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The map label for this gene is crtB [H]

Identifier: 62391273

GI number: 62391273

Start: 2545516

End: 2546379

Strand: Reverse

Name: crtB [H]

Synonym: cg2672

Alternate gene names: 62391273

Gene position: 2546379-2545516 (Counterclockwise)

Preceding gene: 62391274

Following gene: 62391272

Centisome position: 77.57

GC content: 53.94

Gene sequence:

>864_bases
GTGGCTGATCAGCAAGATTTTTTGGGCCGTTTTGATGCGATGAGCTCAAAGGCGACGGCCACGGTAATCGCCCATTATTC
CTCCAGTTTTACTCTGGCATCGAAGCTGTTGTCGCCGAAAATTCGTCGCGATATTGAGGCATTGTACGCAATGGTGCGAG
TGGCCGATGAGGTTGTGGACGGCGCTGCTGCTGCCGCGGGGTGTGCGCCGGACGCCGTTGCGGAGATTTTGGACAATTAC
GAACGCCAGGTTCTGCTCAGTTTGTCCGTTCCTTTTCATACCGATCCAGTGATCCATGCGTTTGGCAATACCGCCCGCAA
ATGTGGTTTTGAGCAGGCTCACATCGTGGCGTTTTTTGATTCCATGCGCCGCGATCTCTCCCAAACCTCCTATGATCCGA
CTCAGTTGGATGAGTACATTTACGGCTCCGCTGAGGTCATCGGGTTGATGTGTTTGAAAATTTTCCTCCAAGATTCCACT
GCCAGCCCGCAGGATCGGGCCACGATGGAACACGGCGCCAGGCGTTTGGGTGCGGCATTTCAAAAGGTAAATTTCCTGCG
AGATCTAGCTGAAGACCGCGAAGGCCTAGGCCGTTCTTATTTGCCGGTATTCACCGAAGAAATGCGCGATGAGATCGTTA
CTGATATCCGAGAGGATTTGGATGCCGCCCGGCTGAGCATTCCGCTGCTGCCATTTGGCGCGCGAACCGGTGTGCGCGCC
GCGACCGATCTCTACGGTTGCCTCGTGGACAACCTGGAATCCGCGTCCCTCGAAGACTTAAAAAACGGGCGGATTCGGGT
GCCGTCTATGAAAAAAGCCAGCCTGGCAACCAAAGCAATGTGGAAAGAAGTGTTTCAAAAATGA

Upstream 100 bases:

>100_bases
AACCCGCAGCGGGTGGAGCGGGGCTGAGGGAGACGTCGAGAAGCGTCCCTTTCGGTTGTCTGGATTTCTCGCGGTAAAGT
TTCCTGTGAAGGAGGCGAGT

Downstream 100 bases:

>100_bases
CAAAAGCAGTGGTCATCGGCGGGGGACTAGCAGGACTAGCCACCACCGCACTGCTCTTACGCGAAGGATATGAAGTCCAC
CTCGTCGAACAAAACGAGCA

Product: phytoene synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MADQQDFLGRFDAMSSKATATVIAHYSSSFTLASKLLSPKIRRDIEALYAMVRVADEVVDGAAAAAGCAPDAVAEILDNY
ERQVLLSLSVPFHTDPVIHAFGNTARKCGFEQAHIVAFFDSMRRDLSQTSYDPTQLDEYIYGSAEVIGLMCLKIFLQDST
ASPQDRATMEHGARRLGAAFQKVNFLRDLAEDREGLGRSYLPVFTEEMRDEIVTDIREDLDAARLSIPLLPFGARTGVRA
ATDLYGCLVDNLESASLEDLKNGRIRVPSMKKASLATKAMWKEVFQK

Sequences:

>Translated_287_residues
MADQQDFLGRFDAMSSKATATVIAHYSSSFTLASKLLSPKIRRDIEALYAMVRVADEVVDGAAAAAGCAPDAVAEILDNY
ERQVLLSLSVPFHTDPVIHAFGNTARKCGFEQAHIVAFFDSMRRDLSQTSYDPTQLDEYIYGSAEVIGLMCLKIFLQDST
ASPQDRATMEHGARRLGAAFQKVNFLRDLAEDREGLGRSYLPVFTEEMRDEIVTDIREDLDAARLSIPLLPFGARTGVRA
ATDLYGCLVDNLESASLEDLKNGRIRVPSMKKASLATKAMWKEVFQK
>Mature_286_residues
ADQQDFLGRFDAMSSKATATVIAHYSSSFTLASKLLSPKIRRDIEALYAMVRVADEVVDGAAAAAGCAPDAVAEILDNYE
RQVLLSLSVPFHTDPVIHAFGNTARKCGFEQAHIVAFFDSMRRDLSQTSYDPTQLDEYIYGSAEVIGLMCLKIFLQDSTA
SPQDRATMEHGARRLGAAFQKVNFLRDLAEDREGLGRSYLPVFTEEMRDEIVTDIREDLDAARLSIPLLPFGARTGVRAA
TDLYGCLVDNLESASLEDLKNGRIRVPSMKKASLATKAMWKEVFQK

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 31714; Mature: 31583

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQQDFLGRFDAMSSKATATVIAHYSSSFTLASKLLSPKIRRDIEALYAMVRVADEVVD
CCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
GAAAAAGCAPDAVAEILDNYERQVLLSLSVPFHTDPVIHAFGNTARKCGFEQAHIVAFFD
HHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHH
SMRRDLSQTSYDPTQLDEYIYGSAEVIGLMCLKIFLQDSTASPQDRATMEHGARRLGAAF
HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QKVNFLRDLAEDREGLGRSYLPVFTEEMRDEIVTDIREDLDAARLSIPLLPFGARTGVRA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
ATDLYGCLVDNLESASLEDLKNGRIRVPSMKKASLATKAMWKEVFQK
HHHHHHHHHHCCCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADQQDFLGRFDAMSSKATATVIAHYSSSFTLASKLLSPKIRRDIEALYAMVRVADEVVD
CCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
GAAAAAGCAPDAVAEILDNYERQVLLSLSVPFHTDPVIHAFGNTARKCGFEQAHIVAFFD
HHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHH
SMRRDLSQTSYDPTQLDEYIYGSAEVIGLMCLKIFLQDSTASPQDRATMEHGARRLGAAF
HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QKVNFLRDLAEDREGLGRSYLPVFTEEMRDEIVTDIREDLDAARLSIPLLPFGARTGVRA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
ATDLYGCLVDNLESASLEDLKNGRIRVPSMKKASLATKAMWKEVFQK
HHHHHHHHHHCCCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8917308 [H]