Click here to switch to the map view.

The map label for this gene is dppC [H]

Identifier: 62391277

GI number: 62391277

Start: 2550552

End: 2551436

Strand: Reverse

Name: dppC [H]

Synonym: cg2676

Alternate gene names: 62391277

Gene position: 2551436-2550552 (Counterclockwise)

Preceding gene: 62391278

Following gene: 62391276

Centisome position: 77.72

GC content: 56.61

Gene sequence:

>885_bases
ATGAGTAATCCTCCTATTTCACCCAAAAAACCGGTATCCGCTAATCCTCGAACTGGATCCGCTGACCCGGCACGCAAGCG
TAAAGCGTTGGGCAATCCTTGGACGAGGCCTGCTGCTGTTATTTCCATCGTGGTACTCGCCGTTGCGGTGCTGATGGCAC
TTGTTCCTGGACTGTTTACCTCCCAGGATCCGTTCACTGGCGATGATGTGGCGCTGCTTGGGCCAAGTGGCACCCACTGG
TTTGGTACCGATTCCGTGGGACGCGATCTCTACAGTCGTGTTGTTTACGGCGCGAGGGAAACCCTGCTCGGTGCACTGAT
CGCAGTGCTGGTTGGTCTGATCGTGGGAACCCTGATCGGACTGCTCGCAGGTGCACAGCGCGGTTGGGTTGACACTGTAT
TAATGCGTTTCGTGGATGTGCTGTTGTCCATCCCGGCACTGCTGCTCAGCTTGACTGTCATTATCCTTTTGGGATTCGGC
ACCATGAACGCAGCGATCGCAGTCGGTATTACCTCTGTTGCCACCTTCGCGCGTCTGGCGCGTTCCCAGGTGATGACTGT
TGCAGGTTCCGATTTCGTGGAAGCTGCATACGGTTCCGGTGGCACCCAGGCGCAGGTGTTGTTCCGCCACATTCTGCCTA
ACTCTCTGACCCCAGTGTTTGCTCTTGCAGCACTGCAGTTCGGTTCCGCGATTTTGCAGCTGTCCGTGTTGGGCTTCTTG
GGCTACGGCGCTCCGGCACCAACACCAGAGTGGGGTCTGCTGATCTCTGATGCCCGCGACTACATGGCGACCTCATGGTG
GCTGACTGTGCTGCCTGGTTTTGTCATCATCGCCGTGGTTATGTCTGCCAACTACCTAAGCCGCATCATTCAGAAGGAGG
CATAG

Upstream 100 bases:

>100_bases
TGATCGCAGCTGCTGTTTATGTTTTGATCAACCTCATCGTGGATTTGTTGTACCCAGTCCTCGATGCCCGTCTGCGCCGC
AGGGAAAGGGCATAAGACTC

Downstream 100 bases:

>100_bases
AAAATGACTACTCCCTTGTTAGAGATCAACGATCTGGTTGTCTCCTATCAAACTGCTAAAGGTTTGGTGCATGCTGTCAA
CAATGTCAGCCTGGAGGTGC

Product: ABC-type dipeptide/oligopeptide/nickel transport systems, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSNPPISPKKPVSANPRTGSADPARKRKALGNPWTRPAAVISIVVLAVAVLMALVPGLFTSQDPFTGDDVALLGPSGTHW
FGTDSVGRDLYSRVVYGARETLLGALIAVLVGLIVGTLIGLLAGAQRGWVDTVLMRFVDVLLSIPALLLSLTVIILLGFG
TMNAAIAVGITSVATFARLARSQVMTVAGSDFVEAAYGSGGTQAQVLFRHILPNSLTPVFALAALQFGSAILQLSVLGFL
GYGAPAPTPEWGLLISDARDYMATSWWLTVLPGFVIIAVVMSANYLSRIIQKEA

Sequences:

>Translated_294_residues
MSNPPISPKKPVSANPRTGSADPARKRKALGNPWTRPAAVISIVVLAVAVLMALVPGLFTSQDPFTGDDVALLGPSGTHW
FGTDSVGRDLYSRVVYGARETLLGALIAVLVGLIVGTLIGLLAGAQRGWVDTVLMRFVDVLLSIPALLLSLTVIILLGFG
TMNAAIAVGITSVATFARLARSQVMTVAGSDFVEAAYGSGGTQAQVLFRHILPNSLTPVFALAALQFGSAILQLSVLGFL
GYGAPAPTPEWGLLISDARDYMATSWWLTVLPGFVIIAVVMSANYLSRIIQKEA
>Mature_293_residues
SNPPISPKKPVSANPRTGSADPARKRKALGNPWTRPAAVISIVVLAVAVLMALVPGLFTSQDPFTGDDVALLGPSGTHWF
GTDSVGRDLYSRVVYGARETLLGALIAVLVGLIVGTLIGLLAGAQRGWVDTVLMRFVDVLLSIPALLLSLTVIILLGFGT
MNAAIAVGITSVATFARLARSQVMTVAGSDFVEAAYGSGGTQAQVLFRHILPNSLTPVFALAALQFGSAILQLSVLGFLG
YGAPAPTPEWGLLISDARDYMATSWWLTVLPGFVIIAVVMSANYLSRIIQKEA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=249, Percent_Identity=38.5542168674699, Blast_Score=184, Evalue=7e-48,
Organism=Escherichia coli, GI1787054, Length=248, Percent_Identity=38.3064516129032, Blast_Score=178, Evalue=4e-46,
Organism=Escherichia coli, GI1789964, Length=213, Percent_Identity=40.3755868544601, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1789889, Length=222, Percent_Identity=34.2342342342342, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1787498, Length=266, Percent_Identity=34.9624060150376, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787549, Length=215, Percent_Identity=32.5581395348837, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788505, Length=264, Percent_Identity=26.8939393939394, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30842; Mature: 30710

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPPISPKKPVSANPRTGSADPARKRKALGNPWTRPAAVISIVVLAVAVLMALVPGLFT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SQDPFTGDDVALLGPSGTHWFGTDSVGRDLYSRVVYGARETLLGALIAVLVGLIVGTLIG
CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAGAQRGWVDTVLMRFVDVLLSIPALLLSLTVIILLGFGTMNAAIAVGITSVATFARLA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RSQVMTVAGSDFVEAAYGSGGTQAQVLFRHILPNSLTPVFALAALQFGSAILQLSVLGFL
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GYGAPAPTPEWGLLISDARDYMATSWWLTVLPGFVIIAVVMSANYLSRIIQKEA
HCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNPPISPKKPVSANPRTGSADPARKRKALGNPWTRPAAVISIVVLAVAVLMALVPGLFT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SQDPFTGDDVALLGPSGTHWFGTDSVGRDLYSRVVYGARETLLGALIAVLVGLIVGTLIG
CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAGAQRGWVDTVLMRFVDVLLSIPALLLSLTVIILLGFGTMNAAIAVGITSVATFARLA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RSQVMTVAGSDFVEAAYGSGGTQAQVLFRHILPNSLTPVFALAALQFGSAILQLSVLGFL
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GYGAPAPTPEWGLLISDARDYMATSWWLTVLPGFVIIAVVMSANYLSRIIQKEA
HCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]