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The map label for this gene is recJ [H]

Identifier: 62390618

GI number: 62390618

Start: 1833657

End: 1835519

Strand: Direct

Name: recJ [H]

Synonym: cg1956

Alternate gene names: 62390618

Gene position: 1833657-1835519 (Clockwise)

Preceding gene: 62390617

Following gene: 62390620

Centisome position: 55.86

GC content: 51.37

Gene sequence:

>1863_bases
ATGACCGTTACCTCACCAGCAGCGCTCGCACTCAGCGACATGTCCTATGTGGACATCATTAAGAAGAAGCGCGGATGGAC
AACCGAGTTTTTCCACAGCACCATCAACACCGGTGAAACCACCACACCGCTACCAGACAGCGACCGTGCCACAGCACTAA
TCCATGACCACATCACCAAGGCTCAAGAGATAACCATCATCACCGACTTTGATATGGACGGTATTTCAGCCGGTGTCATT
GCCTATGCAGGTCTTGCCGAACTGGGCGCACAGGTCAATATGGTGGTGCCCGACTATCGTGGCGAACGAAATGTCACAGC
CAGCGATATTGATCGTGCGCTAGAGCTCTACCCTGCAACCTCACTCATCATCACCTGCGATGTCGGCATCGGCTCCCATG
AAGGTATTGCCCGTGCTCACGAACGCAGTATCGCCGTCCTGGTCACAGATCACCACATGGAGGTCGAACCCTGCCAGGCC
GATGTGGTTCTTAACCCCAACAGAATTGACTCTGACTACCCCAACAAAGATATTTGCGGTGCGCAGGTCATTTTCGCCAC
ATTGAGTGACTATGCACGTCGTTATCGGGCGGACAAGATTATCGACATTAATTTGTTGGCTGTTTTCTCAGGCATTGGTG
CACTCGCCGATGTCATGCCTCTCACCCGTGACACTCGACCAACAGTGAAGCAGGCTATTGCGTTGCTTCGGCTTGCTATC
CCACAAGTAAGTAAAAACCGTTTCGGCGGTTGGGATACCTATGCTGCACGCTCTGTTAATCCTGATACGTCCACACTCAT
GCATATTGTCAATGCCAGCCAGCATGATCACCGCTTCATTGCAGCCTTCCAAGGCATCTCAATTCTTCTTGGTGAACTGA
TTGCGCAAAAGAAGCTAGTAAACATCGACAATATTTCTGAGTCATTCATTGGCTTCACTCTTGGTCCGATGTTTAACGCT
ACTCGTCGTGTTGGTGGCGACATGCACGATTCATTTCTCGTGTTTGCGCCCCATGCCGCACTAGCATCACAGCCGTCGAT
GAATCCAAATCGACATGCTGCGATCTCTCGCATCATTGATAACAACGAACGTCGCAAAGAGCTCTCCAAGTCCTCTTATG
CTGCCGTACACAGCTCAGATCAGCCCTACGCGCCCTTTGTGTGGCTCTCTGAGGCACCAAGCGGCATTCTTGGTCTCATT
GCCTCACAGCTCACTCGTGAGTCTGACGTGCCTGCCATTGTCATTAATCCAGATACCTTGTCCGGTTCAGCTCGCTCACC
TGAGTGGGCACCGATCATCACCCAAGTAAACACCCTCAGCGCACAAGGTCACGGCGGTATTCATGCTGCAGGCCATGAGT
ACGCCTGTGGTATGCGTTTTGATAACCATGATGACATTGTGACCTTTGTTGCAACACTCGACGCACTCGATAAAAACACG
CCACGGGAAGCACAGCCGGCAGATCTGCATTTGGTTGACATTGACCACGCGCGTCCTGTGCTTGATAACCCCTCACTCAC
CCAAGAGCTCAGTACGGTCGATGCTGCAGTGGATGCTGCACAGTTGCTTGTTCTCATTGATCAGCTTGATCAACTGCAGC
CATTTGGACATGGTTTTACCTATCCGCGCATCGACGTGACGTTCAGGCCGGCAGAAACAGAATTCAAGGTTATGGGTCAG
CACCATCAACATCTCAAGGTGATCACTCACTCAGGGTTGACCTTATTGTGGTGGAATAAGGCTCAGCAGCTCGATGAGAT
CGCACAGTCTGAATTAGTCACCATGTCTGTGGAGCTCGATGTCAATATGTTCCGTGGGTTTATTTCCCCGCAAGGCATTG
TCTCTGCGTGCACAGTTATCTAG

Upstream 100 bases:

>100_bases
ACCGGATACCTTATGAAACACCTGGTGAGCGGTGTGTTTCACCCCAACAACCGAGTAAAATATATCTAGTACTATTTTAC
GATTGAAAGTAGATTTTTCT

Downstream 100 bases:

>100_bases
CTTGGTTGCATAAGCACCAAAAACAACCCCCAACAGCCTCTACACAGGCAGTTGGGGGTTGTTGCTATGTTTGTGGTCGT
TAAGGTCTGAAAAAGTCTCT

Product: single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 620; Mature: 619

Protein sequence:

>620_residues
MTVTSPAALALSDMSYVDIIKKKRGWTTEFFHSTINTGETTTPLPDSDRATALIHDHITKAQEITIITDFDMDGISAGVI
AYAGLAELGAQVNMVVPDYRGERNVTASDIDRALELYPATSLIITCDVGIGSHEGIARAHERSIAVLVTDHHMEVEPCQA
DVVLNPNRIDSDYPNKDICGAQVIFATLSDYARRYRADKIIDINLLAVFSGIGALADVMPLTRDTRPTVKQAIALLRLAI
PQVSKNRFGGWDTYAARSVNPDTSTLMHIVNASQHDHRFIAAFQGISILLGELIAQKKLVNIDNISESFIGFTLGPMFNA
TRRVGGDMHDSFLVFAPHAALASQPSMNPNRHAAISRIIDNNERRKELSKSSYAAVHSSDQPYAPFVWLSEAPSGILGLI
ASQLTRESDVPAIVINPDTLSGSARSPEWAPIITQVNTLSAQGHGGIHAAGHEYACGMRFDNHDDIVTFVATLDALDKNT
PREAQPADLHLVDIDHARPVLDNPSLTQELSTVDAAVDAAQLLVLIDQLDQLQPFGHGFTYPRIDVTFRPAETEFKVMGQ
HHQHLKVITHSGLTLLWWNKAQQLDEIAQSELVTMSVELDVNMFRGFISPQGIVSACTVI

Sequences:

>Translated_620_residues
MTVTSPAALALSDMSYVDIIKKKRGWTTEFFHSTINTGETTTPLPDSDRATALIHDHITKAQEITIITDFDMDGISAGVI
AYAGLAELGAQVNMVVPDYRGERNVTASDIDRALELYPATSLIITCDVGIGSHEGIARAHERSIAVLVTDHHMEVEPCQA
DVVLNPNRIDSDYPNKDICGAQVIFATLSDYARRYRADKIIDINLLAVFSGIGALADVMPLTRDTRPTVKQAIALLRLAI
PQVSKNRFGGWDTYAARSVNPDTSTLMHIVNASQHDHRFIAAFQGISILLGELIAQKKLVNIDNISESFIGFTLGPMFNA
TRRVGGDMHDSFLVFAPHAALASQPSMNPNRHAAISRIIDNNERRKELSKSSYAAVHSSDQPYAPFVWLSEAPSGILGLI
ASQLTRESDVPAIVINPDTLSGSARSPEWAPIITQVNTLSAQGHGGIHAAGHEYACGMRFDNHDDIVTFVATLDALDKNT
PREAQPADLHLVDIDHARPVLDNPSLTQELSTVDAAVDAAQLLVLIDQLDQLQPFGHGFTYPRIDVTFRPAETEFKVMGQ
HHQHLKVITHSGLTLLWWNKAQQLDEIAQSELVTMSVELDVNMFRGFISPQGIVSACTVI
>Mature_619_residues
TVTSPAALALSDMSYVDIIKKKRGWTTEFFHSTINTGETTTPLPDSDRATALIHDHITKAQEITIITDFDMDGISAGVIA
YAGLAELGAQVNMVVPDYRGERNVTASDIDRALELYPATSLIITCDVGIGSHEGIARAHERSIAVLVTDHHMEVEPCQAD
VVLNPNRIDSDYPNKDICGAQVIFATLSDYARRYRADKIIDINLLAVFSGIGALADVMPLTRDTRPTVKQAIALLRLAIP
QVSKNRFGGWDTYAARSVNPDTSTLMHIVNASQHDHRFIAAFQGISILLGELIAQKKLVNIDNISESFIGFTLGPMFNAT
RRVGGDMHDSFLVFAPHAALASQPSMNPNRHAAISRIIDNNERRKELSKSSYAAVHSSDQPYAPFVWLSEAPSGILGLIA
SQLTRESDVPAIVINPDTLSGSARSPEWAPIITQVNTLSAQGHGGIHAAGHEYACGMRFDNHDDIVTFVATLDALDKNTP
REAQPADLHLVDIDHARPVLDNPSLTQELSTVDAAVDAAQLLVLIDQLDQLQPFGHGFTYPRIDVTFRPAETEFKVMGQH
HQHLKVITHSGLTLLWWNKAQQLDEIAQSELVTMSVELDVNMFRGFISPQGIVSACTVI

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=586, Percent_Identity=22.1843003412969, Blast_Score=96, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 67748; Mature: 67617

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTSPAALALSDMSYVDIIKKKRGWTTEFFHSTINTGETTTPLPDSDRATALIHDHITK
CCCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHCCC
AQEITIITDFDMDGISAGVIAYAGLAELGAQVNMVVPDYRGERNVTASDIDRALELYPAT
CEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCC
SLIITCDVGIGSHEGIARAHERSIAVLVTDHHMEVEPCQADVVLNPNRIDSDYPNKDICG
EEEEEEECCCCCCCCHHHHCCCEEEEEEECCCCEECCCCEEEEECCCCCCCCCCCCCCCH
AQVIFATLSDYARRYRADKIIDINLLAVFSGIGALADVMPLTRDTRPTVKQAIALLRLAI
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PQVSKNRFGGWDTYAARSVNPDTSTLMHIVNASQHDHRFIAAFQGISILLGELIAQKKLV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
NIDNISESFIGFTLGPMFNATRRVGGDMHDSFLVFAPHAALASQPSMNPNRHAAISRIID
CCCCCCHHHHHEEHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHC
NNERRKELSKSSYAAVHSSDQPYAPFVWLSEAPSGILGLIASQLTRESDVPAIVINPDTL
CCHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCC
SGSARSPEWAPIITQVNTLSAQGHGGIHAAGHEYACGMRFDNHDDIVTFVATLDALDKNT
CCCCCCCCCCHHEEEEEEECCCCCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHCCCC
PREAQPADLHLVDIDHARPVLDNPSLTQELSTVDAAVDAAQLLVLIDQLDQLQPFGHGFT
CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YPRIDVTFRPAETEFKVMGQHHQHLKVITHSGLTLLWWNKAQQLDEIAQSELVTMSVELD
CCEEEEEECCCCCHHHHHCCCCCEEEEEEECCEEEEEECHHHHHHHHHHHCEEEEEEEEC
VNMFRGFISPQGIVSACTVI
HHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure 
TVTSPAALALSDMSYVDIIKKKRGWTTEFFHSTINTGETTTPLPDSDRATALIHDHITK
CCCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHCCC
AQEITIITDFDMDGISAGVIAYAGLAELGAQVNMVVPDYRGERNVTASDIDRALELYPAT
CEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCC
SLIITCDVGIGSHEGIARAHERSIAVLVTDHHMEVEPCQADVVLNPNRIDSDYPNKDICG
EEEEEEECCCCCCCCHHHHCCCEEEEEEECCCCEECCCCEEEEECCCCCCCCCCCCCCCH
AQVIFATLSDYARRYRADKIIDINLLAVFSGIGALADVMPLTRDTRPTVKQAIALLRLAI
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PQVSKNRFGGWDTYAARSVNPDTSTLMHIVNASQHDHRFIAAFQGISILLGELIAQKKLV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
NIDNISESFIGFTLGPMFNATRRVGGDMHDSFLVFAPHAALASQPSMNPNRHAAISRIID
CCCCCCHHHHHEEHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHC
NNERRKELSKSSYAAVHSSDQPYAPFVWLSEAPSGILGLIASQLTRESDVPAIVINPDTL
CCHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCC
SGSARSPEWAPIITQVNTLSAQGHGGIHAAGHEYACGMRFDNHDDIVTFVATLDALDKNT
CCCCCCCCCCHHEEEEEEECCCCCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHCCCC
PREAQPADLHLVDIDHARPVLDNPSLTQELSTVDAAVDAAQLLVLIDQLDQLQPFGHGFT
CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YPRIDVTFRPAETEFKVMGQHHQHLKVITHSGLTLLWWNKAQQLDEIAQSELVTMSVELD
CCEEEEEECCCCCHHHHHCCCCCEEEEEEECCEEEEEECHHHHHHHHHHHCEEEEEEEEC
VNMFRGFISPQGIVSACTVI
HHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]