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The map label for this gene is ytfH [H]

Identifier: 62390950

GI number: 62390950

Start: 2202045

End: 2202488

Strand: Reverse

Name: ytfH [H]

Synonym: cg2320

Alternate gene names: 62390950

Gene position: 2202488-2202045 (Counterclockwise)

Preceding gene: 62390956

Following gene: 62390949

Centisome position: 67.09

GC content: 52.7

Gene sequence:

>444_bases
ATGAACGTACAGTTTGAATCAGACATGGCCGTCCAACCAGGAAACACCATGGAAGCTACCGTCACCGACATTCGTGATGC
CAAGCGTAAAACAACCCAGCTTGATTCAGTAACGCCGTTTAAGAAGAATTGCCCGAGCCGCACCTTGCTCGACACCATCA
GTGACAAGTGGGCGGTGCTGATCCTGCTCAGCATGGAAAATGGTCCACAGCGCAATGGTGAAATCAAAGATCAGGTCCAA
GGAATTACCCCAAAGATGCTCACCCAGCGTCTTGGAGTGTTGGTGGAAGACGGACTGGTCACTCGCACCTCCCACGCAGT
TGTGCCGCCTCGTGTGGATTATCAGCTCACCGATCTGGGTGCTTCTGTCATTGAGCCTTGCCGTGCGATGTATTCCTGGG
CAGTGGAGAACATTAAGCAAGTGGAGGCCTACCGCTCAGCATAA

Upstream 100 bases:

>100_bases
AAACCAAAAATCACGACGCATTAAGTAACAGAGACTTAAATTAAGAACTCCGAACAACAACTTCGGATTGTTTCATTTTT
GAGGATGAAAGAGCTTTTCA

Downstream 100 bases:

>100_bases
GAACACTTGGCAAACCTCACGGTTTCCACCAGTTAAGATGTTGTGAGACAAATCCAAACATAGAAGGGCTGTGCATTCTC
ATGGTTTCAACCACAACATC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNVQFESDMAVQPGNTMEATVTDIRDAKRKTTQLDSVTPFKKNCPSRTLLDTISDKWAVLILLSMENGPQRNGEIKDQVQ
GITPKMLTQRLGVLVEDGLVTRTSHAVVPPRVDYQLTDLGASVIEPCRAMYSWAVENIKQVEAYRSA

Sequences:

>Translated_147_residues
MNVQFESDMAVQPGNTMEATVTDIRDAKRKTTQLDSVTPFKKNCPSRTLLDTISDKWAVLILLSMENGPQRNGEIKDQVQ
GITPKMLTQRLGVLVEDGLVTRTSHAVVPPRVDYQLTDLGASVIEPCRAMYSWAVENIKQVEAYRSA
>Mature_147_residues
MNVQFESDMAVQPGNTMEATVTDIRDAKRKTTQLDSVTPFKKNCPSRTLLDTISDKWAVLILLSMENGPQRNGEIKDQVQ
GITPKMLTQRLGVLVEDGLVTRTSHAVVPPRVDYQLTDLGASVIEPCRAMYSWAVENIKQVEAYRSA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=115, Percent_Identity=37.3913043478261, Blast_Score=93, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16380; Mature: 16380

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQFESDMAVQPGNTMEATVTDIRDAKRKTTQLDSVTPFKKNCPSRTLLDTISDKWAVL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCEEEE
ILLSMENGPQRNGEIKDQVQGITPKMLTQRLGVLVEDGLVTRTSHAVVPPRVDYQLTDLG
EEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEHHHCC
ASVIEPCRAMYSWAVENIKQVEAYRSA
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVQFESDMAVQPGNTMEATVTDIRDAKRKTTQLDSVTPFKKNCPSRTLLDTISDKWAVL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCEEEE
ILLSMENGPQRNGEIKDQVQGITPKMLTQRLGVLVEDGLVTRTSHAVVPPRVDYQLTDLG
EEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEHHHCC
ASVIEPCRAMYSWAVENIKQVEAYRSA
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]