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The map label for this gene is tnp14b(ISCg14a) [H]

Identifier: 62390614

GI number: 62390614

Start: 1827220

End: 1828116

Strand: Reverse

Name: tnp14b(ISCg14a) [H]

Synonym: cg1950

Alternate gene names: 62390614

Gene position: 1828116-1827220 (Counterclockwise)

Preceding gene: 62390615

Following gene: 62390613

Centisome position: 55.69

GC content: 53.51

Gene sequence:

>897_bases
GTGATCCGCTTCCGATTCGTTGATGACGCTCGAAAGACCTACTCGGTTAAGCGGATATGTGACGTGTTGAAGCTCAATCG
TTCCTCATATTACAAATGGAAAAGCACCGCCTTCACGCGTGAAAAACGCCTGCTCAGCGACGCTATTCTTGGGGTCCAGG
TCAAGACTGTATTCACCACTCACAGTGGCTGTTATGGGGCCAAACGAATCGCGGCTGAACTCAAAGACCAGATCGGCCAT
GACCTTGCGAACCACAAGCGGGTTGCCCGGATCATGCGATCGTTGAAGCTGTTCGGATACACAAAGAAACGCAAGGTCAC
CACCACCGTGCCGGACAAAACCAAGACAGTGTTCCCTGACCTTGTCGGCCGGAAGTTCACCGCTGACAAGCCGAACCAGC
TCTATGTCGGGGATATCACCTATCTGCCAATTCAGGATGGGTCGAATATGTACCTGGCCACGGTCATTGACTGTTACTCC
CGCAGGTTGGTGGGCTTTTCTATCGCAGATCACATGCGCACGAGCTTGGTCCAGGACGCGCTGCTCATGGCTAAAGACCA
GCGTGGAAACCTCAAAGGTGCGATTTTTCACTCCGACCACGGCAGCGTTTACACGTCTCATGCGTTTCAGGAGACGTGTA
AGAAACTAGGGATCAGGCAGTCGATGGGATCAATTGGCACCAGTGCTGACAACGCTTTGGCGGAGTCTTTCAATGCCGCG
ATGAAGCGGGAAGTCCTGCAGGATTCCAAGACCTTTGAAAATCAATTGTGCTGTCGCCGGGACGTCTTCCGCTGGTGTAC
CCGTTACAACACGGTTCGCCGGCATTCCTGGTGTAGATATCTGGCTCCGGTCGTGTTTGAGGAGCGCGGTCCTGCTATCC
TGAGATCTGCTTCCTGA

Upstream 100 bases:

>100_bases
CTGAACGGATCCGCCAACTTGAAAAGGAAAATGCACTCCTCCGCGAAGAGCGTGACATCCTGCGGAAAGCGGCCAAATAT
TTCGCGGAAGAGACGAACTG

Downstream 100 bases:

>100_bases
TCAAATCCTCCGTGTCCACCATCCGGGGGTCGGACCCGCTGAAGCAGGGGCGCGTATTGGGCTGCGATATCAATAAGGCG
ACTTATCTTCCCTGTACGAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MIRFRFVDDARKTYSVKRICDVLKLNRSSYYKWKSTAFTREKRLLSDAILGVQVKTVFTTHSGCYGAKRIAAELKDQIGH
DLANHKRVARIMRSLKLFGYTKKRKVTTTVPDKTKTVFPDLVGRKFTADKPNQLYVGDITYLPIQDGSNMYLATVIDCYS
RRLVGFSIADHMRTSLVQDALLMAKDQRGNLKGAIFHSDHGSVYTSHAFQETCKKLGIRQSMGSIGTSADNALAESFNAA
MKREVLQDSKTFENQLCCRRDVFRWCTRYNTVRRHSWCRYLAPVVFEERGPAILRSAS

Sequences:

>Translated_298_residues
MIRFRFVDDARKTYSVKRICDVLKLNRSSYYKWKSTAFTREKRLLSDAILGVQVKTVFTTHSGCYGAKRIAAELKDQIGH
DLANHKRVARIMRSLKLFGYTKKRKVTTTVPDKTKTVFPDLVGRKFTADKPNQLYVGDITYLPIQDGSNMYLATVIDCYS
RRLVGFSIADHMRTSLVQDALLMAKDQRGNLKGAIFHSDHGSVYTSHAFQETCKKLGIRQSMGSIGTSADNALAESFNAA
MKREVLQDSKTFENQLCCRRDVFRWCTRYNTVRRHSWCRYLAPVVFEERGPAILRSAS
>Mature_298_residues
MIRFRFVDDARKTYSVKRICDVLKLNRSSYYKWKSTAFTREKRLLSDAILGVQVKTVFTTHSGCYGAKRIAAELKDQIGH
DLANHKRVARIMRSLKLFGYTKKRKVTTTVPDKTKTVFPDLVGRKFTADKPNQLYVGDITYLPIQDGSNMYLATVIDCYS
RRLVGFSIADHMRTSLVQDALLMAKDQRGNLKGAIFHSDHGSVYTSHAFQETCKKLGIRQSMGSIGTSADNALAESFNAA
MKREVLQDSKTFENQLCCRRDVFRWCTRYNTVRRHSWCRYLAPVVFEERGPAILRSAS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=250, Percent_Identity=38, Blast_Score=144, Evalue=1e-34,
Organism=Escherichia coli, GI1788405, Length=296, Percent_Identity=33.445945945946, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1787263, Length=296, Percent_Identity=33.445945945946, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1786753, Length=296, Percent_Identity=33.445945945946, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1786570, Length=296, Percent_Identity=33.445945945946, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1786490, Length=296, Percent_Identity=33.445945945946, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1789981, Length=283, Percent_Identity=24.7349823321555, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34066; Mature: 34066

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFRFVDDARKTYSVKRICDVLKLNRSSYYKWKSTAFTREKRLLSDAILGVQVKTVFTT
CEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCEEEEEEEEE
HSGCYGAKRIAAELKDQIGHDLANHKRVARIMRSLKLFGYTKKRKVTTTVPDKTKTVFPD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
LVGRKFTADKPNQLYVGDITYLPIQDGSNMYLATVIDCYSRRLVGFSIADHMRTSLVQDA
HHCCCCCCCCCCEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMAKDQRGNLKGAIFHSDHGSVYTSHAFQETCKKLGIRQSMGSIGTSADNALAESFNAA
HHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHH
MKREVLQDSKTFENQLCCRRDVFRWCTRYNTVRRHSWCRYLAPVVFEERGPAILRSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
>Mature Secondary Structure
MIRFRFVDDARKTYSVKRICDVLKLNRSSYYKWKSTAFTREKRLLSDAILGVQVKTVFTT
CEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCEEEEEEEEE
HSGCYGAKRIAAELKDQIGHDLANHKRVARIMRSLKLFGYTKKRKVTTTVPDKTKTVFPD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
LVGRKFTADKPNQLYVGDITYLPIQDGSNMYLATVIDCYSRRLVGFSIADHMRTSLVQDA
HHCCCCCCCCCCEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMAKDQRGNLKGAIFHSDHGSVYTSHAFQETCKKLGIRQSMGSIGTSADNALAESFNAA
HHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHH
MKREVLQDSKTFENQLCCRRDVFRWCTRYNTVRRHSWCRYLAPVVFEERGPAILRSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]