| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is iunH1 [H]
Identifier: 62391672
GI number: 62391672
Start: 2996301
End: 2997206
Strand: Reverse
Name: iunH1 [H]
Synonym: cg3137
Alternate gene names: 62391672
Gene position: 2997206-2996301 (Counterclockwise)
Preceding gene: 62391676
Following gene: 62391671
Centisome position: 91.3
GC content: 52.54
Gene sequence:
>906_bases ATGATTCCTGTTCTCATCGACTGCGACACCGGCATCGACGACGCCCTCGCCCTGATCTACCTGGTTGCTTTGCATAAACG TGGTGAAATCCAACTTTTTGGAGCAACGACCACCGCAGGAAATGTTGATGTGAAACAAACCGCCATCAATACCAGGTGGG TGTTGGATCAGTGTGGATTAGCGGACATCCCGGTCCTCGCAGGACAACCTGAACCAAAGCACGTGCCGCTAGTGACTACT CCAGAAACACACGGCGACCATGGCCTTGGTTATATAAACCCAGGTCACGTCGAAATTCCAGAAGGTGACTGGAAGCAGCT GTGGAAAGAACACCTCAGTAACCCAGAAACTAAGCTGATTGTCACCGGGCCCGCCACCAACCTTGCGGAATTCGGGCCAG TGGAAAACGTCACGCTGATGGGTGGCACCTACCTTTATCCAGGCAACACCACTCCAACGGCAGAATGGAATACCTGGGTT GATCCACACGGAGCTAAAGAAGCATTCGCGGCAGCCCAAAAGCCCATTACGGTGTGTTCCTTGGGCGTGACCGAGCAGTT TACGCTGAACCCGGACATCCTTTCTACACTTATCAACACGCTTGGCAGCCAACCCATCGCAGAGCATTTACCTGAGATGC TGCGCTTTTACTTTGAATTTCACGAAGTGCAGGGCGAAGGTTACCTTGCTCAAATTCATGACCTGCTGACCTGCATGATT GCCTTGGATAAAATCCCATTTTCAGGCCGTGAAGTAACCGTGGACGTGGAGGCTGATTCGCCCTTGATGCGTGGCACCAC TGTTGCAGATATTCGCGGACATTGGGGCAAGCCAGCTAACGCATTTCTTGTGGAAACCGCAGACATTGAGGCCGCCCACG CGGAACTTCTAAGAGCAGTGGAATGA
Upstream 100 bases:
>100_bases TTAGTCCTCTATGGCAGCAAGCCTGCCAGAGGAGCCTATCCAGCACTAGACCCCAACTAGAACCCAACCCCAAAACCAGA AAACACTAAGCTCGTGAGAC
Downstream 100 bases:
>100_bases AATAATCCGGTGCTGATGCAGGGCAACTCGCTTAATCTGGCAGACAACAGCGAGAGAAAGAAGCCCATGCCGTCACCAGG AGAACTTTTAGCCGCCCGCT
Product: inosine-uridine preferring nucleoside hydrolase
Products: D-ribose; purine
Alternate protein names: Cytidine/uridine-specific hydrolase [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MIPVLIDCDTGIDDALALIYLVALHKRGEIQLFGATTTAGNVDVKQTAINTRWVLDQCGLADIPVLAGQPEPKHVPLVTT PETHGDHGLGYINPGHVEIPEGDWKQLWKEHLSNPETKLIVTGPATNLAEFGPVENVTLMGGTYLYPGNTTPTAEWNTWV DPHGAKEAFAAAQKPITVCSLGVTEQFTLNPDILSTLINTLGSQPIAEHLPEMLRFYFEFHEVQGEGYLAQIHDLLTCMI ALDKIPFSGREVTVDVEADSPLMRGTTVADIRGHWGKPANAFLVETADIEAAHAELLRAVE
Sequences:
>Translated_301_residues MIPVLIDCDTGIDDALALIYLVALHKRGEIQLFGATTTAGNVDVKQTAINTRWVLDQCGLADIPVLAGQPEPKHVPLVTT PETHGDHGLGYINPGHVEIPEGDWKQLWKEHLSNPETKLIVTGPATNLAEFGPVENVTLMGGTYLYPGNTTPTAEWNTWV DPHGAKEAFAAAQKPITVCSLGVTEQFTLNPDILSTLINTLGSQPIAEHLPEMLRFYFEFHEVQGEGYLAQIHDLLTCMI ALDKIPFSGREVTVDVEADSPLMRGTTVADIRGHWGKPANAFLVETADIEAAHAELLRAVE >Mature_301_residues MIPVLIDCDTGIDDALALIYLVALHKRGEIQLFGATTTAGNVDVKQTAINTRWVLDQCGLADIPVLAGQPEPKHVPLVTT PETHGDHGLGYINPGHVEIPEGDWKQLWKEHLSNPETKLIVTGPATNLAEFGPVENVTLMGGTYLYPGNTTPTAEWNTWV DPHGAKEAFAAAQKPITVCSLGVTEQFTLNPDILSTLINTLGSQPIAEHLPEMLRFYFEFHEVQGEGYLAQIHDLLTCMI ALDKIPFSGREVTVDVEADSPLMRGTTVADIRGHWGKPANAFLVETADIEAAHAELLRAVE
Specific function: Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively [H]
COG id: COG1957
COG function: function code F; Inosine-uridine nucleoside N-ribohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IUNH family. RihA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788486, Length=303, Percent_Identity=29.042904290429, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786871, Length=300, Percent_Identity=29, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786213, Length=280, Percent_Identity=33.5714285714286, Blast_Score=93, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320608, Length=262, Percent_Identity=27.0992366412214, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24641837, Length=196, Percent_Identity=31.6326530612245, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015910 - InterPro: IPR023186 - InterPro: IPR001910 - InterPro: IPR022975 [H]
Pfam domain/function: PF01156 IU_nuc_hydro [H]
EC number: 3.2.2.1
Molecular weight: Translated: 32753; Mature: 32753
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVLIDCDTGIDDALALIYLVALHKRGEIQLFGATTTAGNVDVKQTAINTRWVLDQCGL CCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHCCCEEEHHHCCC ADIPVLAGQPEPKHVPLVTTPETHGDHGLGYINPGHVEIPEGDWKQLWKEHLSNPETKLI CCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEE VTGPATNLAEFGPVENVTLMGGTYLYPGNTTPTAEWNTWVDPHGAKEAFAAAQKPITVCS EECCCCCHHHCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEE LGVTEQFTLNPDILSTLINTLGSQPIAEHLPEMLRFYFEFHEVQGEGYLAQIHDLLTCMI CCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALDKIPFSGREVTVDVEADSPLMRGTTVADIRGHWGKPANAFLVETADIEAAHAELLRAV HHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHC E C >Mature Secondary Structure MIPVLIDCDTGIDDALALIYLVALHKRGEIQLFGATTTAGNVDVKQTAINTRWVLDQCGL CCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHCCCEEEHHHCCC ADIPVLAGQPEPKHVPLVTTPETHGDHGLGYINPGHVEIPEGDWKQLWKEHLSNPETKLI CCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEE VTGPATNLAEFGPVENVTLMGGTYLYPGNTTPTAEWNTWVDPHGAKEAFAAAQKPITVCS EECCCCCHHHCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEE LGVTEQFTLNPDILSTLINTLGSQPIAEHLPEMLRFYFEFHEVQGEGYLAQIHDLLTCMI CCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALDKIPFSGREVTVDVEADSPLMRGTTVADIRGHWGKPANAFLVETADIEAAHAELLRAV HHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-D-ribosylpurine; H2O
Specific reaction: an N-D-ribosylpurine + H2O = D-ribose + a purine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA