| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is mraW [H]
Identifier: 62391005
GI number: 62391005
Start: 2265786
End: 2266799
Strand: Reverse
Name: mraW [H]
Synonym: cg2377
Alternate gene names: 62391005
Gene position: 2266799-2265786 (Counterclockwise)
Preceding gene: 62391006
Following gene: 62391004
Centisome position: 69.05
GC content: 55.13
Gene sequence:
>1014_bases ATGGAAGATTTTTCCTTGGATGGCAACCACGGACACGTTCCCGTAATGCGTGATCGTATGGCGGCTTTGATCGCCGAACA CGTGGAAGCATTGGGAGAAAACGCTGTCATTGTTGACGCAACCCTTGGCGCAGGCGGGCATGCGGAGTTCTTCCTGAACA CGTTCCCCAAAGCGCGCCTGATTGGCCTTGATCGTGACCAAAATGCGTTGCGGGATGCTCGCGCGCGACTTGCTCCTTTC GGGGAGCGGTTCATTGGCGTCCAGACGCGTTTCGACGGACTCCGCGAGGTGTTGGAATCTGTCGAGGGCGACATCATTGA TTTAGCTCGCGAGCACGGTATCGCTGGCGCTCTGTTTGATCTGGGTGTCTCCTCGATGCAGCTTGATCAGGTGGAGCGTG GCTTTGCCTACCGCACGGACGCGCCTCTGGACATGCGCATGGATGCAACTCAGGGTATTACGGCTGCAGATATCCTCAAC ACTTATTCGCATGGTGACATCGCTCGAATCTTGAAGACTTACGGCGATGAACGCTTCGCCGGCAAGATTGCTTCTGCGGT GCTGAAAGAACGTGAAAAAGAGCCGTTCACTACCTCTGCTCGTTTGGTGGAGCTTCTGTACGACGCCATCCCTGCAGCGA CCCGCCGAACCGGTGGACACCCCGCGAAACGTACTTTCCAGGCGTTGCGCGTTGAGGTGAACAACGAGCTTGATTCCCTG AAGAATGTGCTTCCTCAAATCACTGACGCCCTCAATGTTGGGGGACGTGCAGTGTTTATGAGCTACCAGTCTCATGAGGA CAAGCTGGTGAAGAAGTTCTTCACGGATCTGACCACCTCTAAGACCCCTCCGGGCTTGCCTGTTGATCTTCCTGGAACTG CACCACAGTTTAAGCAGGTTACTCGCGGTGCTGAAACGGCTTCGGAAGCTGAAATTGAAGAAAACCCACGTGCCGCACCT GTGAAGGTGCGCGCAATCGAAAGAATCGGCAACAACTCAGGAGACCTCTCATGA
Upstream 100 bases:
>100_bases TGATATGTGGCTATGACATTGTCGCGCAGTTTTTTTATCCACAAACATAAGTACAAGACATTGGACATCTAGGCCGGCAG GAAAAGGGGGGAACACGCAC
Downstream 100 bases:
>100_bases CCATGACAAATGGCTCCCGCACAGAGTCGGGAAAGATTCGCGATCGACGTGTCGCTGACGCTGATCCACGGTATGGCCGT CGCGTCTCGGTGAGTAGGGA
Product: S-adenosyl-methyltransferase MraW
Products: NA
Alternate protein names: 16S rRNA m(4)C1402 methyltransferase; rRNA (cytosine-N(4)-)-methyltransferase RsmH [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MEDFSLDGNHGHVPVMRDRMAALIAEHVEALGENAVIVDATLGAGGHAEFFLNTFPKARLIGLDRDQNALRDARARLAPF GERFIGVQTRFDGLREVLESVEGDIIDLAREHGIAGALFDLGVSSMQLDQVERGFAYRTDAPLDMRMDATQGITAADILN TYSHGDIARILKTYGDERFAGKIASAVLKEREKEPFTTSARLVELLYDAIPAATRRTGGHPAKRTFQALRVEVNNELDSL KNVLPQITDALNVGGRAVFMSYQSHEDKLVKKFFTDLTTSKTPPGLPVDLPGTAPQFKQVTRGAETASEAEIEENPRAAP VKVRAIERIGNNSGDLS
Sequences:
>Translated_337_residues MEDFSLDGNHGHVPVMRDRMAALIAEHVEALGENAVIVDATLGAGGHAEFFLNTFPKARLIGLDRDQNALRDARARLAPF GERFIGVQTRFDGLREVLESVEGDIIDLAREHGIAGALFDLGVSSMQLDQVERGFAYRTDAPLDMRMDATQGITAADILN TYSHGDIARILKTYGDERFAGKIASAVLKEREKEPFTTSARLVELLYDAIPAATRRTGGHPAKRTFQALRVEVNNELDSL KNVLPQITDALNVGGRAVFMSYQSHEDKLVKKFFTDLTTSKTPPGLPVDLPGTAPQFKQVTRGAETASEAEIEENPRAAP VKVRAIERIGNNSGDLS >Mature_337_residues MEDFSLDGNHGHVPVMRDRMAALIAEHVEALGENAVIVDATLGAGGHAEFFLNTFPKARLIGLDRDQNALRDARARLAPF GERFIGVQTRFDGLREVLESVEGDIIDLAREHGIAGALFDLGVSSMQLDQVERGFAYRTDAPLDMRMDATQGITAADILN TYSHGDIARILKTYGDERFAGKIASAVLKEREKEPFTTSARLVELLYDAIPAATRRTGGHPAKRTFQALRVEVNNELDSL KNVLPQITDALNVGGRAVFMSYQSHEDKLVKKFFTDLTTSKTPPGLPVDLPGTAPQFKQVTRGAETASEAEIEENPRAAP VKVRAIERIGNNSGDLS
Specific function: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA [H]
COG id: COG0275
COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RsmH family [H]
Homologues:
Organism=Homo sapiens, GI165377209, Length=282, Percent_Identity=35.8156028368794, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI165377202, Length=200, Percent_Identity=35, Blast_Score=106, Evalue=4e-23, Organism=Escherichia coli, GI1786270, Length=329, Percent_Identity=37.6899696048632, Blast_Score=189, Evalue=3e-49, Organism=Drosophila melanogaster, GI62472493, Length=341, Percent_Identity=33.1378299120235, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI28571637, Length=341, Percent_Identity=33.1378299120235, Blast_Score=155, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002903 [H]
Pfam domain/function: PF01795 Methyltransf_5 [H]
EC number: NA
Molecular weight: Translated: 36809; Mature: 36809
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDFSLDGNHGHVPVMRDRMAALIAEHVEALGENAVIVDATLGAGGHAEFFLNTFPKARL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCEE IGLDRDQNALRDARARLAPFGERFIGVQTRFDGLREVLESVEGDIIDLAREHGIAGALFD EECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH LGVSSMQLDQVERGFAYRTDAPLDMRMDATQGITAADILNTYSHGDIARILKTYGDERFA HCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHH GKIASAVLKEREKEPFTTSARLVELLYDAIPAATRRTGGHPAKRTFQALRVEVNNELDSL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KNVLPQITDALNVGGRAVFMSYQSHEDKLVKKFFTDLTTSKTPPGLPVDLPGTAPQFKQV HHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHH TRGAETASEAEIEENPRAAPVKVRAIERIGNNSGDLS HHCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MEDFSLDGNHGHVPVMRDRMAALIAEHVEALGENAVIVDATLGAGGHAEFFLNTFPKARL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCEE IGLDRDQNALRDARARLAPFGERFIGVQTRFDGLREVLESVEGDIIDLAREHGIAGALFD EECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH LGVSSMQLDQVERGFAYRTDAPLDMRMDATQGITAADILNTYSHGDIARILKTYGDERFA HCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHH GKIASAVLKEREKEPFTTSARLVELLYDAIPAATRRTGGHPAKRTFQALRVEVNNELDSL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KNVLPQITDALNVGGRAVFMSYQSHEDKLVKKFFTDLTTSKTPPGLPVDLPGTAPQFKQV HHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHH TRGAETASEAEIEENPRAAPVKVRAIERIGNNSGDLS HHCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA