| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yejH [C]
Identifier: 62390453
GI number: 62390453
Start: 1660255
End: 1662606
Strand: Direct
Name: yejH [C]
Synonym: cg1770
Alternate gene names: 62390453
Gene position: 1660255-1662606 (Clockwise)
Preceding gene: 62390452
Following gene: 62390454
Centisome position: 50.58
GC content: 56.51
Gene sequence:
>2352_bases ATGTCCGAACAAAGACTCGATCAGCTTGAGCGACGGCTTTCTGAACTGGAACGGGAGATCGCCGCGATTCGTCAGGAGAT CCGCCAGGAACGCCTAGTGCTTCCGGAACCGGAACCTGTGAAAGTTGATACAGTCATCGCCACCGAAGCGACCGGAGTCA ATGCATCGTCGGGTCCGGAGGCGAAGATCGCTTTGTTCATGGAGAGGTTTAGTGGTCGCCACGATGTGTATGCGCGGCGC TGGACCAGCAGAAAAACGGGCAAAAGTGGATGGTCGCCGGCTACTCGCCAGGGTTTTTACTCAAAAGACACCACACCGAA GGACTATCTCCCCTTCACCGTTGACACCGTCAATGCGCATCTGCGCCGGGGCGGCGACCATATCGGTCTCTATGTGATGG TCCCCATCGACACGTGCAAACTTCTCGCCTGCGATTTCGACGATGGCACCTGGAAGCAAGATGCGGCCGCTTTCGTGTCA GCCTGCACCGACCACGGAATCGATGCGTTGGCTGAAATTTCTCGATCCGACGACGGCGCCCCCGTGTGGATATTTTTCGA TACCCCAATCTCCGCGATGCTGGCTCGGCGCCTAGGTTTTGCCATGCTCCGCCAAGCCATGAACTCCCGCCCTGACATGG ATATGTCTTCTTATGATCGCTTCTTCCCTGCTCAAGACACCATCGCAACGCGCGCAAACGGAAGCGCACGGCTGGGAAAT TTGATCGCGCTGCCCCTCAACGGCGACTGTCGAGCCCGCAACACCGCCGTCTTCGCCGATTCGGAAACGTGGGTTCCCTT CGAAGATCCTTTCGCAGCGCTCGCGGCCATCACGCCACTAGCCACCGAAAAAATCGAGCAGATCCTTGCCACCACGCAGG AAAAATTTGGCCCCGAACCCGAACACATCAAACGCCCCACCCGCGCCGAACTCAAACAGGTTAAAGCCAACGGCGAAACC ATCAAACTCACCATCACCAACGAGCTGAGCGTCCCCACCGAAAGGTTACCCGCGGCCGTCATCGCGGAGATTAAACACCG GGCGGTAATCCCAAACCCTGAGTTTTATCGTCGACAAGCGCAAAGATTTTCGACCTTCGGCGTGCCGCGCATCGTCATCC GCTTCGCCCAGGCCGAGCAGCGCTTGCTGCTCCCACGCGGGCTTGTCGACGACACCCTCCGGATCCTCACCCTCGCCGGG TACAAAGTCAGCGTCATCTGGCCTCGGCAAACTCGGAAAACCATCGACGCGTCTTTCGAGGGCGAATTGCGATCCATGCA ACAAGAGGGAATCGACTCGCTCAAAGGCCAACGCACCGGCGTATTGGTAGCACCGCCGGGCGCTGGAAAAACAGTGATGG CCTGTGCACTCATCGCGAACAGAAAAATCCCCACCGCAGTGATAGTCAACCGTGCAGAATTGATTTCCCAATGGCGGGAT CGTCTCGCGCAATACCTGAGCATCGACGCAGACTCCATCGGACAGATCGGCGCGGGCCGACGCAAAACCACCGGAATTAT CGATCTCATCACCGTCCAATCCTTGAGCCGTAAAGATTCCGATCCGAAAATTTTGGAACAATACGGCCAAATCATCGTCG ACGAGTGCCACAACATCGCAGCCCCAGGCGCCGAAGCCGCATTGAACCAGGTCAAGGCCCCCTACTGGCTGGGTCTAACC GCCACGCCGTTTCGTTCAGACCACATGGATGAAATCATCACCATGCAGTGCGGTCCTGTGCGCCACCGCATGGAAGTGGC AACAGACAATGAACAGCGCTTGATTCACATCCACGAAACCTCTTTCGACTCTGAGGAAACCACCGAAATCCAGGATCTCT ACAATGAGCTCGCGGTCGATTCTGCCCGAAATGCGCAAATCACTGCCGAAGTGCACAAAGCGCTTGAAGCTGGCGACCGA TGTCTAGTTTTGGTCAACCGAATTGCAGCCCTTGAAGCACTGACCAGCAGTATTACCGAATCTGGCGATCACACTGTCTT AGTGATGCATGGCCGCCAAACCCAAGAGGAGCGAGTTCACCTTCGTGCGCAACTTGCCTCATTGAGTGAAAAGCAGGATC CGTTTGTACTGGTCGCGATGAATAAAGTCGCCGGCGAAGGCCTTGACATCCCCAGCCTCAACACGCTGTTTTTGGCAGCG CCGGTGTCCTTCAAGGGGCTGGTGATTCAGCAAATCGGCCGAGTTACTCGCGCAACCGGTGATCAAAACGCTCCTCCGGT GACTGCCACGGTCCATGATTTTGTTGATTCCAAGATTCCGACACTCAAACGCATGCACGGTCGCCGATTGCGGGCTATGC AAAAGGAAGGATTCGCTGTTTCGGAGCCTTGA
Upstream 100 bases:
>100_bases GTATCGGTAAAAGGCCCAATCAAGGATTCTTGGTTGGGTCTTTTTCCATGCTTTTCATGCTTCGAACAGTCCAGAATAGC CCTGACCTAGACTTAGAGCT
Downstream 100 bases:
>100_bases GGAGGACCAGACCAAACCAGCGTGCCCACGGTTGGCCATTTCAGGATCCGTGGGCACGCTGGTTTGGTTTATCAACCTCG AAACCGGTCACAGCTGCCCA
Product: superfamily II DNA/RNA helicase
Products: NA
Alternate protein names: Helicase; Type III Restriction Res Subunit; DNA Repair Helicase; Superfamily II DNA/RNA Helicase; DNA Repair Helicase Rad; Type III Restriction Res Subunit Family; DNA Repair Helicase RAD; ATP-Dependent Helicase; Helicase Domain Protein; DNA Repair Protein Rad; Phage DEAD Box Family Helicase; Helicase-Like Protein; DNA Or RNA Helicase Of Superfamily II; DNA/RNA Repair Helicase; DNA Repair Protein RAD; DNA/RNA Helicase; DEAD/DEAH Box Family Helicase; Helicase DNA Repair; Helicase DNA Repair Rad; XPB/RAD25-Related Helicase; ATP-Dependent DNA Helicase; Helicase Protein; ATP-Dependet DEAD/DEAH Box Helicase; Type III Restriction Protein; Nucleic Acid ATP-Dependent Helicase; Helicase Domain-Containing Protein; DNA Repair Protein; DEAD/DEAH Box Helicase; Type III Restriction- System Subunit Res; ATP-Dependent RNA Helicase; RAD25-Type DNA Repair Helicase; DNA Or RNA Helicase Of Superfamily II-Like Protein; Restriction Endonuclease Family Protein; Helicase ATP-Dependent Intein-Containing; Type III Restriction; DNA Or RNA Helicases Of Superfamily II; DNA Helicase; DNA/RNA Helicase Superfamily II
Number of amino acids: Translated: 783; Mature: 782
Protein sequence:
>783_residues MSEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKVDTVIATEATGVNASSGPEAKIALFMERFSGRHDVYARR WTSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTVDTVNAHLRRGGDHIGLYVMVPIDTCKLLACDFDDGTWKQDAAAFVS ACTDHGIDALAEISRSDDGAPVWIFFDTPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGN LIALPLNGDCRARNTAVFADSETWVPFEDPFAALAAITPLATEKIEQILATTQEKFGPEPEHIKRPTRAELKQVKANGET IKLTITNELSVPTERLPAAVIAEIKHRAVIPNPEFYRRQAQRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAG YKVSVIWPRQTRKTIDASFEGELRSMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIANRKIPTAVIVNRAELISQWRD RLAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIAAPGAEAALNQVKAPYWLGLT ATPFRSDHMDEIITMQCGPVRHRMEVATDNEQRLIHIHETSFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDR CLVLVNRIAALEALTSSITESGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAA PVSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAVSEP
Sequences:
>Translated_783_residues MSEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKVDTVIATEATGVNASSGPEAKIALFMERFSGRHDVYARR WTSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTVDTVNAHLRRGGDHIGLYVMVPIDTCKLLACDFDDGTWKQDAAAFVS ACTDHGIDALAEISRSDDGAPVWIFFDTPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGN LIALPLNGDCRARNTAVFADSETWVPFEDPFAALAAITPLATEKIEQILATTQEKFGPEPEHIKRPTRAELKQVKANGET IKLTITNELSVPTERLPAAVIAEIKHRAVIPNPEFYRRQAQRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAG YKVSVIWPRQTRKTIDASFEGELRSMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIANRKIPTAVIVNRAELISQWRD RLAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIAAPGAEAALNQVKAPYWLGLT ATPFRSDHMDEIITMQCGPVRHRMEVATDNEQRLIHIHETSFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDR CLVLVNRIAALEALTSSITESGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAA PVSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAVSEP >Mature_782_residues SEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKVDTVIATEATGVNASSGPEAKIALFMERFSGRHDVYARRW TSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTVDTVNAHLRRGGDHIGLYVMVPIDTCKLLACDFDDGTWKQDAAAFVSA CTDHGIDALAEISRSDDGAPVWIFFDTPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGNL IALPLNGDCRARNTAVFADSETWVPFEDPFAALAAITPLATEKIEQILATTQEKFGPEPEHIKRPTRAELKQVKANGETI KLTITNELSVPTERLPAAVIAEIKHRAVIPNPEFYRRQAQRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAGY KVSVIWPRQTRKTIDASFEGELRSMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIANRKIPTAVIVNRAELISQWRDR LAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIAAPGAEAALNQVKAPYWLGLTA TPFRSDHMDEIITMQCGPVRHRMEVATDNEQRLIHIHETSFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDRC LVLVNRIAALEALTSSITESGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAAP VSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAVSEP
Specific function: Unknown
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322048, Length=357, Percent_Identity=20.1680672268908, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86783; Mature: 86652
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKVDTVIATEATGVNASSGPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCC AKIALFMERFSGRHDVYARRWTSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTVDTVNAH HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEHHHHHH LRRGGDHIGLYVMVPIDTCKLLACDFDDGTWKQDAAAFVSACTDHGIDALAEISRSDDGA HHCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCC PVWIFFDTPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGN EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCC LIALPLNGDCRARNTAVFADSETWVPFEDPFAALAAITPLATEKIEQILATTQEKFGPEP EEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EHIKRPTRAELKQVKANGETIKLTITNELSVPTERLPAAVIAEIKHRAVIPNPEFYRRQA HHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHH QRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAGYKVSVIWPRQTRKTIDASFE HHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCEEEEEECCHHHHHHCCCCC GELRSMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIANRKIPTAVIVNRAELISQWRD HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RLAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIA HHHHHHCCCCHHCCCCCCCCCCCCCEEEHEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCC APGAEAALNQVKAPYWLGLTATPFRSDHMDEIITMQCGPVRHRMEVATDNEQRLIHIHET CCCHHHHHHHCCCCEEECCCCCCCCCCCHHHEEEECCCCCHHHEEECCCCCCEEEEEECC SFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDRCLVLVNRIAALEALTSSITE CCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC SGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAA CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCEEEEEC PVSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAV CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC SEP CCC >Mature Secondary Structure SEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKVDTVIATEATGVNASSGPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCC AKIALFMERFSGRHDVYARRWTSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTVDTVNAH HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEHHHHHH LRRGGDHIGLYVMVPIDTCKLLACDFDDGTWKQDAAAFVSACTDHGIDALAEISRSDDGA HHCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCC PVWIFFDTPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGN EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCC LIALPLNGDCRARNTAVFADSETWVPFEDPFAALAAITPLATEKIEQILATTQEKFGPEP EEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EHIKRPTRAELKQVKANGETIKLTITNELSVPTERLPAAVIAEIKHRAVIPNPEFYRRQA HHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHH QRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAGYKVSVIWPRQTRKTIDASFE HHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCEEEEEECCHHHHHHCCCCC GELRSMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIANRKIPTAVIVNRAELISQWRD HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RLAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIA HHHHHHCCCCHHCCCCCCCCCCCCCEEEHEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCC APGAEAALNQVKAPYWLGLTATPFRSDHMDEIITMQCGPVRHRMEVATDNEQRLIHIHET CCCHHHHHHHCCCCEEECCCCCCCCCCCHHHEEEECCCCCHHHEEECCCCCCEEEEEECC SFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDRCLVLVNRIAALEALTSSITE CCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC SGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAA CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCEEEEEC PVSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAV CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC SEP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA