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The map label for this gene is dctM [H]

Identifier: 62391181

GI number: 62391181

Start: 2451572

End: 2452885

Strand: Reverse

Name: dctM [H]

Synonym: cg2568

Alternate gene names: 62391181

Gene position: 2452885-2451572 (Counterclockwise)

Preceding gene: 62391182

Following gene: 62391177

Centisome position: 74.72

GC content: 52.89

Gene sequence:

>1314_bases
ATGTTGTCGCCAGCAGCTGTAGCAGCTTTAATTCTTGTCATCGGCATTGTGGTGCTCATCATCGCATCAGTGCCCGTTGC
CATTGCCATCGGTTTGCCATCACTTTTTGCCGCGATGGCCGTGCTTGGCCCAGAAAACGCCGCGCAGGCCGTCGCGCAGC
GCATGTTTACCGGCACAAACTCCTTTACACTCCTTGCCATTCCGTTCTTCGTGTTGGCGGGTTTGCTGATGAACTCGGGT
GGTATTGCCACGCGGCTTATCGACGCCGCGAAGGTGCTTGTCGGCCGCATGCCTGCCTCCATGGCCAATACGAATATCGC
AGCAAATGGTCTCTTCGGAGCAGTTTCAGGGGCAGCGGTAGCATCAGCTTCTGCCGTGGGAACCGTCATGACACCAAAAA
TGAAGGAAGAGGGCTACTCGCGCGCTTACGCAGCGGCCGTCAACGTGGCTTCAGCACCTGCGGGCATGCTGATCCCGCCA
TCAAACACTTTTATTGTGTATTCCTTGGTGTCCTCGACATCAATTGCAGCACTATTTATGGCCGGTGTTGGACCCGGTCT
GCTCTGGATTCTGGCCTGTGTCATCGTGGGAACTTGGTTAGCGCGAAAGGAAAACTACAAGCGCGAGCAGATTCATCCAA
CATTCAAGCAGTCGCTCGTTGTGCTGTGGAGGGCGCTGCCTTCACTGCTCATGATCGTCATTGTTGTTGGAGGTATCTTG
CTGGGCTGGTTCACTCCAACTGAATCCGCTGCTATTGCTGTAGTGTACTGCCTGGTCTTGGGCTTTATTTACCGCACAAT
CAAGGTGGGAGATCTGGCAGATATTTTGCTCAAGGCAACTCGCACCACATCAATTGTCATGTTGCTCATTGCAGTTTCTG
CAGCACTGTCGTGGGTGATGGCCTTTGCCAAGATCCCTCAGATGATCTCTGATGCGCTTCTTTCGGTATCCGATTCCAAG
GTTGTCATCTTGTTGATCATGATGTTCATCCTGTTACTCATCGGTACCGTAATGGACCCAACACCAGCAATTTTGATCTT
CGTCCCGATCTTCCTTCCAGTGGTTACCGAACTTGGTGTGGACCCAGTCCACTTCGGTGCGATGGTGGTAATGAACCTGT
CCGTGGGCGTGATTACCCCACCAGTAGGCAACGTGTTGTTCGTTGGTTCGCAAGTGGCAGGGCTGCGTGTGGAAACTGTG
ATCAGACGACTGTGGCCGTATCTCATTGCCATTATTGTTGCGCTGTTCGTGGTTGTTTTCGTACCGCAGATCTCTATCTG
GCTGCCCACAACAATGGGATTGATGGGAGGCTAA

Upstream 100 bases:

>100_bases
TACCCCCTTGTTGATGAATCAGAAGAACCTCGAGATTTGGACGAGCTAGAGGCCCAAAGCGCTATAGATTCTGCAAGTTC
AGCGGAAGGTAGGAACTAAT

Downstream 100 bases:

>100_bases
ACCTCCAGCCATCAGCTAAGAAACCGCCACCGCTGTACCTCGACGAGAGGGGAGCGATGGCGGTTTTCTTTTTGCACGAA
AGGAATGCCAACATGGCTTT

Product: C4-dicarboxylate transport system (permease large protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTNSFTLLAIPFFVLAGLLMNSG
GIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAVASASAVGTVMTPKMKEEGYSRAYAAAVNVASAPAGMLIPP
SNTFIVYSLVSSTSIAALFMAGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVMAFAKIPQMISDALLSVSDSK
VVILLIMMFILLLIGTVMDPTPAILIFVPIFLPVVTELGVDPVHFGAMVVMNLSVGVITPPVGNVLFVGSQVAGLRVETV
IRRLWPYLIAIIVALFVVVFVPQISIWLPTTMGLMGG

Sequences:

>Translated_437_residues
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTNSFTLLAIPFFVLAGLLMNSG
GIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAVASASAVGTVMTPKMKEEGYSRAYAAAVNVASAPAGMLIPP
SNTFIVYSLVSSTSIAALFMAGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVMAFAKIPQMISDALLSVSDSK
VVILLIMMFILLLIGTVMDPTPAILIFVPIFLPVVTELGVDPVHFGAMVVMNLSVGVITPPVGNVLFVGSQVAGLRVETV
IRRLWPYLIAIIVALFVVVFVPQISIWLPTTMGLMGG
>Mature_437_residues
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTNSFTLLAIPFFVLAGLLMNSG
GIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAVASASAVGTVMTPKMKEEGYSRAYAAAVNVASAPAGMLIPP
SNTFIVYSLVSSTSIAALFMAGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVMAFAKIPQMISDALLSVSDSK
VVILLIMMFILLLIGTVMDPTPAILIFVPIFLPVVTELGVDPVHFGAMVVMNLSVGVITPPVGNVLFVGSQVAGLRVETV
IRRLWPYLIAIIVALFVVVFVPQISIWLPTTMGLMGG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=383, Percent_Identity=38.3812010443864, Blast_Score=235, Evalue=4e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45754; Mature: 45754

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
SFTLLAIPFFVLAGLLMNSGGIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAV
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHH
ASASAVGTVMTPKMKEEGYSRAYAAAVNVASAPAGMLIPPSNTFIVYSLVSSTSIAALFM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEHHHHHHHHHHHH
AGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
HCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVM
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAKIPQMISDALLSVSDSKVVILLIMMFILLLIGTVMDPTPAILIFVPIFLPVVTELGV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
DPVHFGAMVVMNLSVGVITPPVGNVLFVGSQVAGLRVETVIRRLWPYLIAIIVALFVVVF
CHHHHHHHHHHHCCCCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VPQISIWLPTTMGLMGG
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
SFTLLAIPFFVLAGLLMNSGGIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAV
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHH
ASASAVGTVMTPKMKEEGYSRAYAAAVNVASAPAGMLIPPSNTFIVYSLVSSTSIAALFM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEHHHHHHHHHHHH
AGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
HCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVM
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAKIPQMISDALLSVSDSKVVILLIMMFILLLIGTVMDPTPAILIFVPIFLPVVTELGV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
DPVHFGAMVVMNLSVGVITPPVGNVLFVGSQVAGLRVETVIRRLWPYLIAIIVALFVVVF
CHHHHHHHHHHHCCCCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VPQISIWLPTTMGLMGG
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]