| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yhbJ [C]
Identifier: 62390473
GI number: 62390473
Start: 1687617
End: 1688546
Strand: Reverse
Name: yhbJ [C]
Synonym: cg1794
Alternate gene names: 62390473
Gene position: 1688546-1687617 (Counterclockwise)
Preceding gene: 62390474
Following gene: 62390472
Centisome position: 51.44
GC content: 52.58
Gene sequence:
>930_bases ATGATTCAATCCACTGGGGTCACGCACACTGATAAGTCTGCACAAGAAAATCCTGTGAAGTACAGGGACAATTTCACACC TGTCATCATCACCGGTATGTCAGGCGCAGGTCTGAGCACAGCAGCCCGAGTCCTCGAAGACTTGGGTTGGTATGTGGCGC ACAATATTCCACCACAGATCATCCTGGAATTAATTGATATGTGCGCTCGGGAAGATTCTCCCGTCGACAAAGTTGCAGTC GTGTGCGATGTGCGCTCCCGTGAATTCCGCGGAAGCCTCACCCAGGTTGTTTCAGAGCTGCGTGATAAGCAGCTCGATCC CACGGTGTTATTTCTGGAAGCACGCGATGAGGTGCTGATCAAGCGATTCGATAATGTGCGCCGCACCCATCCTTTGCAGG GCAGCCAAACCCTTCAGGTGGGTATTGAACGTGAACGAACCGTGCTGTCTCCTGTGAAGGAAGACGCTTCAGTGGTCATC GATACCTCGGATCTGTCCGTGCATGATTTGCGCCGCGCCATCGAATCCTCGTTTAGGACAATCGCCACGCGCACCCAGCA CGTCACCATTGAATCATTCGGTTTCAAACACGGCTCACCACGCGACGCCGACTTTGTTGTGGACGTGCGTTTCTTGCCGA ACCCATTCTGGGTTCCAGAGCTGCGCCCATTTAGGGGAGTGGACAAGCCAGTATCTGACTATGTGCTCTCCCAAAAAGGC GCAGAAGAATTTTTGAACAACTTTGTGGACATGCTCAAAGACATGCTTCCGGGATACCGCCACGAAGGAAAAAACTTCAT CACAATCGGTGTCGGCTGCACCGGTGGACACCACAGATCAGTTGCGGTGTCTGAAGAACTAGCCAAAAGAATCGCAGATC AGACCACGCTCGACGTGTCTGTAGTACACCGCGATATTAACCGCCACTAG
Upstream 100 bases:
>100_bases TGAGGACATTTCCCAAGTGAAAGGCTTCGGCCCGAAACTTGCGGAGGCTGTCTATGAAGGTCTTCACGCGTCAAAATAAG TAGATCGCTAGGATGTAACC
Downstream 100 bases:
>100_bases GAAAGGGGCCAACTAATTGACAACCTTCTTCGATGCCCCAAATGGCACACCAGAAGAAGCTCCACTTGAGCGACCACGTG TAATCACCAGCTTGGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MIQSTGVTHTDKSAQENPVKYRDNFTPVIITGMSGAGLSTAARVLEDLGWYVAHNIPPQIILELIDMCAREDSPVDKVAV VCDVRSREFRGSLTQVVSELRDKQLDPTVLFLEARDEVLIKRFDNVRRTHPLQGSQTLQVGIERERTVLSPVKEDASVVI DTSDLSVHDLRRAIESSFRTIATRTQHVTIESFGFKHGSPRDADFVVDVRFLPNPFWVPELRPFRGVDKPVSDYVLSQKG AEEFLNNFVDMLKDMLPGYRHEGKNFITIGVGCTGGHHRSVAVSEELAKRIADQTTLDVSVVHRDINRH
Sequences:
>Translated_309_residues MIQSTGVTHTDKSAQENPVKYRDNFTPVIITGMSGAGLSTAARVLEDLGWYVAHNIPPQIILELIDMCAREDSPVDKVAV VCDVRSREFRGSLTQVVSELRDKQLDPTVLFLEARDEVLIKRFDNVRRTHPLQGSQTLQVGIERERTVLSPVKEDASVVI DTSDLSVHDLRRAIESSFRTIATRTQHVTIESFGFKHGSPRDADFVVDVRFLPNPFWVPELRPFRGVDKPVSDYVLSQKG AEEFLNNFVDMLKDMLPGYRHEGKNFITIGVGCTGGHHRSVAVSEELAKRIADQTTLDVSVVHRDINRH >Mature_309_residues MIQSTGVTHTDKSAQENPVKYRDNFTPVIITGMSGAGLSTAARVLEDLGWYVAHNIPPQIILELIDMCAREDSPVDKVAV VCDVRSREFRGSLTQVVSELRDKQLDPTVLFLEARDEVLIKRFDNVRRTHPLQGSQTLQVGIERERTVLSPVKEDASVVI DTSDLSVHDLRRAIESSFRTIATRTQHVTIESFGFKHGSPRDADFVVDVRFLPNPFWVPELRPFRGVDKPVSDYVLSQKG AEEFLNNFVDMLKDMLPGYRHEGKNFITIGVGCTGGHHRSVAVSEELAKRIADQTTLDVSVVHRDINRH
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=266, Percent_Identity=40.2255639097744, Blast_Score=192, Evalue=3e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1591_CORGL (Q8NQ56)
Other databases:
- EMBL: BA000036 - EMBL: BX927152 - RefSeq: NP_600805.1 - RefSeq: YP_225875.1 - ProteinModelPortal: Q8NQ56 - GeneID: 1019559 - GeneID: 3343500 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg1794 - KEGG: cgl:NCgl1529 - HOGENOM: HBG289732 - OMA: GIGCTGG - PhylomeDB: Q8NQ56 - ProtClustDB: PRK05416 - BioCyc: CGLU196627:CG1794-MONOMER - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 34711; Mature: 34711
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQSTGVTHTDKSAQENPVKYRDNFTPVIITGMSGAGLSTAARVLEDLGWYVAHNIPPQI CCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHH ILELIDMCAREDSPVDKVAVVCDVRSREFRGSLTQVVSELRDKQLDPTVLFLEARDEVLI HHHHHHHHCCCCCCHHHEEEEECCCCHHHCCHHHHHHHHHHHCCCCCEEEEEECCHHHHH KRFDNVRRTHPLQGSQTLQVGIERERTVLSPVKEDASVVIDTSDLSVHDLRRAIESSFRT HHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH IATRTQHVTIESFGFKHGSPRDADFVVDVRFLPNPFWVPELRPFRGVDKPVSDYVLSQKG HHHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCC AEEFLNNFVDMLKDMLPGYRHEGKNFITIGVGCTGGHHRSVAVSEELAKRIADQTTLDVS HHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHH VVHRDINRH HHHHHHCCC >Mature Secondary Structure MIQSTGVTHTDKSAQENPVKYRDNFTPVIITGMSGAGLSTAARVLEDLGWYVAHNIPPQI CCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHH ILELIDMCAREDSPVDKVAVVCDVRSREFRGSLTQVVSELRDKQLDPTVLFLEARDEVLI HHHHHHHHCCCCCCHHHEEEEECCCCHHHCCHHHHHHHHHHHCCCCCEEEEEECCHHHHH KRFDNVRRTHPLQGSQTLQVGIERERTVLSPVKEDASVVIDTSDLSVHDLRRAIESSFRT HHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH IATRTQHVTIESFGFKHGSPRDADFVVDVRFLPNPFWVPELRPFRGVDKPVSDYVLSQKG HHHHHHEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCC AEEFLNNFVDMLKDMLPGYRHEGKNFITIGVGCTGGHHRSVAVSEELAKRIADQTTLDVS HHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHH VVHRDINRH HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626