| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
Click here to switch to the map view.
The map label for this gene is hslR [C]
Identifier: 62390959
GI number: 62390959
Start: 2211767
End: 2212147
Strand: Reverse
Name: hslR [C]
Synonym: cg2330
Alternate gene names: 62390959
Gene position: 2212147-2211767 (Counterclockwise)
Preceding gene: 62390960
Following gene: 62390957
Centisome position: 67.39
GC content: 59.58
Gene sequence:
>381_bases ATGTCAGACACTGATGGATTACCTGTCCGCATCGACGCGTGGGTGTGGGCAGTTCGTTTATATAAAACCCGGTCAGAGGC TGCCGAAGCCTGCAGGGCAGGGCACGTCAAGCTAAACAACAACGCGGTCAAACCTGCCCAACAAGTGGTGCCAGGTGACC GCGTGCGCGTGTGGGTAAACCACCGCGAGTTTGATGTGGAGGTGCTGCGCACCATCAAGAAGCGAGTCGGAGCCTCGGTG GCCCGAACCTGCTACGTTGACCACACCCCGCCACCACCACCGATGGAAGTGCTGGCGTCGATTCCTCGCCGTGACCGTGG AGCCGGACGGCCCACCAAGAAGGAACGGCGAGAAATGGAACAGTTCAGGGGAATGTCCTAA
Upstream 100 bases:
>100_bases ATGGGACTTGGATTGATCATCGCCGTGGTCGGCGGTTTTTATTACTACAACAAGGTCCAAAAGATCATTAACGAAAAAGA CCGTTACTAGTTAGAAATCT
Downstream 100 bases:
>100_bases GACCTTCTTAAGCCTGCTTGGTCAAGATGTCCTTCACCAGCGGAATAACCTCAGTGCCATACAACTCAATGGACTTCAGC AAGTACTCATGAGGGGTCTG
Product: ribosome-associated heat shock protein implicated in the recycling of the 50S subunit S4-like protein
Products: NA
Alternate protein names: Ribosome-Associated Heat Shock Protein; Heat Shock Protein Hsp; S4 Domain-Containing Protein; Ribosome-Associated Heat Shock Protein Hsp; S4 Domain Protein; Ribosome-Associated Heat Shock S Subunit; Hsp15 Family Heat Shock Protein; HEAT Shock-Like Protein; Ribosome-Associated Heat Shock Protein HSP
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSDTDGLPVRIDAWVWAVRLYKTRSEAAEACRAGHVKLNNNAVKPAQQVVPGDRVRVWVNHREFDVEVLRTIKKRVGASV ARTCYVDHTPPPPPMEVLASIPRRDRGAGRPTKKERREMEQFRGMS
Sequences:
>Translated_126_residues MSDTDGLPVRIDAWVWAVRLYKTRSEAAEACRAGHVKLNNNAVKPAQQVVPGDRVRVWVNHREFDVEVLRTIKKRVGASV ARTCYVDHTPPPPPMEVLASIPRRDRGAGRPTKKERREMEQFRGMS >Mature_125_residues SDTDGLPVRIDAWVWAVRLYKTRSEAAEACRAGHVKLNNNAVKPAQQVVPGDRVRVWVNHREFDVEVLRTIKKRVGASVA RTCYVDHTPPPPPMEVLASIPRRDRGAGRPTKKERREMEQFRGMS
Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]
COG id: COG1188
COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14329; Mature: 14197
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTDGLPVRIDAWVWAVRLYKTRSEAAEACRAGHVKLNNNAVKPAQQVVPGDRVRVWVN CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHCCCCCEEEEEEC HREFDVEVLRTIKKRVGASVARTCYVDHTPPPPPMEVLASIPRRDRGAGRPTKKERREME CCCCCHHHHHHHHHHHCHHHHHHEECCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH QFRGMS HHCCCC >Mature Secondary Structure SDTDGLPVRIDAWVWAVRLYKTRSEAAEACRAGHVKLNNNAVKPAQQVVPGDRVRVWVN CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHCCCCCEEEEEEC HREFDVEVLRTIKKRVGASVARTCYVDHTPPPPPMEVLASIPRRDRGAGRPTKKERREME CCCCCHHHHHHHHHHHCHHHHHHEECCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH QFRGMS HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA