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The map label for this gene is tnp13b(ISCg13b)

Identifier: 62390462

GI number: 62390462

Start: 1673190

End: 1674593

Strand: Direct

Name: tnp13b(ISCg13b)

Synonym: cg1782

Alternate gene names: NA

Gene position: 1673190-1674593 (Clockwise)

Preceding gene: 62390460

Following gene: 62390487

Centisome position: 50.97

GC content: 59.97

Gene sequence:

>1404_bases
GTGCAATTATTACACAACCCCACAGCGATGTCCGCATCCTTTGATGACCCCAACCTCATCTCGCTTGCTGGACTGGTTCC
AACCATGCACTTAGCCGATGCTGCCAGCCTGTCCACCTTGGCCCAGGACCGGTTGAGCATCACCGGTGATAAAGGTGCCA
ATGCTGGTGCGAAGATCGCCTCCCTAGTCGCGGGCATGGTCGCCGGTGCTGATTCCATCGATGACATGGATGTACTCCGC
CACGGAGGTATGCGCCGACTTTTCGACCGGATCTACGCCCCATCCACATTGGGGTCTTTTCTGCGGGCCTTCACTTTCGG
CCACGTACGCCAACTCGATGCTGTGGCCTCCCGATTCCTGGTCAACCTGGCCAGGCAGGCACCACACCTGGTGCCACCAC
CACCGGCAGGCAGTGGCGGTAACGGGTATGTGTTCGTTGATGTTGATGACACCATCATTGAAGTCCACGGCCACACCAAA
CAAGGTGCCGGCTTTGGTTACTCCGGTATCCGTGGACTCAACGCCTTGCTGGCCACGGTCACCACCGCACAGTCCGCCCC
CATCATTGTGGGCCAACGATTGCGGAAAGGATCGTGTGGTTCCCCACGAGGGGCCCACCGCCTGATCGCCGATGCGATGA
CCACCACCAGGCGCCTGCCCGGGATGGAGGATAAGAAAATCCTCGTCCGGGCAGATTCGGCGTATTATGGTCATCCCAGT
GTCAGTGTGGCCCTAAGGTCCGGTGCGGATGTGTCCGTCACGGTGCGGATGACCCCGAACGTCAAGAAAGCGATCGTCGC
GATCCCGGAAGATGCGTGGCAGACGATTCAGTACACCGATGCGATCTTCGATGAGGCATCACAATCGTGGATCTCCTTAG
CCCAGGTCGCCGAAGTGCCTTTCACCGCGTTTACCTCCCGGAAGAAGGCCGACCATGTTCCCGGACGCTTGGTGGTACGC
CGGATTCCTGAGCTGAATAAGAAGGATGTGTATCAGCCGGGCTTGTTTGATCTTCACCGCTTCCATGCGGTCTTCACCAC
CGCCGACCCAGGCGTGCTGGATACTGTTGCTGCGGATAAAACCCACCGTCAGCACGCGATCATTGAACAGGTCAACGCAG
ACTTGAAGGCAAGCGCGTTGGCGCATCTGCCGTCGGGGACGTTCACCGCCAACAGTGCCTGGCTCGTATGCGCGGTCATG
GCGTTTAATCTCACCCGTGCCACCGGGGTTATCGCTGCAGGCGGGATGGCCAAGGCCACCACCGCGACGATCCGGCGGAC
ACTGATGGCCGTTCCAGCCCGGGTCGCCCGCAGGTCCCGCCGACTGGTGCTCCACCTTCCCGAGGGGTGGACGTGGCAAC
CACAGTGGCAGAAACTGTTTGATCACGGCCATTCACCACCGTAA

Upstream 100 bases:

>100_bases
TCAGGTGTAACGGCGTGGGAAAATAGGAAATGCCCTCCTGAACTGGAAGAATCAAGCTTGCTTAGAGTCCTGATTCACCT
GCCAGAAAGGCACCTCACAG

Downstream 100 bases:

>100_bases
CCGGTAGCTCCCTGACCACCCAGCCGAGCTTTCGGCGTGAGATGACAACAATTCGTGGAACAACCAGAACAAGACGTGAT
CTGGCGATCACCCCTACCCG

Product: transposase

Products: NA

Alternate protein names: Transposase; Transposase IS4 Family Protein; Transposase IS4 Family; IS4 Family Transposase

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MQLLHNPTAMSASFDDPNLISLAGLVPTMHLADAASLSTLAQDRLSITGDKGANAGAKIASLVAGMVAGADSIDDMDVLR
HGGMRRLFDRIYAPSTLGSFLRAFTFGHVRQLDAVASRFLVNLARQAPHLVPPPPAGSGGNGYVFVDVDDTIIEVHGHTK
QGAGFGYSGIRGLNALLATVTTAQSAPIIVGQRLRKGSCGSPRGAHRLIADAMTTTRRLPGMEDKKILVRADSAYYGHPS
VSVALRSGADVSVTVRMTPNVKKAIVAIPEDAWQTIQYTDAIFDEASQSWISLAQVAEVPFTAFTSRKKADHVPGRLVVR
RIPELNKKDVYQPGLFDLHRFHAVFTTADPGVLDTVAADKTHRQHAIIEQVNADLKASALAHLPSGTFTANSAWLVCAVM
AFNLTRATGVIAAGGMAKATTATIRRTLMAVPARVARRSRRLVLHLPEGWTWQPQWQKLFDHGHSPP

Sequences:

>Translated_467_residues
MQLLHNPTAMSASFDDPNLISLAGLVPTMHLADAASLSTLAQDRLSITGDKGANAGAKIASLVAGMVAGADSIDDMDVLR
HGGMRRLFDRIYAPSTLGSFLRAFTFGHVRQLDAVASRFLVNLARQAPHLVPPPPAGSGGNGYVFVDVDDTIIEVHGHTK
QGAGFGYSGIRGLNALLATVTTAQSAPIIVGQRLRKGSCGSPRGAHRLIADAMTTTRRLPGMEDKKILVRADSAYYGHPS
VSVALRSGADVSVTVRMTPNVKKAIVAIPEDAWQTIQYTDAIFDEASQSWISLAQVAEVPFTAFTSRKKADHVPGRLVVR
RIPELNKKDVYQPGLFDLHRFHAVFTTADPGVLDTVAADKTHRQHAIIEQVNADLKASALAHLPSGTFTANSAWLVCAVM
AFNLTRATGVIAAGGMAKATTATIRRTLMAVPARVARRSRRLVLHLPEGWTWQPQWQKLFDHGHSPP
>Mature_467_residues
MQLLHNPTAMSASFDDPNLISLAGLVPTMHLADAASLSTLAQDRLSITGDKGANAGAKIASLVAGMVAGADSIDDMDVLR
HGGMRRLFDRIYAPSTLGSFLRAFTFGHVRQLDAVASRFLVNLARQAPHLVPPPPAGSGGNGYVFVDVDDTIIEVHGHTK
QGAGFGYSGIRGLNALLATVTTAQSAPIIVGQRLRKGSCGSPRGAHRLIADAMTTTRRLPGMEDKKILVRADSAYYGHPS
VSVALRSGADVSVTVRMTPNVKKAIVAIPEDAWQTIQYTDAIFDEASQSWISLAQVAEVPFTAFTSRKKADHVPGRLVVR
RIPELNKKDVYQPGLFDLHRFHAVFTTADPGVLDTVAADKTHRQHAIIEQVNADLKASALAHLPSGTFTANSAWLVCAVM
AFNLTRATGVIAAGGMAKATTATIRRTLMAVPARVARRSRRLVLHLPEGWTWQPQWQKLFDHGHSPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50124; Mature: 50124

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLHNPTAMSASFDDPNLISLAGLVPTMHLADAASLSTLAQDRLSITGDKGANAGAKIA
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH
SLVAGMVAGADSIDDMDVLRHGGMRRLFDRIYAPSTLGSFLRAFTFGHVRQLDAVASRFL
HHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VNLARQAPHLVPPPPAGSGGNGYVFVDVDDTIIEVHGHTKQGAGFGYSGIRGLNALLATV
HHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
TTAQSAPIIVGQRLRKGSCGSPRGAHRLIADAMTTTRRLPGMEDKKILVRADSAYYGHPS
HHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCC
VSVALRSGADVSVTVRMTPNVKKAIVAIPEDAWQTIQYTDAIFDEASQSWISLAQVAEVP
EEEEEECCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FTAFTSRKKADHVPGRLVVRRIPELNKKDVYQPGLFDLHRFHAVFTTADPGVLDTVAADK
HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHCCC
THRQHAIIEQVNADLKASALAHLPSGTFTANSAWLVCAVMAFNLTRATGVIAAGGMAKAT
HHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHEEECCCHHHH
TATIRRTLMAVPARVARRSRRLVLHLPEGWTWQPQWQKLFDHGHSPP
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MQLLHNPTAMSASFDDPNLISLAGLVPTMHLADAASLSTLAQDRLSITGDKGANAGAKIA
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH
SLVAGMVAGADSIDDMDVLRHGGMRRLFDRIYAPSTLGSFLRAFTFGHVRQLDAVASRFL
HHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VNLARQAPHLVPPPPAGSGGNGYVFVDVDDTIIEVHGHTKQGAGFGYSGIRGLNALLATV
HHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
TTAQSAPIIVGQRLRKGSCGSPRGAHRLIADAMTTTRRLPGMEDKKILVRADSAYYGHPS
HHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCC
VSVALRSGADVSVTVRMTPNVKKAIVAIPEDAWQTIQYTDAIFDEASQSWISLAQVAEVP
EEEEEECCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FTAFTSRKKADHVPGRLVVRRIPELNKKDVYQPGLFDLHRFHAVFTTADPGVLDTVAADK
HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHCCC
THRQHAIIEQVNADLKASALAHLPSGTFTANSAWLVCAVMAFNLTRATGVIAAGGMAKAT
HHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHEEECCCHHHH
TATIRRTLMAVPARVARRSRRLVLHLPEGWTWQPQWQKLFDHGHSPP
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA