Click here to switch to the map view.

The map label for this gene is ydjZ [C]

Identifier: 62390413

GI number: 62390413

Start: 1617994

End: 1618770

Strand: Direct

Name: ydjZ [C]

Synonym: cg1727

Alternate gene names: 62390413

Gene position: 1617994-1618770 (Clockwise)

Preceding gene: 62390409

Following gene: 62390414

Centisome position: 49.29

GC content: 50.32

Gene sequence:

>777_bases
ATGGTGTTTTCTATGCATGACAAAGGTGAGACCCAGGAGAATCCTGCGGACATGTCAGGACGCCTAAACACACCAATTTC
CACGGTCTTTCACTTCTTTAGCTCACTTTTCCATGACGCTCTGCGCAGTGTTGCCCAGTGGAGTGCGTGGAAGAAAATCG
CTGTATCGGTTGTCATCGTCGCAATTATTTCCGTAACTTTTCTTGTCGATGTCCCCCCGATTTCGGTTTATCGTGACTGG
GCAAACAACGCCGGCGACGCTTTTGTCTTAGTTTTTTGCGCCTTTTATATCCTCATTACTCAGTTCCCTATCCCCCGCAC
AGTTCTCACACTGGCCTCCGGCGTGCTGTTCGGGCCGGTTCTTGGATCAGTCGTGGCGCTGGGTTCCACCACAGTGTCAG
CGGTAATCTCGCTCCTCATTGTTCGGGGTCTGCTTGGCGATTGGATGGCGCCACGTTTAACGCACCCCGCAGTCTCACGC
ATCAATACCCGACTTGAGCAACGTGGATGGCTGGCGATTACCTCTTTAAGAATGATCGCCGCTATCCCCTTTTCCATCCT
CAACTATGTTGCAGCCTTGACTAGCGTTCCTGTTTTTTCTTTTGCCATCGCTACCTTGATCGGATCTGCACCAGGAACCA
TCGTCACCGTCGTTTTGGGAGATGCAGTCACAGGTTCTGGAAACTGGACTGCCGTTGCATTCACGGTATTTTTAGCGATT
TTGGGTGTTTTAGGTATCTTTTTAGATCAAAAGATGCCAGTCAAGCCTGGAAAGTAG

Upstream 100 bases:

>100_bases
AGCTGAGCAGGGATCGGCACTAGCTTCTACTACGATAACGAGAACTTTGTTTCAATACATTCAAAATGGCGGAATATTTT
GATCACGGGGGTGCAACTGT

Downstream 100 bases:

>100_bases
ACAATATAAGGTAGGGTTGGAGAAGATTCTTTACTTCTTCACTCATTCGCCCTGACAGCGAATCCACTACAATAAACAAA
GGGGGCAGCCACCCATGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MVFSMHDKGETQENPADMSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIVAIISVTFLVDVPPISVYRDW
ANNAGDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPVLGSVVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSR
INTRLEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIVTVVLGDAVTGSGNWTAVAFTVFLAI
LGVLGIFLDQKMPVKPGK

Sequences:

>Translated_258_residues
MVFSMHDKGETQENPADMSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIVAIISVTFLVDVPPISVYRDW
ANNAGDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPVLGSVVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSR
INTRLEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIVTVVLGDAVTGSGNWTAVAFTVFLAI
LGVLGIFLDQKMPVKPGK
>Mature_258_residues
MVFSMHDKGETQENPADMSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIVAIISVTFLVDVPPISVYRDW
ANNAGDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPVLGSVVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSR
INTRLEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIVTVVLGDAVTGSGNWTAVAFTVFLAI
LGVLGIFLDQKMPVKPGK

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 27605; Mature: 27605

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS01159 WW_DOMAIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSMHDKGETQENPADMSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIV
CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIISVTFLVDVPPISVYRDWANNAGDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPV
HHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGSVVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSRINTRLEQRGWLAITSLRMIA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
AIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIVTVVLGDAVTGSGNWTAVAFTVFLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHH
LGVLGIFLDQKMPVKPGK
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVFSMHDKGETQENPADMSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIV
CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIISVTFLVDVPPISVYRDWANNAGDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPV
HHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGSVVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSRINTRLEQRGWLAITSLRMIA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
AIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIVTVVLGDAVTGSGNWTAVAFTVFLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHH
LGVLGIFLDQKMPVKPGK
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]