| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is hisD
Identifier: 62390937
GI number: 62390937
Start: 2187628
End: 2188956
Strand: Reverse
Name: hisD
Synonym: cg2305
Alternate gene names: 62390937
Gene position: 2188956-2187628 (Counterclockwise)
Preceding gene: 62390939
Following gene: 62390936
Centisome position: 66.68
GC content: 57.11
Gene sequence:
>1329_bases ATGTTGAATGTCACTGACCTGCGAGGTCAAACACCATCCAAGAGCGACATCCGACGTGCTTTGCCACGTGGTGGCACTGA CGTGTGGTCTGTGCTTCCCATAGTGCAGCCTGTTGTAGAAGATGTCCAAAACCGCGGCGCTGAAGCTGCTTTGGATTACG GCGAGAAGTTCGACCATATTCGCCCCGCCTCGGTGCGGGTGCCAGCTGAGGTTATTGCTGCAGCAGAAAACACCTTAGAT CCGTTGGTGCGTGAATCGATTGAAGAGTCGATTCGTCGCGTCCGCAAGGTTCACGCTGAGCAAAAGCCATCCGAGCACAC CACTGAACTTTCACCAGGTGGCACCGTCACTGAGCGTTTCATGCCGATTGATCGCGTGGGACTGTACGTTCCAGGCGGCA ATGCGGTGTACCCATCAAGCGTGATTATGAATACTGTCCCAGCTCAAGAGGCTGGTGTGAACTCCCTTGTGGTTGCGTCG CCTCCTCAGGCTGAGCACGGTGGCTGGCCTCACCCCACCATTTTGGCGGCGTGTTCCATCTTGGGTGTTGATGAGGTGTG GGCTGTCGGCGGCGGTCAGGCCGTGGCGTTGCTGGCTTATGGTGATGACGCTGCAGGTCTCGAGCCTGTGGATATGATCA CTGGACCTGGCAATATCTTTGTCACCGCTGCGAAGCGCCTGGTCAGGGGAGTGGTAGGTACTGATTCTGAGGCTGGCCCT ACAGAAATCGCTGTGCTTGCTGATGCCTCTGCCAACGCCGTCAACGTTGCCTACGATCTGATCAGCCAAGCAGAACACGA TGTCATGGCTGCGTCCGTGCTCATCACTGACTCCGAGCAGCTTGCCAAGGACGTAAACAGGGAAATCGAGGCGCGTTACT CAATCACGCGCAACGCCGAGCGCGTCGCAGAAGCTTTGCGCGGGGCCCAGAGTGGCATCGTGCTTGTCGACGACATTTCC GTGGGTATCCAAGTAGCCGATCAATACGCAGCGGAACACCTGGAAATCCACACTGAGAACGCGCGCGCCGTAGCAGAGCA GATCACCAACGCGGGTGCGATCTTCGTGGGCGATTTCTCACCAGTACCACTGGGTGATTACTCCGCAGGATCCAACCACG TGCTGCCAACCTCTGGATCCGCTCGTTTCTCCGCAGGTCTATCCACGCACACGTTCCTTCGCCCAGTCAACCTCATTGAA TACGATGAGGCTGCTCTGAAGGACGTCTCGCAGGTTGTCATCAACTTTGCCAACGCCGAAGATCTTCCAGCGCACGGCGA AGCAATCCGTGCACGCTTTGAAAACCTCCCCACCACCGACGAGGCCTAA
Upstream 100 bases:
>100_bases GGTAAACATGCGGGCTTAAGAACTTGTGTTGAGGCCGCTTGGATTCGGGCACCGAGCTCGAAGAATTTCGATTCAACCTT TTAAGGGAGAACTTTTCGCC
Downstream 100 bases:
>100_bases GAAAAATGACCAAAATTACTTTGAGCGATTTGCCATTGCGTGAAGAACTGCGCGGTGAGCACGCTTACGGCGCACCCCAG CTCAACGTTGATATTCGCCT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MLNVTDLRGQTPSKSDIRRALPRGGTDVWSVLPIVQPVVEDVQNRGAEAALDYGEKFDHIRPASVRVPAEVIAAAENTLD PLVRESIEESIRRVRKVHAEQKPSEHTTELSPGGTVTERFMPIDRVGLYVPGGNAVYPSSVIMNTVPAQEAGVNSLVVAS PPQAEHGGWPHPTILAACSILGVDEVWAVGGGQAVALLAYGDDAAGLEPVDMITGPGNIFVTAAKRLVRGVVGTDSEAGP TEIAVLADASANAVNVAYDLISQAEHDVMAASVLITDSEQLAKDVNREIEARYSITRNAERVAEALRGAQSGIVLVDDIS VGIQVADQYAAEHLEIHTENARAVAEQITNAGAIFVGDFSPVPLGDYSAGSNHVLPTSGSARFSAGLSTHTFLRPVNLIE YDEAALKDVSQVVINFANAEDLPAHGEAIRARFENLPTTDEA
Sequences:
>Translated_442_residues MLNVTDLRGQTPSKSDIRRALPRGGTDVWSVLPIVQPVVEDVQNRGAEAALDYGEKFDHIRPASVRVPAEVIAAAENTLD PLVRESIEESIRRVRKVHAEQKPSEHTTELSPGGTVTERFMPIDRVGLYVPGGNAVYPSSVIMNTVPAQEAGVNSLVVAS PPQAEHGGWPHPTILAACSILGVDEVWAVGGGQAVALLAYGDDAAGLEPVDMITGPGNIFVTAAKRLVRGVVGTDSEAGP TEIAVLADASANAVNVAYDLISQAEHDVMAASVLITDSEQLAKDVNREIEARYSITRNAERVAEALRGAQSGIVLVDDIS VGIQVADQYAAEHLEIHTENARAVAEQITNAGAIFVGDFSPVPLGDYSAGSNHVLPTSGSARFSAGLSTHTFLRPVNLIE YDEAALKDVSQVVINFANAEDLPAHGEAIRARFENLPTTDEA >Mature_442_residues MLNVTDLRGQTPSKSDIRRALPRGGTDVWSVLPIVQPVVEDVQNRGAEAALDYGEKFDHIRPASVRVPAEVIAAAENTLD PLVRESIEESIRRVRKVHAEQKPSEHTTELSPGGTVTERFMPIDRVGLYVPGGNAVYPSSVIMNTVPAQEAGVNSLVVAS PPQAEHGGWPHPTILAACSILGVDEVWAVGGGQAVALLAYGDDAAGLEPVDMITGPGNIFVTAAKRLVRGVVGTDSEAGP TEIAVLADASANAVNVAYDLISQAEHDVMAASVLITDSEQLAKDVNREIEARYSITRNAERVAEALRGAQSGIVLVDDIS VGIQVADQYAAEHLEIHTENARAVAEQITNAGAIFVGDFSPVPLGDYSAGSNHVLPTSGSARFSAGLSTHTFLRPVNLIE YDEAALKDVSQVVINFANAEDLPAHGEAIRARFENLPTTDEA
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=410, Percent_Identity=35.3658536585366, Blast_Score=237, Evalue=9e-64, Organism=Saccharomyces cerevisiae, GI6319819, Length=430, Percent_Identity=34.8837209302326, Blast_Score=244, Evalue=1e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_CORGL (Q8NNT5)
Other databases:
- EMBL: AF160480 - EMBL: BA000036 - EMBL: BX927154 - RefSeq: NP_601301.1 - RefSeq: YP_226339.1 - ProteinModelPortal: Q8NNT5 - SMR: Q8NNT5 - GeneID: 1020053 - GeneID: 3343227 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg2305 - KEGG: cgl:NCgl2021 - HOGENOM: HBG329596 - OMA: LDAHKNA - PhylomeDB: Q8NNT5 - ProtClustDB: PRK00877 - BioCyc: CGLU196627:CG2305-MONOMER - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 46772; Mature: 46772
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 332-332 ACT_SITE 333-333 BINDING 129-129 BINDING 193-193 BINDING 218-218 BINDING 241-241 BINDING 263-263 BINDING 266-266 BINDING 333-333 BINDING 366-366 BINDING 420-420 BINDING 425-425
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNVTDLRGQTPSKSDIRRALPRGGTDVWSVLPIVQPVVEDVQNRGAEAALDYGEKFDHI CCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC RPASVRVPAEVIAAAENTLDPLVRESIEESIRRVRKVHAEQKPSEHTTELSPGGTVTERF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHC MPIDRVGLYVPGGNAVYPSSVIMNTVPAQEAGVNSLVVASPPQAEHGGWPHPTILAACSI CCHHHEEEEECCCCCCCCCHHHHCCCCCHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHH LGVDEVWAVGGGQAVALLAYGDDAAGLEPVDMITGPGNIFVTAAKRLVRGVVGTDSEAGP CCCHHHHCCCCCCEEEEEEECCCCCCCCCHHEEECCCCEEHHHHHHHHHHHCCCCCCCCC TEIAVLADASANAVNVAYDLISQAEHDVMAASVLITDSEQLAKDVNREIEARYSITRNAE CEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCHH RVAEALRGAQSGIVLVDDISVGIQVADQYAAEHLEIHTENARAVAEQITNAGAIFVGDFS HHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEEECCHHHHHHHHHCCCCEEEEECCC PVPLGDYSAGSNHVLPTSGSARFSAGLSTHTFLRPVNLIEYDEAALKDVSQVVINFANAE CCCCCCCCCCCCCEECCCCCCCEECCCCHHHHHCCCCCEECCHHHHHHHHHHHHHHCCCC DLPAHGEAIRARFENLPTTDEA CCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLNVTDLRGQTPSKSDIRRALPRGGTDVWSVLPIVQPVVEDVQNRGAEAALDYGEKFDHI CCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC RPASVRVPAEVIAAAENTLDPLVRESIEESIRRVRKVHAEQKPSEHTTELSPGGTVTERF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHC MPIDRVGLYVPGGNAVYPSSVIMNTVPAQEAGVNSLVVASPPQAEHGGWPHPTILAACSI CCHHHEEEEECCCCCCCCCHHHHCCCCCHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHH LGVDEVWAVGGGQAVALLAYGDDAAGLEPVDMITGPGNIFVTAAKRLVRGVVGTDSEAGP CCCHHHHCCCCCCEEEEEEECCCCCCCCCHHEEECCCCEEHHHHHHHHHHHCCCCCCCCC TEIAVLADASANAVNVAYDLISQAEHDVMAASVLITDSEQLAKDVNREIEARYSITRNAE CEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCHH RVAEALRGAQSGIVLVDDISVGIQVADQYAAEHLEIHTENARAVAEQITNAGAIFVGDFS HHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEEECCHHHHHHHHHCCCCEEEEECCC PVPLGDYSAGSNHVLPTSGSARFSAGLSTHTFLRPVNLIEYDEAALKDVSQVVINFANAE CCCCCCCCCCCCCEECCCCCCCEECCCCHHHHHCCCCCEECCHHHHHHHHHHHHHHCCCC DLPAHGEAIRARFENLPTTDEA CCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626