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The map label for this gene is yafV [C]

Identifier: 62391628

GI number: 62391628

Start: 2951150

End: 2951950

Strand: Reverse

Name: yafV [C]

Synonym: cg3093

Alternate gene names: 62391628

Gene position: 2951950-2951150 (Counterclockwise)

Preceding gene: 62391631

Following gene: 62391622

Centisome position: 89.92

GC content: 52.56

Gene sequence:

>801_bases
ATGCGTATTGCCTTGCTTCAGATCTCGACGAATTCCGATAAGATGGACAACTTCGCCCTGCTGCGTGATGCTGCTGAAAA
AGCTGCGGAACAGGGGGCTCGGGTGTTGGTGTTTCCGGAGGCGACTTCGCAAAGCTTTGGTACGGGAAGGCTTGATACTC
AGGCGGAGGAGCTCGATGGCGAATTCTCCACCGCGGTACGAAAATTAGCCGATGAGCTGGACGTTGTCATCGTTGCGGGC
ATGTTCACCCCTGCTGACACCGTGCAGCGCGGTGAAAAAACGATCTCGCGCGTCAACAACACCGTGCTGATTAGTGGCGC
TGGATTGCATCAGGGATACAACAAAATTCACACATATGACGCGTTCGGTTATAGGGAATCCGACACTGTGAAACCGGGCG
ATGAGCTGGTTGTATTCGAGGTCGACGATATTAAATTTGGTGTGGCGACATGCTACGATATTCGATTCCCAGAACAGTTC
AAAGACCTCGCCCGCAACGGTGCACAGATAATTGTGGTTCCCACGTCGTGGCAAGACGGTCCTGGAAAATTAGAACAATG
GGAAGTCCTCCCTCGCGCGCGTGCACTGGATTCCACCTGCTGGATCGTAGCGTGTGGGCAAGCGCGACTTCCAGAAGAAT
TACGCGATGAACGAAAAGGCCCTACGGGGATTGGTCATTCCATGGTGACAAACCCACACGGTGAAGTAATTGCTAGCGCG
GGTTATGAGCCAGAAATGTTGATCGCGGATATTGATGTCAGCGGTTTGGCCAAAATTCGGGAGGCATTGCCTGTTCTTTA
A

Upstream 100 bases:

>100_bases
AGGTACATGCTGCTGATTCAAGTGGTTTTTACGATGCTGGGCAAGAAGTGATCACGCGAACCTGTGTATAACTTGCCTCA
AAGCGCCTAGGCTGTGGATT

Downstream 100 bases:

>100_bases
CCACTGTCTAAGGAATCACTCGTTGGGCACGTCGGCGCTTCTGATTGGTCAGCCCGGTGAGGCAACCTAGAACCCTAAAA
TCTCAATCTGCTGGGCCGGA

Product: carbon-nitrogen hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDGEFSTAVRKLADELDVVIVAG
MFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYDAFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQF
KDLARNGAQIIVVPTSWQDGPGKLEQWEVLPRARALDSTCWIVACGQARLPEELRDERKGPTGIGHSMVTNPHGEVIASA
GYEPEMLIADIDVSGLAKIREALPVL

Sequences:

>Translated_266_residues
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDGEFSTAVRKLADELDVVIVAG
MFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYDAFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQF
KDLARNGAQIIVVPTSWQDGPGKLEQWEVLPRARALDSTCWIVACGQARLPEELRDERKGPTGIGHSMVTNPHGEVIASA
GYEPEMLIADIDVSGLAKIREALPVL
>Mature_266_residues
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDGEFSTAVRKLADELDVVIVAG
MFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYDAFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQF
KDLARNGAQIIVVPTSWQDGPGKLEQWEVLPRARALDSTCWIVACGQARLPEELRDERKGPTGIGHSMVTNPHGEVIASA
GYEPEMLIADIDVSGLAKIREALPVL

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=275, Percent_Identity=31.2727272727273, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI5031947, Length=272, Percent_Identity=31.6176470588235, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI297632350, Length=274, Percent_Identity=31.7518248175182, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI297632348, Length=274, Percent_Identity=31.7518248175182, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17556280, Length=274, Percent_Identity=28.8321167883212, Blast_Score=104, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6323383, Length=278, Percent_Identity=28.7769784172662, Blast_Score=122, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6322335, Length=295, Percent_Identity=29.8305084745763, Blast_Score=107, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21355835, Length=274, Percent_Identity=32.1167883211679, Blast_Score=124, Evalue=8e-29,
Organism=Drosophila melanogaster, GI17933642, Length=276, Percent_Identity=32.6086956521739, Blast_Score=106, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 29079; Mature: 29079

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDG
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCC
EFSTAVRKLADELDVVIVAGMFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYD
HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHEEEE
AFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQFKDLARNGAQIIVVPTSWQDG
CCCCCCCCCCCCCCCEEEEEECCCEECEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCC
PGKLEQWEVLPRARALDSTCWIVACGQARLPEELRDERKGPTGIGHSMVTNPHGEVIASA
CCCCHHHHHCHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCEECCCCCEEECC
GYEPEMLIADIDVSGLAKIREALPVL
CCCCCEEEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDG
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCC
EFSTAVRKLADELDVVIVAGMFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYD
HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHEEEE
AFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQFKDLARNGAQIIVVPTSWQDG
CCCCCCCCCCCCCCCEEEEEECCCEECEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCC
PGKLEQWEVLPRARALDSTCWIVACGQARLPEELRDERKGPTGIGHSMVTNPHGEVIASA
CCCCHHHHHCHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCEECCCCCEEECC
GYEPEMLIADIDVSGLAKIREALPVL
CCCCCEEEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]