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The map label for this gene is ybbK [C]

Identifier: 62390415

GI number: 62390415

Start: 1619785

End: 1621083

Strand: Reverse

Name: ybbK [C]

Synonym: cg1730

Alternate gene names: 62390415

Gene position: 1621083-1619785 (Counterclockwise)

Preceding gene: 62390416

Following gene: 62390412

Centisome position: 49.38

GC content: 55.35

Gene sequence:

>1299_bases
ATGACAGGACTAATCCTCGCCATAGTTTTCCTGGTCTTTGTCGCCGTCGTGGTGATCAAGTCCATAGCCCTGATTCCCCA
GGGTGAAGCCGCCGTCATTGAACGCCTTGGTAGCTACACCCGCACCGTTTCAGGTGGCCTGACCCTGCTGGTTCCATTCG
TGGACCGAGTACGCGCAAGGATCGACACCCGTGAGCGCGTGGTCTCATTCCCACCGCAGGCTGTTATTACCCAAGACAAC
CTGACCGTGGCCATCGATATCGTGGTGACCTTCCAAATCAACGAACCAGAGCGCGCCATCTACGGCGTGGACAACTACAT
CGTCGGTGTGGAGCAGATTTCTGTAGCAACACTTCGAGACGTTGTCGGTGGCATGACCCTGGAAGAAACCCTCACTTCAC
GTGACGTGATCAACCGCCGCCTCCGTGGCGAGCTCGATGCAGCAACCACCAAATGGGGCCTGCGCATCAGCCGTGTGGAA
CTAAAGGCAATTGATCCGCCACCATCCATCCAGCAATCGATGGAAAAGCAGATGAAGGCAGACCGTGAAAAGCGCGCCAC
CATTTTGACCGCAGAAGGTCAGCGCGAAGCCGACATCAAAACTGCCGAAGGTGAAAAGCAAGCCAAGATCCTCCAAGCTG
AGGGTGAAAAGCACGCATCCATCCTGAACGCAGAAGCAGAACGCCAAGCGATGATCCTGCGCGCCGAAGGTGAACGCGCA
GCACGCTACCTCCAGGCGCAGGGTGAAGCCCGAGCAATCCAAAAGGTCAACGCAGCAATCAAGTCTGCCAAGTTGACCCC
AGAGGTTCTTGCTTATCAATACCTCGAAAAGCTTCCTAAGATCGCAGAGGGCAACGCCTCCAAGATGTGGGTCATCCCAA
GCCAGTTCTCCGATTCTCTGGAAGGTTTTGCGAAGCAGTTCGGCGCAAAGGATGCAGAAGGTGTCTTCCGCTACGAACCA
AACACCGTGGATGAAGAAACCCGCGACATCGCAAACGCCGACAACGTGGAAGACTGGTTCTCCACCGAATCAGACCCTGA
AATCGCAGCAGCAGTCGCCGCAGCAAACGCCGTGGCCAACAAGCCAGTCGATCCAGAACCCGGTGAGATCCTTTCCAAGA
AGACCGCACGACGCGTTGAACCTGAAGCAGTATTGGAGGCTTTGCAAAACGGAACCACTACACAACCTGAGGTTGAGGCA
GCACCTCCTACCGCAAACTTCGCCCAAGAATTCCCTGCACCACAGGCAAACCCTGAAGATTACTCCGACCAACACCGAGA
GAATCCTTACGGAAACTAA

Upstream 100 bases:

>100_bases
GTCATTGATATCCAAGGCACGACCGCGATTGTATGGAAAGAAGCCTAAATTTTTAACAATCAAATAGTACTGGCCATTCC
CAACTAAAACTGGAGTAACG

Downstream 100 bases:

>100_bases
TCAGGCATAAGAAAAGGCGGGAAACACTAGATGTTTCCCGCCTTATTTGTGTCTAAACAACCATGTTGATGAAGAACAGG
CCTAAAATCCCGCTCGTTCG

Product: protease subunit, stomatin/prohibitin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MTGLILAIVFLVFVAVVVIKSIALIPQGEAAVIERLGSYTRTVSGGLTLLVPFVDRVRARIDTRERVVSFPPQAVITQDN
LTVAIDIVVTFQINEPERAIYGVDNYIVGVEQISVATLRDVVGGMTLEETLTSRDVINRRLRGELDAATTKWGLRISRVE
LKAIDPPPSIQQSMEKQMKADREKRATILTAEGQREADIKTAEGEKQAKILQAEGEKHASILNAEAERQAMILRAEGERA
ARYLQAQGEARAIQKVNAAIKSAKLTPEVLAYQYLEKLPKIAEGNASKMWVIPSQFSDSLEGFAKQFGAKDAEGVFRYEP
NTVDEETRDIANADNVEDWFSTESDPEIAAAVAAANAVANKPVDPEPGEILSKKTARRVEPEAVLEALQNGTTTQPEVEA
APPTANFAQEFPAPQANPEDYSDQHRENPYGN

Sequences:

>Translated_432_residues
MTGLILAIVFLVFVAVVVIKSIALIPQGEAAVIERLGSYTRTVSGGLTLLVPFVDRVRARIDTRERVVSFPPQAVITQDN
LTVAIDIVVTFQINEPERAIYGVDNYIVGVEQISVATLRDVVGGMTLEETLTSRDVINRRLRGELDAATTKWGLRISRVE
LKAIDPPPSIQQSMEKQMKADREKRATILTAEGQREADIKTAEGEKQAKILQAEGEKHASILNAEAERQAMILRAEGERA
ARYLQAQGEARAIQKVNAAIKSAKLTPEVLAYQYLEKLPKIAEGNASKMWVIPSQFSDSLEGFAKQFGAKDAEGVFRYEP
NTVDEETRDIANADNVEDWFSTESDPEIAAAVAAANAVANKPVDPEPGEILSKKTARRVEPEAVLEALQNGTTTQPEVEA
APPTANFAQEFPAPQANPEDYSDQHRENPYGN
>Mature_431_residues
TGLILAIVFLVFVAVVVIKSIALIPQGEAAVIERLGSYTRTVSGGLTLLVPFVDRVRARIDTRERVVSFPPQAVITQDNL
TVAIDIVVTFQINEPERAIYGVDNYIVGVEQISVATLRDVVGGMTLEETLTSRDVINRRLRGELDAATTKWGLRISRVEL
KAIDPPPSIQQSMEKQMKADREKRATILTAEGQREADIKTAEGEKQAKILQAEGEKHASILNAEAERQAMILRAEGERAA
RYLQAQGEARAIQKVNAAIKSAKLTPEVLAYQYLEKLPKIAEGNASKMWVIPSQFSDSLEGFAKQFGAKDAEGVFRYEPN
TVDEETRDIANADNVEDWFSTESDPEIAAAVAAANAVANKPVDPEPGEILSKKTARRVEPEAVLEALQNGTTTQPEVEAA
PPTANFAQEFPAPQANPEDYSDQHRENPYGN

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=206, Percent_Identity=38.8349514563107, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI21686995, Length=216, Percent_Identity=31.4814814814815, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI221316744, Length=216, Percent_Identity=31.4814814814815, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI38016911, Length=205, Percent_Identity=30.2439024390244, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI7657615, Length=191, Percent_Identity=21.9895287958115, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI1786697, Length=308, Percent_Identity=38.6363636363636, Blast_Score=213, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI32564147, Length=285, Percent_Identity=33.6842105263158, Blast_Score=152, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI193209764, Length=229, Percent_Identity=31.0043668122271, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17569493, Length=229, Percent_Identity=31.0043668122271, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI25153583, Length=208, Percent_Identity=34.1346153846154, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI71987612, Length=208, Percent_Identity=34.1346153846154, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71987621, Length=207, Percent_Identity=32.8502415458937, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI193210507, Length=231, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17570161, Length=231, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17569497, Length=202, Percent_Identity=29.2079207920792, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17569499, Length=208, Percent_Identity=32.2115384615385, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17570459, Length=213, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71989948, Length=192, Percent_Identity=32.8125, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71989955, Length=192, Percent_Identity=32.8125, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32566490, Length=202, Percent_Identity=29.7029702970297, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45550506, Length=327, Percent_Identity=31.4984709480122, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI281361633, Length=238, Percent_Identity=31.0924369747899, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281361631, Length=238, Percent_Identity=31.0924369747899, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI21356845, Length=239, Percent_Identity=30.9623430962343, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI18860517, Length=206, Percent_Identity=31.0679611650485, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI45556022, Length=204, Percent_Identity=34.3137254901961, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24657857, Length=199, Percent_Identity=33.6683417085427, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI281365664, Length=199, Percent_Identity=33.6683417085427, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI62484448, Length=199, Percent_Identity=33.6683417085427, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI62484274, Length=199, Percent_Identity=33.6683417085427, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28573263, Length=199, Percent_Identity=30.6532663316583, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281361635, Length=176, Percent_Identity=33.5227272727273, Blast_Score=92, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 47316; Mature: 47185

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLILAIVFLVFVAVVVIKSIALIPQGEAAVIERLGSYTRTVSGGLTLLVPFVDRVRAR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDTRERVVSFPPQAVITQDNLTVAIDIVVTFQINEPERAIYGVDNYIVGVEQISVATLRD
HHHHHHHHCCCCCEEEECCCCEEEEEEEEEEEECCCCHHEECCCHHEEEHHHHHHHHHHH
VVGGMTLEETLTSRDVINRRLRGELDAATTKWGLRISRVELKAIDPPPSIQQSMEKQMKA
HHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHH
DREKRATILTAEGQREADIKTAEGEKQAKILQAEGEKHASILNAEAERQAMILRAEGERA
HHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHCEEEEEECCHHH
ARYLQAQGEARAIQKVNAAIKSAKLTPEVLAYQYLEKLPKIAEGNASKMWVIPSQFSDSL
HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCCCEEEEEHHHHHHHH
EGFAKQFGAKDAEGVFRYEPNTVDEETRDIANADNVEDWFSTESDPEIAAAVAAANAVAN
HHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHC
KPVDPEPGEILSKKTARRVEPEAVLEALQNGTTTQPEVEAAPPTANFAQEFPAPQANPED
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
YSDQHRENPYGN
CCHHHCCCCCCC
>Mature Secondary Structure 
TGLILAIVFLVFVAVVVIKSIALIPQGEAAVIERLGSYTRTVSGGLTLLVPFVDRVRAR
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDTRERVVSFPPQAVITQDNLTVAIDIVVTFQINEPERAIYGVDNYIVGVEQISVATLRD
HHHHHHHHCCCCCEEEECCCCEEEEEEEEEEEECCCCHHEECCCHHEEEHHHHHHHHHHH
VVGGMTLEETLTSRDVINRRLRGELDAATTKWGLRISRVELKAIDPPPSIQQSMEKQMKA
HHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHH
DREKRATILTAEGQREADIKTAEGEKQAKILQAEGEKHASILNAEAERQAMILRAEGERA
HHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHCEEEEEECCHHH
ARYLQAQGEARAIQKVNAAIKSAKLTPEVLAYQYLEKLPKIAEGNASKMWVIPSQFSDSL
HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCCCEEEEEHHHHHHHH
EGFAKQFGAKDAEGVFRYEPNTVDEETRDIANADNVEDWFSTESDPEIAAAVAAANAVAN
HHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHC
KPVDPEPGEILSKKTARRVEPEAVLEALQNGTTTQPEVEAAPPTANFAQEFPAPQANPED
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
YSDQHRENPYGN
CCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]