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The map label for this gene is dppE [H]

Identifier: 62390830

GI number: 62390830

Start: 2070290

End: 2071894

Strand: Direct

Name: dppE [H]

Synonym: cg2181

Alternate gene names: 62390830

Gene position: 2070290-2071894 (Clockwise)

Preceding gene: 62390829

Following gene: 62390831

Centisome position: 63.07

GC content: 58.63

Gene sequence:

>1605_bases
ATGACTTTGAAGAAGTCTCTCGCTGTAACCACGGCGGCTGCACTTGCTTTGAGCCTTGCCGCTTGCTCGTCCGACTCCTC
GTCCGACAGCTCCTCATCCTCATCAGGCAGCGAAGGCGGCGACAACTACGTCCTCGTCAACGGCACTGAGCCACAGAACC
CGCTCGTCCCAGGCAACACCAACGAAGTAGGTGGCGGTCGCATCGTCGACAGCATCTTCTCCGGCCTGGTCTACTACGAC
GTCGACGGCTCCCCTGTCAACGATGTTGCAGAGTCCATCGAACTCGAAGGTGACAAGACCTACCGCATCACCATCAAAGA
CGGCCAGACCTTCACCGATGGCACCCCAGTTACCGCTGAGAGCTTTGTCAACGCATGGAACTACAACGTAGCTAACAGCA
CGCTGTCCTCCTACTTCTTTGAGTCCATCCTCGGCTACGAAGAAGGCGTCGAGTCCATGGAAGGCCTCCAGGTCGTCGAC
GACACCACCTTCACCGTCGAGCTCACCCAGCCTGAGTCCGACTTCCCACTGCGCCTGGGATACTCCGCATTCTTCCCGCT
TCCTGAATCCGCATTTGACGACATGGACGCATTCGGTGAGAACCCAATCGGCAACGGTCCATACAAGCTCCAAGAGTGGA
ACCACAACCAGGACGCCACCATCGTTCCTAACGCGGACTACACCGGTGGACGCCAGGCTCAGAACGACGGCGTGAAGTTC
ATCTTCTACCCAACCTTCGACTCCGCTTACGCGGACCTGCTCTCCGACAACTTGGATGTGCTGGACGCTATCCCAGACTC
CGCGTTCTCCTCCTTCGAGGACGAGCTCTCTGGCCGTTCCATCAACCAGCCTTCCGCTGTGTTCCAGTCCTTCACCATCC
CGGAGAGCCTTGAGCACTTCTCCGGCGAAGAAGGCGTGCTGCGTCGCCAGGCCATCTCCTTGGCCGTCAACCGCGACGAG
ATCACCCAAACCATCTTCGAAGGCACCCGCACCCCAGCGACGGACTTCACCTCCCCTGTCATCGACGGACACTCTGATTC
CCTCCAGGGCGCAGATGTCTTGACCTACGATCCAGAGCGCGCTCAGGAACTGTGGGCACAGGCAGACGAGATCAGCCCTT
GGTCCGGCGAGTTCTCCATCTCCTACAACGCAGACGGTGGACACCAGGCATGGGTGGACGCAACCGCCAATTCCATCCGC
AACACCCTGGGTATCGACGCCATCGGCAACCCATACCCAGACTTCAAGTCCCTGCGTGACGATGTCACCAACCGCACCAT
CAACGGCGCATTCCGCACCGGCTGGCAGGCAGACTACCCGTCCTTGGGCAACTTCCTCGGACCTTTGTACGGCACCGGTG
CAGGCTCCAACGATGGTGACTACTCCAACCCAGATTTCGATGCCAAGCTCGCCGAAGCAGCAAACGCGGCCGATGTTGAC
GCATCAACCCCGCTATACAACGAAGCACAGGAAATCCTGCTCCAGGATCTCCCAGCGATCCCAACTTGGTACTCCAACGC
AGTTGGTGGATACTCCACCAACGTGGACAACGTGGAATTCCAGTGGAACTCGCAACCTGCGTACTACCAGATCACCAAGA
ACTAG

Upstream 100 bases:

>100_bases
TTCAAGTTTGGCTGTGACTCATGTCGCACATAGTATTTCAATCACCGGATCCGCACGATTGCAAAATCCTGGGGAATATT
CATAACAACGGAGGTCACTC

Downstream 100 bases:

>100_bases
TAGCTTCGCACCACCCGCTCATCTTGTGTGAGCTCTAGAAGAAAGGCCCAGGTTAATGTTCACCCCGACCTGGGCCTTTC
ACCTTGAACACTTAAAACAT

Product: ABC-type peptide transport system, component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MTLKKSLAVTTAAALALSLAACSSDSSSDSSSSSSGSEGGDNYVLVNGTEPQNPLVPGNTNEVGGGRIVDSIFSGLVYYD
VDGSPVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAESFVNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVD
DTTFTVELTQPESDFPLRLGYSAFFPLPESAFDDMDAFGENPIGNGPYKLQEWNHNQDATIVPNADYTGGRQAQNDGVKF
IFYPTFDSAYADLLSDNLDVLDAIPDSAFSSFEDELSGRSINQPSAVFQSFTIPESLEHFSGEEGVLRRQAISLAVNRDE
ITQTIFEGTRTPATDFTSPVIDGHSDSLQGADVLTYDPERAQELWAQADEISPWSGEFSISYNADGGHQAWVDATANSIR
NTLGIDAIGNPYPDFKSLRDDVTNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVD
ASTPLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN

Sequences:

>Translated_534_residues
MTLKKSLAVTTAAALALSLAACSSDSSSDSSSSSSGSEGGDNYVLVNGTEPQNPLVPGNTNEVGGGRIVDSIFSGLVYYD
VDGSPVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAESFVNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVD
DTTFTVELTQPESDFPLRLGYSAFFPLPESAFDDMDAFGENPIGNGPYKLQEWNHNQDATIVPNADYTGGRQAQNDGVKF
IFYPTFDSAYADLLSDNLDVLDAIPDSAFSSFEDELSGRSINQPSAVFQSFTIPESLEHFSGEEGVLRRQAISLAVNRDE
ITQTIFEGTRTPATDFTSPVIDGHSDSLQGADVLTYDPERAQELWAQADEISPWSGEFSISYNADGGHQAWVDATANSIR
NTLGIDAIGNPYPDFKSLRDDVTNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVD
ASTPLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN
>Mature_533_residues
TLKKSLAVTTAAALALSLAACSSDSSSDSSSSSSGSEGGDNYVLVNGTEPQNPLVPGNTNEVGGGRIVDSIFSGLVYYDV
DGSPVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAESFVNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVDD
TTFTVELTQPESDFPLRLGYSAFFPLPESAFDDMDAFGENPIGNGPYKLQEWNHNQDATIVPNADYTGGRQAQNDGVKFI
FYPTFDSAYADLLSDNLDVLDAIPDSAFSSFEDELSGRSINQPSAVFQSFTIPESLEHFSGEEGVLRRQAISLAVNRDEI
TQTIFEGTRTPATDFTSPVIDGHSDSLQGADVLTYDPERAQELWAQADEISPWSGEFSISYNADGGHQAWVDATANSIRN
TLGIDAIGNPYPDFKSLRDDVTNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVDA
STPLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=540, Percent_Identity=25.5555555555556, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787495, Length=523, Percent_Identity=25.6214149139579, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789397, Length=477, Percent_Identity=28.5115303983228, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1789966, Length=528, Percent_Identity=23.2954545454545, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787052, Length=471, Percent_Identity=24.6284501061571, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787762, Length=480, Percent_Identity=25, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57689; Mature: 57557

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKKSLAVTTAAALALSLAACSSDSSSDSSSSSSGSEGGDNYVLVNGTEPQNPLVPGNT
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
NEVGGGRIVDSIFSGLVYYDVDGSPVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAE
CCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCHH
SFVNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVDDTTFTVELTQPESDFPLRLG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCEEEC
YSAFFPLPESAFDDMDAFGENPIGNGPYKLQEWNHNQDATIVPNADYTGGRQAQNDGVKF
CCEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEE
IFYPTFDSAYADLLSDNLDVLDAIPDSAFSSFEDELSGRSINQPSAVFQSFTIPESLEHF
EEEECCCHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHC
SGEEGVLRRQAISLAVNRDEITQTIFEGTRTPATDFTSPVIDGHSDSLQGADVLTYDPER
CCCCHHHHHHHHHHEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHH
AQELWAQADEISPWSGEFSISYNADGGHQAWVDATANSIRNTLGIDAIGNPYPDFKSLRD
HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
DVTNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVD
HHHCCEECCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
ASTPLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN
CCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCEEEEECC
>Mature Secondary Structure 
TLKKSLAVTTAAALALSLAACSSDSSSDSSSSSSGSEGGDNYVLVNGTEPQNPLVPGNT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
NEVGGGRIVDSIFSGLVYYDVDGSPVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAE
CCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCHH
SFVNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVDDTTFTVELTQPESDFPLRLG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCEEEC
YSAFFPLPESAFDDMDAFGENPIGNGPYKLQEWNHNQDATIVPNADYTGGRQAQNDGVKF
CCEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEE
IFYPTFDSAYADLLSDNLDVLDAIPDSAFSSFEDELSGRSINQPSAVFQSFTIPESLEHF
EEEECCCHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHC
SGEEGVLRRQAISLAVNRDEITQTIFEGTRTPATDFTSPVIDGHSDSLQGADVLTYDPER
CCCCHHHHHHHHHHEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHH
AQELWAQADEISPWSGEFSISYNADGGHQAWVDATANSIRNTLGIDAIGNPYPDFKSLRD
HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
DVTNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVD
HHHCCEECCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
ASTPLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN
CCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]