| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yebN [C]
Identifier: 62390352
GI number: 62390352
Start: 1550247
End: 1550819
Strand: Direct
Name: yebN [C]
Synonym: cg1660
Alternate gene names: 62390352
Gene position: 1550247-1550819 (Clockwise)
Preceding gene: 62390349
Following gene: 62390353
Centisome position: 47.22
GC content: 51.83
Gene sequence:
>573_bases ATGCCCTTTCTACAAATCTCTCTGCTTTCCATCGGTGTCGCCGCCGATGCGTTTGCTTGTTCCGTTGTCCGCGGCACCGC CATTCAAGTCAACCTTTTCAAACGCGCACTTGTTCTCGCGGGCATCTTTGGTGTCTTCCAAGCGGCAATGCCTTTAATCG GCTGGTTCATTGGCCGTTTCTTTGCTGGAATCACCTTCATCGCTGAAATTGATCACTGGATCGCTTTTGCACTATTGGGT ATTGTCGGCACCAAAATGATCTGGGATGCCTTCCAACCTGAAGATGATGAAACCATTGTCGATGACGGCCGCGTTCAATT TAGACCAGCAATTATCCTGGGGCTAGCCACCAGCATTGACGCATTAGCCGTAGGCATGGGCCTGGCATTCGTGGAAGTTT CCATCCTCAAAGTGGCACTGTCCATGGGCAGCATCACCTTCGCACTTTCGCTTGCTGGCGCCTGGATCGGACACCATGGT GGAGGAAAGTTTGGCAAGTGGGCTACGATTCTTGGCGGAATAATCTTGATCGGAATCGGCGCAAACATCGTCTACGAACA CCTCAGCGCGTAA
Upstream 100 bases:
>100_bases CTTAAAAAGGGGCTTTATCGGTTCAGGCGAGCGAGACCTTCGGCGTTCACACTTCGCCGGGGTCTATTTTTTATGCCCAG GCACGGCTCATAGGAGAACC
Downstream 100 bases:
>100_bases CCCTCGGCGCATTATCCTCAGACAGCTTTTAGCGCAAACAAGGAGCATCATTGAAACGGGTCGTTGAAGCGTGGGATAGA TTTCAAATCCCACTGTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPFLQISLLSIGVAADAFACSVVRGTAIQVNLFKRALVLAGIFGVFQAAMPLIGWFIGRFFAGITFIAEIDHWIAFALLG IVGTKMIWDAFQPEDDETIVDDGRVQFRPAIILGLATSIDALAVGMGLAFVEVSILKVALSMGSITFALSLAGAWIGHHG GGKFGKWATILGGIILIGIGANIVYEHLSA
Sequences:
>Translated_190_residues MPFLQISLLSIGVAADAFACSVVRGTAIQVNLFKRALVLAGIFGVFQAAMPLIGWFIGRFFAGITFIAEIDHWIAFALLG IVGTKMIWDAFQPEDDETIVDDGRVQFRPAIILGLATSIDALAVGMGLAFVEVSILKVALSMGSITFALSLAGAWIGHHG GGKFGKWATILGGIILIGIGANIVYEHLSA >Mature_189_residues PFLQISLLSIGVAADAFACSVVRGTAIQVNLFKRALVLAGIFGVFQAAMPLIGWFIGRFFAGITFIAEIDHWIAFALLGI VGTKMIWDAFQPEDDETIVDDGRVQFRPAIILGLATSIDALAVGMGLAFVEVSILKVALSMGSITFALSLAGAWIGHHGG GKFGKWATILGGIILIGIGANIVYEHLSA
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0059 family
Homologues:
Organism=Escherichia coli, GI87081981, Length=180, Percent_Identity=41.6666666666667, Blast_Score=124, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1469_CORGL (Q8NQG6)
Other databases:
- EMBL: BA000036 - EMBL: BX927152 - RefSeq: NP_600686.1 - RefSeq: YP_225754.1 - GeneID: 1019443 - GeneID: 3343912 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg1660 - KEGG: cgl:NCgl1413 - HOGENOM: HBG709685 - OMA: WDHWVAF - PhylomeDB: Q8NQG6 - ProtClustDB: CLSK633424 - BioCyc: CGLU196627:CG1660-MONOMER - HAMAP: MF_01521 - InterPro: IPR003810 - InterPro: IPR022929
Pfam domain/function: PF02659 DUF204
EC number: NA
Molecular weight: Translated: 20062; Mature: 19931
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12f60e88)-; HASH(0x13681d20)-; HASH(0x13321080)-; HASH(0x127cf2b4)-; HASH(0x13b21794)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLQISLLSIGVAADAFACSVVRGTAIQVNLFKRALVLAGIFGVFQAAMPLIGWFIGRF CCCEEEHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGITFIAEIDHWIAFALLGIVGTKMIWDAFQPEDDETIVDDGRVQFRPAIILGLATSID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEHHHEEHHHHHHH ALAVGMGLAFVEVSILKVALSMGSITFALSLAGAWIGHHGGGKFGKWATILGGIILIGIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC ANIVYEHLSA HHHHHHHHCH >Mature Secondary Structure PFLQISLLSIGVAADAFACSVVRGTAIQVNLFKRALVLAGIFGVFQAAMPLIGWFIGRF CCEEEHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGITFIAEIDHWIAFALLGIVGTKMIWDAFQPEDDETIVDDGRVQFRPAIILGLATSID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEHHHEEHHHHHHH ALAVGMGLAFVEVSILKVALSMGSITFALSLAGAWIGHHGGGKFGKWATILGGIILIGIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC ANIVYEHLSA HHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12948626