| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62390428
Identifier: 62390428
GI number: 62390428
Start: 1633406
End: 1634794
Strand: Direct
Name: 62390428
Synonym: cg1743
Alternate gene names: NA
Gene position: 1633406-1634794 (Clockwise)
Preceding gene: 161486718
Following gene: 62390429
Centisome position: 49.76
GC content: 53.64
Gene sequence:
>1389_bases ATGGATGATTTTTCTGCATCGCTAGGTTTTACTGACCGTTCCTCGAGGGGAATTCTGGACACCATCGAGATGATTGAGAA GTATCGTCTTGATATTCGCACCGTGACCATGGGAATCAGCCTGTTGGAATGCGCGCGTGGCTCGATGGAAGAGACCGCGA CGGCTGTTTATGATCGCGTGACGTCACAGGCTGCACGTCTGGTTGAGGTTTGTGAAGGCATTGAGCGTGAATTGGGCATT CCCATTGTGAATAAGCGCATCTCGGTGACTCCAATTGCCCTGGTGACTGCTGGTTGCAGTGGCGATCCCGTTGACGTTGC TCGAGCCTTAGATAAGGCAGCAAAAGATGTCGGAGTGAACTTCATCGGCGGGTATTCAGCACTGGTTGAAAAAGGTGGAA CCACCTCCGATATTCGGCTGATCCGCTCCATTCCCGAGGCATTGAGCACAACCGATGTGGTGTGTGGATCCGTCAATGTG GCGTCGTCTCGCGCGGGTATCAACATGAACGCAGTCAATGAGATGGGCAAGGTGGTCAAGCAAGCAGCTGAATTGACCAA AGATCGCTCCGCCATCGCATGTGCAAAGCTAGTGGTCTTTGCCAATTCTGTGGGCGATAATCCATTCATGGCTGGCGCTT TCCACGGCATTGAGGAGCCGGATTGTGTGGTCAGCGTTGGTGTCTCAGGACCAGGCGTGGTTAGTCGCGCGCTGGGCAAT CTTCAAGGTGCCACCCTTGATCAAGTCGCAGAAGAGATCAAGAAAGCGGCCTTCAAGATCACTCGTACTGGACAACTGGT TGGTGCGATGGCCTCAGAACGCCTAGGAGTTCCTTTCGGCATCGTTGATCTTTCGCTCGCTCCCACTGCTGAAGTGGGCG ATTCCGTGGCAAATATCCTTGAGGTCATGGGTCTTGACCAGGTGGGCACACATGGCACCACCGCGGCACTCGCACTGCTC AACGACGCGGTGAAAAAGGGTGGCATGATGGCCTGCTCACGTGTCGGCGGCTTGTCCGGATCCTTCATTCCAGTTTCTGA AGATAAAGGCATGATCGATGCGGTTCGCACAGGAGCAATTTCTATTGACAAGCTCGAAGCGATGACCGCGATCTGCTCAG TTGGTTTGGATATGATTGCGATCCCTGGCGACACCCCGGCGGAAACTATTTCGGGCATGATCGCGGACGAAGCAGCCATC GGTGTGATGAATCATAAGACTACAGCTGTGCGTGTTATTCCTGTTCCAGGAACTGTCCCTGGCGATGAGGTAGATTTCGG TGGCTTGCTGGGTTACGCGCCGGTCATTCCAGTAAATACCGTGGGAAATAGTGAGTTTATTCACCGCGGCGGCTTCATTC CAGCACCCGTTCACGGGTTTAGAAACTAG
Upstream 100 bases:
>100_bases TCAGGAACGCATGAAGCCAGTGGAAAAGGAACAGGGCTTGGTTATTCGTATCCAGTCTGAAGCCTTGTTCAACGCGGTTA ATGAGATCTAGGGGGTGCAC
Downstream 100 bases:
>100_bases GAGATCCGGGGCCTTTACCTGCCATTTTCCAAATTCAAAGGTTAAAGAGCTGTTCACCTCATCGTGGGGTGAGCAGATCT GCTGAGGCGTATCATGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MDDFSASLGFTDRSSRGILDTIEMIEKYRLDIRTVTMGISLLECARGSMEETATAVYDRVTSQAARLVEVCEGIERELGI PIVNKRISVTPIALVTAGCSGDPVDVARALDKAAKDVGVNFIGGYSALVEKGGTTSDIRLIRSIPEALSTTDVVCGSVNV ASSRAGINMNAVNEMGKVVKQAAELTKDRSAIACAKLVVFANSVGDNPFMAGAFHGIEEPDCVVSVGVSGPGVVSRALGN LQGATLDQVAEEIKKAAFKITRTGQLVGAMASERLGVPFGIVDLSLAPTAEVGDSVANILEVMGLDQVGTHGTTAALALL NDAVKKGGMMACSRVGGLSGSFIPVSEDKGMIDAVRTGAISIDKLEAMTAICSVGLDMIAIPGDTPAETISGMIADEAAI GVMNHKTTAVRVIPVPGTVPGDEVDFGGLLGYAPVIPVNTVGNSEFIHRGGFIPAPVHGFRN
Sequences:
>Translated_462_residues MDDFSASLGFTDRSSRGILDTIEMIEKYRLDIRTVTMGISLLECARGSMEETATAVYDRVTSQAARLVEVCEGIERELGI PIVNKRISVTPIALVTAGCSGDPVDVARALDKAAKDVGVNFIGGYSALVEKGGTTSDIRLIRSIPEALSTTDVVCGSVNV ASSRAGINMNAVNEMGKVVKQAAELTKDRSAIACAKLVVFANSVGDNPFMAGAFHGIEEPDCVVSVGVSGPGVVSRALGN LQGATLDQVAEEIKKAAFKITRTGQLVGAMASERLGVPFGIVDLSLAPTAEVGDSVANILEVMGLDQVGTHGTTAALALL NDAVKKGGMMACSRVGGLSGSFIPVSEDKGMIDAVRTGAISIDKLEAMTAICSVGLDMIAIPGDTPAETISGMIADEAAI GVMNHKTTAVRVIPVPGTVPGDEVDFGGLLGYAPVIPVNTVGNSEFIHRGGFIPAPVHGFRN >Mature_462_residues MDDFSASLGFTDRSSRGILDTIEMIEKYRLDIRTVTMGISLLECARGSMEETATAVYDRVTSQAARLVEVCEGIERELGI PIVNKRISVTPIALVTAGCSGDPVDVARALDKAAKDVGVNFIGGYSALVEKGGTTSDIRLIRSIPEALSTTDVVCGSVNV ASSRAGINMNAVNEMGKVVKQAAELTKDRSAIACAKLVVFANSVGDNPFMAGAFHGIEEPDCVVSVGVSGPGVVSRALGN LQGATLDQVAEEIKKAAFKITRTGQLVGAMASERLGVPFGIVDLSLAPTAEVGDSVANILEVMGLDQVGTHGTTAALALL NDAVKKGGMMACSRVGGLSGSFIPVSEDKGMIDAVRTGAISIDKLEAMTAICSVGLDMIAIPGDTPAETISGMIADEAAI GVMNHKTTAVRVIPVPGTVPGDEVDFGGLLGYAPVIPVNTVGNSEFIHRGGFIPAPVHGFRN
Specific function: Unknown
COG id: COG2848
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0210 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1545_CORGL (Q8NQ93)
Other databases:
- EMBL: BA000036 - EMBL: BX927152 - RefSeq: NP_600761.1 - RefSeq: YP_225830.1 - ProteinModelPortal: Q8NQ93 - SMR: Q8NQ93 - GeneID: 1019517 - GeneID: 3345146 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg1743 - KEGG: cgl:NCgl1487 - HOGENOM: HBG296656 - OMA: CGTHGTT - ProtClustDB: PRK05313 - BioCyc: CGLU196627:CG1743-MONOMER - HAMAP: MF_01221 - InterPro: IPR007841
Pfam domain/function: PF05167 DUF711
EC number: NA
Molecular weight: Translated: 47719; Mature: 47719
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDFSASLGFTDRSSRGILDTIEMIEKYRLDIRTVTMGISLLECARGSMEETATAVYDRV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TSQAARLVEVCEGIERELGIPIVNKRISVTPIALVTAGCSGDPVDVARALDKAAKDVGVN HHHHHHHHHHHHHHHHHCCCCEECCEEEECEEEEEEECCCCCHHHHHHHHHHHHHHCCCE FIGGYSALVEKGGTTSDIRLIRSIPEALSTTDVVCGSVNVASSRAGINMNAVNEMGKVVK EECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHH QAAELTKDRSAIACAKLVVFANSVGDNPFMAGAFHGIEEPDCVVSVGVSGPGVVSRALGN HHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCCEEEEECCCCCHHHHHHHHC LQGATLDQVAEEIKKAAFKITRTGQLVGAMASERLGVPFGIVDLSLAPTAEVGDSVANIL CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH EVMGLDQVGTHGTTAALALLNDAVKKGGMMACSRVGGLSGSFIPVSEDKGMIDAVRTGAI HHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCC SIDKLEAMTAICSVGLDMIAIPGDTPAETISGMIADEAAIGVMNHKTTAVRVIPVPGTVP CHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCC GDEVDFGGLLGYAPVIPVNTVGNSEFIHRGGFIPAPVHGFRN CCCCCCCCHHCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDDFSASLGFTDRSSRGILDTIEMIEKYRLDIRTVTMGISLLECARGSMEETATAVYDRV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TSQAARLVEVCEGIERELGIPIVNKRISVTPIALVTAGCSGDPVDVARALDKAAKDVGVN HHHHHHHHHHHHHHHHHCCCCEECCEEEECEEEEEEECCCCCHHHHHHHHHHHHHHCCCE FIGGYSALVEKGGTTSDIRLIRSIPEALSTTDVVCGSVNVASSRAGINMNAVNEMGKVVK EECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHH QAAELTKDRSAIACAKLVVFANSVGDNPFMAGAFHGIEEPDCVVSVGVSGPGVVSRALGN HHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCCEEEEECCCCCHHHHHHHHC LQGATLDQVAEEIKKAAFKITRTGQLVGAMASERLGVPFGIVDLSLAPTAEVGDSVANIL CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH EVMGLDQVGTHGTTAALALLNDAVKKGGMMACSRVGGLSGSFIPVSEDKGMIDAVRTGAI HHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCC SIDKLEAMTAICSVGLDMIAIPGDTPAETISGMIADEAAIGVMNHKTTAVRVIPVPGTVP CHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCC GDEVDFGGLLGYAPVIPVNTVGNSEFIHRGGFIPAPVHGFRN CCCCCCCCHHCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626