGCCCTGCTAACTGGAGAAACTTGGCCCGATCGGGTGTCTGAAATTTCGGCAACGCCGAAA TGTAAGTTAGTGTCGAATGC
Downstream 100 bases:
>100_bases AAGGAAGGGCATCTCCCACATAGCGGAGATGCCCTTTTCTTTGTATCTACTTGCTGTACACCGGAGTGTTCATACCTTCG TAGCGCGCCTTCAACTGCAT
Product: UDP-galactopyranose mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHKYGAHLFHTSNTRVWEYVNQF TSFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDEARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDY TAKQWQTDPKNLPAGNITRLPVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVRLDTDWFDVRDDLRASNPDAPV VYTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHPERDDSYPKDKTVIMREFSRF ADNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGGRLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERG H
Sequences:
>Translated_401_residues MTESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHKYGAHLFHTSNTRVWEYVNQF TSFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDEARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDY TAKQWQTDPKNLPAGNITRLPVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVRLDTDWFDVRDDLRASNPDAPV VYTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHPERDDSYPKDKTVIMREFSRF ADNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGGRLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERG H >Mature_400_residues TESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHKYGAHLFHTSNTRVWEYVNQFT SFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDEARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDYT AKQWQTDPKNLPAGNITRLPVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVRLDTDWFDVRDDLRASNPDAPVV YTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHPERDDSYPKDKTVIMREFSRFA DNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGGRLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERGH
Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]
COG id: COG0562
COG function: function code M; UDP-galactopyranose mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788348, Length=377, Percent_Identity=43.236074270557, Blast_Score=310, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002937 - InterPro: IPR016040 - InterPro: IPR004379 - InterPro: IPR015899 [H]
Pfam domain/function: PF01593 Amino_oxidase; PF03275 GLF [H]
EC number: =5.4.99.9 [H]
Molecular weight: Translated: 46182; Mature: 46051
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHK CCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE YGAHLFHTSNTRVWEYVNQFTSFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDE CCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEECCHHHHHHHHHHHCCCCCHH ARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDYTAKQWQTDPKNLPAGNITRL HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE PVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVRLDTDWFDVRDDLRASNPDAPV EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCE VYTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHP EEECCCEEEEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC ERDDSYPKDKTVIMREFSRFADNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGG CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC RLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERGH CCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHCCCC >Mature Secondary Structure TESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHK CCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE YGAHLFHTSNTRVWEYVNQFTSFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDE CCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEECCHHHHHHHHHHHCCCCCHH ARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDYTAKQWQTDPKNLPAGNITRL HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE PVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVRLDTDWFDVRDDLRASNPDAPV EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCE VYTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHP EEECCCEEEEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC ERDDSYPKDKTVIMREFSRFADNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGG CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC RLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERGH CCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8752339 [H]