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The map label for this gene is ugpB [H]

Identifier: 62390270

GI number: 62390270

Start: 1454225

End: 1455541

Strand: Direct

Name: ugpB [H]

Synonym: cg1570

Alternate gene names: 62390270

Gene position: 1454225-1455541 (Clockwise)

Preceding gene: 62390269

Following gene: 62390271

Centisome position: 44.3

GC content: 56.26

Gene sequence:

>1317_bases
ATGGCTCAGATTTCTCGTCGTCACTTCCTGGCTGCAGCAACTGTTGCAGGCGCAGGCGCAACTTTGGCAGCATGTGCGGG
TACCGGTGGAAGCACTTCTTCCTCCAGCGATTCTGGTTCAGAGAGTGACACCAACACCATCGTTTGGTGGTCTAACCACC
CAGCGAACTCCAAGGACGTTGAGCTGGAGCTGATTTCCCGCTTCGAGGCTGAAAACCCAGATCTGAAGGTTCAGCTGGTT
GATGCTGGAGCTAACTACGCTGAGGTTTCCCAGAAGTTCAATGCCGCTCTTTCTGGCGGCGACCTTCCTGACCTCGTGGT
TCTTTCTGACACCGAGTGGTTTAACTTCGCCATCAACGGCGCAACCGTGAACATCGATGAGGTTGCAAAGCGCAACAACA
TCGACACCTCCACCTACGTTGACTCCCTGTTCAATGACTACTCACACGAGGGTGGCCACTATGGTTTGCCTTTCGCTCGC
TCCACTGTCCTCTTCTACTACAACAAGGATCTGTGGGCTAAGGCTGGCCTGGAAGATCGTGGCCCAGAGTCATGGGAAGA
GTTCTCCGAGTGGGGTCCAAAGCTGCAGGAAGCGATGGACAGTGGTTTCGCACACGGTTGGGGAGATGCAACCAACTACC
TTTCTTGGACTTTCGAAGGCCCAATGTGGTCCCTCGGCGGCAACTACTCTGAAGGTTGGGAGTCCCGTCTGACTACCCCA
GAGACCATCCGTGCAGTTGAGTGGCTCAAGTCCACCGTTGATGAAGGTTTCGCAACCGTCTCCACCGACGTCACCAACGA
GTTCGCAACCGGCCTGATCGGTTCATGCATCCAGTCCACCGGTGATCTGTCTTCGGTTGCCGGCGCTGCAAGCTTCGACT
GGGGCGTAGCAGCACTTCCTAACCCAACCGGCGAGGGCGCTTGCCCAACCGGTGGCGCAGGCCTGGGAATCCCATCTGGC
ATCTCTGAGCAGCGTCAGGACAACGCCCTGAAGTTCATCGACTTCCTCACCAACGCCGCGAACACTGGCTACTGGTCCCG
CGAGACCGGTTATGTTCCAGTTCGTAAGGATGCTGCATCTGATCCAGATCACGCAGCATTCCTCGAGGAGAACCCTGCAT
ACAACGTTGCAGTGGAGCAGCTTCCTGATACCCGTTCCCAGGACAACTTCCGCGTGCTGCTGCCAAACGGTGACCGCACC
ATCGGTGACGCACTGGAGAAGATCTGCCTGACTGGTGCAGACATCGATGTCACCCTGGCTGAGGTTGAGACCAAGCTGAA
CACCATCTACACCCGCGACATCGAACCACTTATTTAA

Upstream 100 bases:

>100_bases
AACTTCTCGCTAAAAACTTCTCGCTAAAGGCTTCTCCTAGAAGCTTCTCCATGGGTTAACACAACCCATATCCCTCCCAC
TACATATATAAGGACTGAAA

Downstream 100 bases:

>100_bases
TCCGAGCACTTCAGCTACACCTATTTAAGGAGGCTGTGACATGGCGTCAATCGTCTTTGAAAACGTCACACGCAAATACT
CTCCGGGCGCACGCCCGGCC

Product: sn-glycerol-3-phosphate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MAQISRRHFLAAATVAGAGATLAACAGTGGSTSSSSDSGSESDTNTIVWWSNHPANSKDVELELISRFEAENPDLKVQLV
DAGANYAEVSQKFNAALSGGDLPDLVVLSDTEWFNFAINGATVNIDEVAKRNNIDTSTYVDSLFNDYSHEGGHYGLPFAR
STVLFYYNKDLWAKAGLEDRGPESWEEFSEWGPKLQEAMDSGFAHGWGDATNYLSWTFEGPMWSLGGNYSEGWESRLTTP
ETIRAVEWLKSTVDEGFATVSTDVTNEFATGLIGSCIQSTGDLSSVAGAASFDWGVAALPNPTGEGACPTGGAGLGIPSG
ISEQRQDNALKFIDFLTNAANTGYWSRETGYVPVRKDAASDPDHAAFLEENPAYNVAVEQLPDTRSQDNFRVLLPNGDRT
IGDALEKICLTGADIDVTLAEVETKLNTIYTRDIEPLI

Sequences:

>Translated_438_residues
MAQISRRHFLAAATVAGAGATLAACAGTGGSTSSSSDSGSESDTNTIVWWSNHPANSKDVELELISRFEAENPDLKVQLV
DAGANYAEVSQKFNAALSGGDLPDLVVLSDTEWFNFAINGATVNIDEVAKRNNIDTSTYVDSLFNDYSHEGGHYGLPFAR
STVLFYYNKDLWAKAGLEDRGPESWEEFSEWGPKLQEAMDSGFAHGWGDATNYLSWTFEGPMWSLGGNYSEGWESRLTTP
ETIRAVEWLKSTVDEGFATVSTDVTNEFATGLIGSCIQSTGDLSSVAGAASFDWGVAALPNPTGEGACPTGGAGLGIPSG
ISEQRQDNALKFIDFLTNAANTGYWSRETGYVPVRKDAASDPDHAAFLEENPAYNVAVEQLPDTRSQDNFRVLLPNGDRT
IGDALEKICLTGADIDVTLAEVETKLNTIYTRDIEPLI
>Mature_437_residues
AQISRRHFLAAATVAGAGATLAACAGTGGSTSSSSDSGSESDTNTIVWWSNHPANSKDVELELISRFEAENPDLKVQLVD
AGANYAEVSQKFNAALSGGDLPDLVVLSDTEWFNFAINGATVNIDEVAKRNNIDTSTYVDSLFNDYSHEGGHYGLPFARS
TVLFYYNKDLWAKAGLEDRGPESWEEFSEWGPKLQEAMDSGFAHGWGDATNYLSWTFEGPMWSLGGNYSEGWESRLTTPE
TIRAVEWLKSTVDEGFATVSTDVTNEFATGLIGSCIQSTGDLSSVAGAASFDWGVAALPNPTGEGACPTGGAGLGIPSGI
SEQRQDNALKFIDFLTNAANTGYWSRETGYVPVRKDAASDPDHAAFLEENPAYNVAVEQLPDTRSQDNFRVLLPNGDRTI
GDALEKICLTGADIDVTLAEVETKLNTIYTRDIEPLI

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=362, Percent_Identity=28.4530386740331, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47098; Mature: 46966

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQISRRHFLAAATVAGAGATLAACAGTGGSTSSSSDSGSESDTNTIVWWSNHPANSKDV
CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
ELELISRFEAENPDLKVQLVDAGANYAEVSQKFNAALSGGDLPDLVVLSDTEWFNFAING
HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECC
ATVNIDEVAKRNNIDTSTYVDSLFNDYSHEGGHYGLPFARSTVLFYYNKDLWAKAGLEDR
CEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHCEEEEEEECCCHHHHCCCCCC
GPESWEEFSEWGPKLQEAMDSGFAHGWGDATNYLSWTFEGPMWSLGGNYSEGWESRLTTP
CCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCHHHCCCCH
ETIRAVEWLKSTVDEGFATVSTDVTNEFATGLIGSCIQSTGDLSSVAGAASFDWGVAALP
HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEECC
NPTGEGACPTGGAGLGIPSGISEQRQDNALKFIDFLTNAANTGYWSRETGYVPVRKDAAS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC
DPDHAAFLEENPAYNVAVEQLPDTRSQDNFRVLLPNGDRTIGDALEKICLTGADIDVTLA
CCCCEEEECCCCCCEEEHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEHH
EVETKLNTIYTRDIEPLI
HHHHHHHHEEECCCCCCC
>Mature Secondary Structure 
AQISRRHFLAAATVAGAGATLAACAGTGGSTSSSSDSGSESDTNTIVWWSNHPANSKDV
CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
ELELISRFEAENPDLKVQLVDAGANYAEVSQKFNAALSGGDLPDLVVLSDTEWFNFAING
HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECC
ATVNIDEVAKRNNIDTSTYVDSLFNDYSHEGGHYGLPFARSTVLFYYNKDLWAKAGLEDR
CEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHCEEEEEEECCCHHHHCCCCCC
GPESWEEFSEWGPKLQEAMDSGFAHGWGDATNYLSWTFEGPMWSLGGNYSEGWESRLTTP
CCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCHHHCCCCH
ETIRAVEWLKSTVDEGFATVSTDVTNEFATGLIGSCIQSTGDLSSVAGAASFDWGVAALP
HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEECC
NPTGEGACPTGGAGLGIPSGISEQRQDNALKFIDFLTNAANTGYWSRETGYVPVRKDAAS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC
DPDHAAFLEENPAYNVAVEQLPDTRSQDNFRVLLPNGDRTIGDALEKICLTGADIDVTLA
CCCCEEEECCCCCCEEEHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEHH
EVETKLNTIYTRDIEPLI
HHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]