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The map label for this gene is yfdZ [C]

Identifier: 62391438

GI number: 62391438

Start: 2738284

End: 2739435

Strand: Reverse

Name: yfdZ [C]

Synonym: cg2877

Alternate gene names: 62391438

Gene position: 2739435-2738284 (Counterclockwise)

Preceding gene: 62391439

Following gene: 62391437

Centisome position: 83.45

GC content: 54.77

Gene sequence:

>1152_bases
ATGAAGCCAAGCACTAGAAGCAATGTTCAGCCGTTTCGCGTCATGCAGATGTTGGACCGAGTCCACCGTCGCAGGCGCGA
AGGCAAAGACACCTTAATGTTCTGCGCTGGCCAGCCGTCAACTGGTGCGCCAGAAGCAGTCATCGAAGAAGCAGAGATCG
CTCTTCGCTCGGGTCCTTTGGGATACACCGAGGTGATTGGTGATCGTGAGTTCCGTGAACGCATCGCCGATTGGCACTCT
GCTACTTATGACGTAGACACCAACCCTGACAATGTTATTGTCACCACCGGTTCTTCAGGTGGATTCGTGGCATCGTTTAT
CGCCACCTTGGATCACGGGGATTATGTGGCAATGCCTACCCCGGGGTACCCGGCATATCGCAATATTCTGGAATCTTTGG
GGGCGAAGGTTCTGAACCTGCGCTGTACTGCAGAGACTCGTTTCCAGCCAACCGCTCAAATGTTGGAGGAACTGCCACAC
AAGCCGAAGGCTGTTATTGTCACCAGCCCAGGAAACCCAACGGGCACCATCATTGATCCGGAAGAGCTAGAGCGCATCGC
CAAGTGGTGCGATGACAATGATGCTGTTCTTATCTCTGATGAGGACTACCACGGCATGAGCTTTGGTCGTCCGCTGGCAA
CTGCGCATCAGTTTTCCAAGAACGCCATCGTGGTGGGTACCTTGTCCAAGTACTTCTCCATGACGGGTTGGCGCGTGGGT
TGGATCATCGTTCCAGATGAGCTGGTCACACCGATTGAAAACCTGCAGGCTTCTCTTTCCTTGTGTGCTCCTGCCATCGG
GCAGGCTGCGGGACGCGCAGCCTTCACTTTGGAGGCTGGGGCCGAACTTGATGCCCACGTTGAAGCGTATCGCGAGGCCC
GGGAGGTGTTCGTCGATAAGCTCCCTGAAATCGGGCTTGGCACTTTCGCCGACCCGGATGGCGGCCTGTATTTGTGGGTC
GATGTTTCTGCATACACCGATGATTCAGAGGAATGGGCATTGCGTTTGCTCGATGAAGCGGGCGTGGCCGTCGCGCCGGG
TGTTGATTTTGATCCTGAGGAAGGCCACAAGTGGATTCGTTTGAGCCTGTGCGCGTCAAAGGAAGACACCATTGAAGGTG
TGCGCAAAATCGGAGAATTCATCAAAAAATAG

Upstream 100 bases:

>100_bases
ATTGAACTTGAGGGAAGCCACTACCGCAGCGATATCGCATTGGCTGCATTAGAGGGTCGTATCTCGATCTAAAAGCAGTA
CGCAGATAGGCTTGTCTCTT

Downstream 100 bases:

>100_bases
CAGCGACTAGGTTAGTTTCGGTTCGTGGGGAATAATAATTTGCGTGGCTGATAAAAAGAAGATCGCAAACGTCCTGTCGA
ACCGTTACGCCTCCGCGGAA

Product: aminotransferase class I protein

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRSGPLGYTEVIGDREFRERIADWHS
ATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVAMPTPGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEELPH
KPKAVIVTSPGNPTGTIIDPEELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGWRVG
WIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVFVDKLPEIGLGTFADPDGGLYLWV
DVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHKWIRLSLCASKEDTIEGVRKIGEFIKK

Sequences:

>Translated_383_residues
MKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRSGPLGYTEVIGDREFRERIADWHS
ATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVAMPTPGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEELPH
KPKAVIVTSPGNPTGTIIDPEELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGWRVG
WIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVFVDKLPEIGLGTFADPDGGLYLWV
DVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHKWIRLSLCASKEDTIEGVRKIGEFIKK
>Mature_383_residues
MKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRSGPLGYTEVIGDREFRERIADWHS
ATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVAMPTPGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEELPH
KPKAVIVTSPGNPTGTIIDPEELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGWRVG
WIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVFVDKLPEIGLGTFADPDGGLYLWV
DVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHKWIRLSLCASKEDTIEGVRKIGEFIKK

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713254, Length=310, Percent_Identity=26.7741935483871, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI56713256, Length=310, Percent_Identity=26.7741935483871, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI95147551, Length=321, Percent_Identity=23.6760124610592, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI169881279, Length=321, Percent_Identity=23.6760124610592, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4507369, Length=408, Percent_Identity=24.2647058823529, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI169881281, Length=175, Percent_Identity=27.4285714285714, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI1788722, Length=367, Percent_Identity=28.3378746594005, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1786816, Length=346, Percent_Identity=28.0346820809249, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788627, Length=352, Percent_Identity=23.0113636363636, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790797, Length=346, Percent_Identity=25.1445086705202, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787710, Length=335, Percent_Identity=24.1791044776119, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1787909, Length=361, Percent_Identity=24.3767313019391, Blast_Score=65, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=312, Percent_Identity=26.2820512820513, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71994476, Length=312, Percent_Identity=26.2820512820513, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17567663, Length=398, Percent_Identity=24.6231155778894, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17567369, Length=383, Percent_Identity=22.1932114882507, Blast_Score=92, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6322401, Length=395, Percent_Identity=24.3037974683544, Blast_Score=110, Evalue=3e-25,
Organism=Drosophila melanogaster, GI28573069, Length=313, Percent_Identity=26.517571884984, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24646114, Length=313, Percent_Identity=26.517571884984, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28573067, Length=313, Percent_Identity=26.517571884984, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28573065, Length=313, Percent_Identity=26.517571884984, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI18859735, Length=391, Percent_Identity=21.7391304347826, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42044; Mature: 42044

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRSGPL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
GYTEVIGDREFRERIADWHSATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVAMPT
CHHHHHCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECC
PGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEELPHKPKAVIVTSPGNPTGTIIDP
CCCHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEECH
EELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGWRVG
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEHHHHHCCCCCEEE
WIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVFVDK
EEEECHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
LPEIGLGTFADPDGGLYLWVDVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHKWIR
CCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEE
LSLCASKEDTIEGVRKIGEFIKK
EEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRSGPL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
GYTEVIGDREFRERIADWHSATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVAMPT
CHHHHHCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECC
PGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEELPHKPKAVIVTSPGNPTGTIIDP
CCCHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEECH
EELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGWRVG
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEHHHHHCCCCCEEE
WIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVFVDK
EEEECHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
LPEIGLGTFADPDGGLYLWVDVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHKWIR
CCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEE
LSLCASKEDTIEGVRKIGEFIKK
EEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]