| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
Click here to switch to the map view.
The map label for this gene is 62391717
Identifier: 62391717
GI number: 62391717
Start: 3050018
End: 3052078
Strand: Reverse
Name: 62391717
Synonym: cg3187
Alternate gene names: NA
Gene position: 3052078-3050018 (Counterclockwise)
Preceding gene: 62391718
Following gene: 62391716
Centisome position: 92.97
GC content: 53.52
Gene sequence:
>2061_bases ATGACGTTTAGCCCCCAGCGTCCGGAGTTTGAGACCGGTAAGCAGCCAGATCCAGAAACTGAACACGCAGGTGACTTCTT TGAAGAAACCTCAAGCAGTGCTCCTCGCGCCGCATCTAACGGTTCTTCTGGTCCGAACTACACCCTCATTACAACGTTTC TAGCGGCCCTTACTGCTGGCATCTTTGCTTTCTGGGCAGGCTGGACCCGCAAATGGATCAGCGACGACGGACTGATCGTC CTACGCACCGTCCGAAACCTCCTGGCTGGAAACGGGCCAGTATTCAACGCTGGCGAACGCGTCGAAGCCAACACATCTAC TCTGTGGCAATACTGCATCTATCTGGTTGCCTTAGTAACTGACTATCGCCTCGAAGATATTGCTCTGTGGCTTGCGCTGC TGTTCACCACCGCAGCGTCCATCATCGGTGTCCTGGGTACCGCGCATCTCCACCGCAAACGCATTGCCGTATTGCTTCCT GCAGGCGTGATCGGCTACTTCAGCCTTTCCCCGGCGCGAGACTTTGCCACTTCCGGATTGGAGTGGGGCCTATCTTTGAT GTGGATTTCCATCCAATGGCTGCTGCTGGTGTTGTGGGCGACTTCGGGCAAGACCTCGGGCAAGAAGGCTTCGGGCGCAA AAACTTCAAATCCTATCGTTAATGCCGGTGCAATAACCTATGCTTTGGCCTTTTGGTCAGGCTTGAGCTGGCTGGTTCGC CCAGAACTGGCGATGTATGGCGGTTTGACTGGAGTGTTGCTGCTGCTTACTGCGCCACGATGGCGGGTAGTTTTGGGGAT CCTGGTGGCGGCTTTGCCTCTTCCAGCTGCGTACCAAATCTTCCGCATGGGTTATTACGGGCTGATGGTGCCGCACACGG CTGTAGCGAAATCAGCCTCAGATGCGGTGTGGGGGACTGGTTGGGAGTATGTTGAGGATTTCACGGGGCCTTACAACCTG TGGCTCGGTTTGGCCTTGCTGTTGGCCGCAGGCGCGTTGACAGTGTGGAAAACTGACAAGCACTTAGCGATACCGAAGGG GCGGCTGGGGGTGCGCACTCCGGGTATGGCTATAGCGTTGCTGGTTATCTGTGCGCTCGTCCACTTCCTTTACGTTATCC GTGTTGGTGGCGACTTCATGCATGGACGCATGCTGCTCCTTCCACTTTTTGCCATTCTGCTGCCTGTTTCTGTCATTCCG GTCAATGTTGTTGATCGAGGTTGGCAGGATTTGGTTGCGCTGGTTCTCGTTTTCTCTACGTGGGTGTGGTCCACTGTGGT TTTTGTGCAGGGGCACCAATGGGAAAATACCGGCCAGCATGTGGTTGATGAGCGTGATTTTTGGATTGATTTCACCAACC GAGATGAAGATCATCCTCCGCTTTATGCAGAGGATTTCCTCACTGTTGATTCCATGAATGATTACGCAGAGGTTATGCGC GATCAGACGTTGGTTAATCCAACAGGCCAGCAACTCAATATTCTGGCCAGCAGTGACCCGACCACTTATTCGTGGATCAC CACACCTCGCGTGGAGGGGGTTGAAGCCGGTGATTTGGCTAACCTCTCGCCAACTGTTTTCCATGTGAACCTCGGCATGA CCTCCATGAACGCACCGCTCAACGTGCGTGTGACAGACCTGATTGGTTTGGCAACGCCACTGGCAGCCCGCCAGCCACGC ATTGAAGGTGGTCGAATCGGCCACGATAAATTGATGGACTTGGAATGGCAGGTCGCGGAATCCGCCACTCCGCTGGCGTA CACACCGGGTTGGTTGGATACTCAAAAGACTTATGAGGCCCGCCAGGCGCTACGCCACCCAGAATTGGTTCACCTTTTCC AGACTTACCGTGAGCCAATGTCCTACCACCGGTTTGTGGACAATATTAAATACGCACTCACTACCGGAAGAACACTGGAA ATTTCAGATAATCCTGAAGATCTTTTGAAAGAATTTAACCCGACCCCTGCAGAGATTCAGGACGGGTTAGAAACTATTGC TTGGCCTGGGGAAATTAAACTTGATGAACCTCGCGGAGAACCTTTATATAGCTCTCAGTAA
Upstream 100 bases:
>100_bases TGTACATCATGCCGATGTTTTGAATATTTACCAATGAACATGCTCTGACCAGCATGTCCATTAACGTTTGAGGCCACATG CGGTGCTAGCATGTGGCCTC
Downstream 100 bases:
>100_bases ACACTTATTCGCAAATCATTGGGCTGTGATAACTACCCAAGAGTGTCACAACTTGGTAACGTGTGGGCGGAAAAACAAGA TAGGCATCGAGAGGTATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Arabinosyltransferase AftB; Integral Membrane Protein
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MTFSPQRPEFETGKQPDPETEHAGDFFEETSSSAPRAASNGSSGPNYTLITTFLAALTAGIFAFWAGWTRKWISDDGLIV LRTVRNLLAGNGPVFNAGERVEANTSTLWQYCIYLVALVTDYRLEDIALWLALLFTTAASIIGVLGTAHLHRKRIAVLLP AGVIGYFSLSPARDFATSGLEWGLSLMWISIQWLLLVLWATSGKTSGKKASGAKTSNPIVNAGAITYALAFWSGLSWLVR PELAMYGGLTGVLLLLTAPRWRVVLGILVAALPLPAAYQIFRMGYYGLMVPHTAVAKSASDAVWGTGWEYVEDFTGPYNL WLGLALLLAAGALTVWKTDKHLAIPKGRLGVRTPGMAIALLVICALVHFLYVIRVGGDFMHGRMLLLPLFAILLPVSVIP VNVVDRGWQDLVALVLVFSTWVWSTVVFVQGHQWENTGQHVVDERDFWIDFTNRDEDHPPLYAEDFLTVDSMNDYAEVMR DQTLVNPTGQQLNILASSDPTTYSWITTPRVEGVEAGDLANLSPTVFHVNLGMTSMNAPLNVRVTDLIGLATPLAARQPR IEGGRIGHDKLMDLEWQVAESATPLAYTPGWLDTQKTYEARQALRHPELVHLFQTYREPMSYHRFVDNIKYALTTGRTLE ISDNPEDLLKEFNPTPAEIQDGLETIAWPGEIKLDEPRGEPLYSSQ
Sequences:
>Translated_686_residues MTFSPQRPEFETGKQPDPETEHAGDFFEETSSSAPRAASNGSSGPNYTLITTFLAALTAGIFAFWAGWTRKWISDDGLIV LRTVRNLLAGNGPVFNAGERVEANTSTLWQYCIYLVALVTDYRLEDIALWLALLFTTAASIIGVLGTAHLHRKRIAVLLP AGVIGYFSLSPARDFATSGLEWGLSLMWISIQWLLLVLWATSGKTSGKKASGAKTSNPIVNAGAITYALAFWSGLSWLVR PELAMYGGLTGVLLLLTAPRWRVVLGILVAALPLPAAYQIFRMGYYGLMVPHTAVAKSASDAVWGTGWEYVEDFTGPYNL WLGLALLLAAGALTVWKTDKHLAIPKGRLGVRTPGMAIALLVICALVHFLYVIRVGGDFMHGRMLLLPLFAILLPVSVIP VNVVDRGWQDLVALVLVFSTWVWSTVVFVQGHQWENTGQHVVDERDFWIDFTNRDEDHPPLYAEDFLTVDSMNDYAEVMR DQTLVNPTGQQLNILASSDPTTYSWITTPRVEGVEAGDLANLSPTVFHVNLGMTSMNAPLNVRVTDLIGLATPLAARQPR IEGGRIGHDKLMDLEWQVAESATPLAYTPGWLDTQKTYEARQALRHPELVHLFQTYREPMSYHRFVDNIKYALTTGRTLE ISDNPEDLLKEFNPTPAEIQDGLETIAWPGEIKLDEPRGEPLYSSQ >Mature_685_residues TFSPQRPEFETGKQPDPETEHAGDFFEETSSSAPRAASNGSSGPNYTLITTFLAALTAGIFAFWAGWTRKWISDDGLIVL RTVRNLLAGNGPVFNAGERVEANTSTLWQYCIYLVALVTDYRLEDIALWLALLFTTAASIIGVLGTAHLHRKRIAVLLPA GVIGYFSLSPARDFATSGLEWGLSLMWISIQWLLLVLWATSGKTSGKKASGAKTSNPIVNAGAITYALAFWSGLSWLVRP ELAMYGGLTGVLLLLTAPRWRVVLGILVAALPLPAAYQIFRMGYYGLMVPHTAVAKSASDAVWGTGWEYVEDFTGPYNLW LGLALLLAAGALTVWKTDKHLAIPKGRLGVRTPGMAIALLVICALVHFLYVIRVGGDFMHGRMLLLPLFAILLPVSVIPV NVVDRGWQDLVALVLVFSTWVWSTVVFVQGHQWENTGQHVVDERDFWIDFTNRDEDHPPLYAEDFLTVDSMNDYAEVMRD QTLVNPTGQQLNILASSDPTTYSWITTPRVEGVEAGDLANLSPTVFHVNLGMTSMNAPLNVRVTDLIGLATPLAARQPRI EGGRIGHDKLMDLEWQVAESATPLAYTPGWLDTQKTYEARQALRHPELVHLFQTYREPMSYHRFVDNIKYALTTGRTLEI SDNPEDLLKEFNPTPAEIQDGLETIAWPGEIKLDEPRGEPLYSSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75827; Mature: 75696
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSPQRPEFETGKQPDPETEHAGDFFEETSSSAPRAASNGSSGPNYTLITTFLAALTAG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IFAFWAGWTRKWISDDGLIVLRTVRNLLAGNGPVFNAGERVEANTSTLWQYCIYLVALVT HHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHH DYRLEDIALWLALLFTTAASIIGVLGTAHLHRKRIAVLLPAGVIGYFSLSPARDFATSGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCHHHHHHCCH EWGLSLMWISIQWLLLVLWATSGKTSGKKASGAKTSNPIVNAGAITYALAFWSGLSWLVR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCHHHHC PELAMYGGLTGVLLLLTAPRWRVVLGILVAALPLPAAYQIFRMGYYGLMVPHTAVAKSAS CHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHHCCCHHHHHCCCC DAVWGTGWEYVEDFTGPYNLWLGLALLLAAGALTVWKTDKHLAIPKGRLGVRTPGMAIAL CCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCHHHHHH LVICALVHFLYVIRVGGDFMHGRMLLLPLFAILLPVSVIPVNVVDRGWQDLVALVLVFST HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHHH WVWSTVVFVQGHQWENTGQHVVDERDFWIDFTNRDEDHPPLYAEDFLTVDSMNDYAEVMR HHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCEECCCCHHHHHHHH DQTLVNPTGQQLNILASSDPTTYSWITTPRVEGVEAGDLANLSPTVFHVNLGMTSMNAPL CCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEECCCCC NVRVTDLIGLATPLAARQPRIEGGRIGHDKLMDLEWQVAESATPLAYTPGWLDTQKTYEA EEEHHHHHHHHCCHHHCCCCCCCCCCCCHHHCCCEEEHHCCCCCCEECCCCCCCHHHHHH RQALRHPELVHLFQTYREPMSYHRFVDNIKYALTTGRTLEISDNPEDLLKEFNPTPAEIQ HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCHHHHHHHCCCCHHHHH DGLETIAWPGEIKLDEPRGEPLYSSQ HHHHHHCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure TFSPQRPEFETGKQPDPETEHAGDFFEETSSSAPRAASNGSSGPNYTLITTFLAALTAG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IFAFWAGWTRKWISDDGLIVLRTVRNLLAGNGPVFNAGERVEANTSTLWQYCIYLVALVT HHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHH DYRLEDIALWLALLFTTAASIIGVLGTAHLHRKRIAVLLPAGVIGYFSLSPARDFATSGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCHHHHHHCCH EWGLSLMWISIQWLLLVLWATSGKTSGKKASGAKTSNPIVNAGAITYALAFWSGLSWLVR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCHHHHC PELAMYGGLTGVLLLLTAPRWRVVLGILVAALPLPAAYQIFRMGYYGLMVPHTAVAKSAS CHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHHCCCHHHHHCCCC DAVWGTGWEYVEDFTGPYNLWLGLALLLAAGALTVWKTDKHLAIPKGRLGVRTPGMAIAL CCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCHHHHHH LVICALVHFLYVIRVGGDFMHGRMLLLPLFAILLPVSVIPVNVVDRGWQDLVALVLVFST HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHHH WVWSTVVFVQGHQWENTGQHVVDERDFWIDFTNRDEDHPPLYAEDFLTVDSMNDYAEVMR HHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCEECCCCHHHHHHHH DQTLVNPTGQQLNILASSDPTTYSWITTPRVEGVEAGDLANLSPTVFHVNLGMTSMNAPL CCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCEECCCCC NVRVTDLIGLATPLAARQPRIEGGRIGHDKLMDLEWQVAESATPLAYTPGWLDTQKTYEA EEEHHHHHHHHCCHHHCCCCCCCCCCCCHHHCCCEEEHHCCCCCCEECCCCCCCHHHHHH RQALRHPELVHLFQTYREPMSYHRFVDNIKYALTTGRTLEISDNPEDLLKEFNPTPAEIQ HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCHHHHHHHCCCCHHHHH DGLETIAWPGEIKLDEPRGEPLYSSQ HHHHHHCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA