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The map label for this gene is yfcH [C]

Identifier: 62390497

GI number: 62390497

Start: 1713704

End: 1715230

Strand: Direct

Name: yfcH [C]

Synonym: cg1819

Alternate gene names: 62390497

Gene position: 1713704-1715230 (Clockwise)

Preceding gene: 62390487

Following gene: 62390498

Centisome position: 52.2

GC content: 58.02

Gene sequence:

>1527_bases
GTGAGTCTGACCACAAGCCATTTTATTCCTTTTCCCCGAGAAATGGTCTGGGATTGGCATACCCGCAAGGGCGCTGTCGC
ACGTCTGACTCCCCCATTCATCCCACTTAACCCCATTACGCAGGCAGAACGCCTCGCCGACGGCACCACCATCTTCAGTC
TCCCCGCGGGACTTAAATGGGTGGCACGCCACGATTTATCCGGGTTTTTGAACGGGTCACGCTTCACCGACGTCTGCCTC
ACCGCCCCTGTGAAGGCCCTCGCAAACTGGCGCCACGTGCATAATTTCGTCGACCAAGACGGCGGCACACTCATCACAGA
TTCCGTGAGCACCCGCCTACCGGCATCCACACTCACGGGCATGTTCGCCTATCGCCAAACTCAGCTCATCGAAGACCTAA
AATTCTTAAGTAGAACAAGCACGCTTTTCGACGGCTCCCCCCTCACCGTAGCCATCACCGGCTCCAGGGGGCTCGTCGGC
CGCGCGCTGACAGCGCAGCTGCAAACCGGCGGCCACGAAGTCATCCAACTCGTGCGCAAAGAACCCAAACCTGGCAAACG
TTTCTGGGATCCACTCAACCCAGCATCCGATCTCCTCGACGGCGCGGATGTTTTGGTTCACCTTGCCGGCGAACCGATCT
TCGGGCGATTCAACGACTCCCACAAAGAAGCCATCCGCGAGTCCCGCGTACTTCCCACCAAATTCCTCGCAGAATTAGTT
GCCGAATCCACCCAGTGCACCACCATGATTTCCGCCTCTGCAGTTGGATTCTATGGTCACGACCGCGGCGACGAGATCCT
GACCGAAGAATCCGAATCCGGCGATGATTTCCTCGCCGAGGTCTGTAGGGATTGGGAACACGCCACTGCTCCTGCCTCAG
ATGCAGGAAAGCGCGTAGCCTTCATTCGCACCGGCGTGGCCCTCAGTGGACGCGGTGGCATGCTTCCCCTGCTGAAAACC
CTGTTCTCCACCGGACTAGGCGGAAAATTCGGCGATGGCACCTCCTGGTTCAGCTGGATCGCCATCGATGACCTCACCGA
CATCTACTACCGCGCCATCGTGGACGCCCAGATCTCCGGCCCCATCAACGCGGTAGCCCCCAATCCAGTCTCCAATGCGG
ACATGACCAAGATTCTGGCCACCAGCATGCACCGTCCCGCATTCATCCAAATTCCTTCCCTCGGCCCCAAAATTCTGCTC
GGAAGCCAAGGCGCTGAAGAGCTAGCCCTGGCGTCCCAACGCACCGCCCCAGCAGCACTGGAAAACCTCAGCCACACCTT
CCGCTACACCGACATCGGGGCCGCCATCGCACACGAACTTGGCTACGAACAACTCGCAGATTTCGCCCAACAGCAAGAAA
TCGAAGCCGAACGCAAACAGGAACGAGCCGAACTCAAAGCCGCCAAGAAGATCGCCAAGAAAGCCCCAGTCCTAGAGGAA
TCCCCCACCAACCTGGAAGATCCCGAAGAAGTAGAGCAAAGTATCCTTTCATCAATCCTCAATTTCCGCCGTAAGCGCAA
CGACTAA

Upstream 100 bases:

>100_bases
GGTACAGCATGCCAGTCGAATCTGTGACAATTGATCGTTGTAGGACACCCGGTGTATACCCACTGGGACCTCATAAATCC
ACTGACTTGGAGAAGCCCCT

Downstream 100 bases:

>100_bases
AACCACCATCTGTAGTGTGGTGGAAAAGTTACTTTTAAAAGGATTTTGGAAGGACTGAAACTCCCCAGTGCCTCAATCAC
CCACAGCACACGACCCCAAC

Product: nucleoside-diphosphate sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MSLTTSHFIPFPREMVWDWHTRKGAVARLTPPFIPLNPITQAERLADGTTIFSLPAGLKWVARHDLSGFLNGSRFTDVCL
TAPVKALANWRHVHNFVDQDGGTLITDSVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPLTVAITGSRGLVG
RALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELV
AESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKT
LFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILL
GSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGYEQLADFAQQQEIEAERKQERAELKAAKKIAKKAPVLEE
SPTNLEDPEEVEQSILSSILNFRRKRND

Sequences:

>Translated_508_residues
MSLTTSHFIPFPREMVWDWHTRKGAVARLTPPFIPLNPITQAERLADGTTIFSLPAGLKWVARHDLSGFLNGSRFTDVCL
TAPVKALANWRHVHNFVDQDGGTLITDSVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPLTVAITGSRGLVG
RALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELV
AESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKT
LFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILL
GSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGYEQLADFAQQQEIEAERKQERAELKAAKKIAKKAPVLEE
SPTNLEDPEEVEQSILSSILNFRRKRND
>Mature_507_residues
SLTTSHFIPFPREMVWDWHTRKGAVARLTPPFIPLNPITQAERLADGTTIFSLPAGLKWVARHDLSGFLNGSRFTDVCLT
APVKALANWRHVHNFVDQDGGTLITDSVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPLTVAITGSRGLVGR
ALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVA
ESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTL
FSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLG
SQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGYEQLADFAQQQEIEAERKQERAELKAAKKIAKKAPVLEES
PTNLEDPEEVEQSILSSILNFRRKRND

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=294, Percent_Identity=32.6530612244898, Blast_Score=135, Evalue=8e-32,
Organism=Escherichia coli, GI1788642, Length=299, Percent_Identity=35.1170568561873, Blast_Score=173, Evalue=2e-44,
Organism=Drosophila melanogaster, GI28573846, Length=288, Percent_Identity=23.9583333333333, Blast_Score=112, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 55510; Mature: 55379

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTTSHFIPFPREMVWDWHTRKGAVARLTPPFIPLNPITQAERLADGTTIFSLPAGLKW
CCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCEEEECCCCHHH
VARHDLSGFLNGSRFTDVCLTAPVKALANWRHVHNFVDQDGGTLITDSVSTRLPASTLTG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCHHHHHH
MFAYRQTQLIEDLKFLSRTSTLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHC
EPKPGKRFWDPLNPASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELV
CCCCCCCCCCCCCCHHHHHCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH
AESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVA
HCCCHHHHHHHHHHEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEE
FIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISG
EEEECEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCC
PINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAAL
CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHCCCCHHHH
ENLSHTFRYTDIGAAIAHELGYEQLADFAQQQEIEAERKQERAELKAAKKIAKKAPVLEE
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPTNLEDPEEVEQSILSSILNFRRKRND
CCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLTTSHFIPFPREMVWDWHTRKGAVARLTPPFIPLNPITQAERLADGTTIFSLPAGLKW
CCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCEEEECCCCHHH
VARHDLSGFLNGSRFTDVCLTAPVKALANWRHVHNFVDQDGGTLITDSVSTRLPASTLTG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCHHHHHH
MFAYRQTQLIEDLKFLSRTSTLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHC
EPKPGKRFWDPLNPASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELV
CCCCCCCCCCCCCCHHHHHCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH
AESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVA
HCCCHHHHHHHHHHEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEE
FIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISG
EEEECEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCC
PINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAAL
CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHCCCCHHHH
ENLSHTFRYTDIGAAIAHELGYEQLADFAQQQEIEAERKQERAELKAAKKIAKKAPVLEE
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPTNLEDPEEVEQSILSSILNFRRKRND
CCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]