| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is gltX [H]
Identifier: 62390179
GI number: 62390179
Start: 1362828
End: 1364318
Strand: Direct
Name: gltX [H]
Synonym: cg1463
Alternate gene names: 62390179
Gene position: 1362828-1364318 (Clockwise)
Preceding gene: 62390177
Following gene: 62390186
Centisome position: 41.52
GC content: 56.67
Gene sequence:
>1491_bases ATGGCCTGCATGACTGATGTTCGTGTTCGTTTCTGCCCATCGCCCACCGGCACCCCACACGTTGGACTTGTGCGCACCGC GCTGTTCAACTGGGCATATGCTCGCCACACTGGAGGCAAGTTAGTTTTCCGCATTGAGGACACTGACGCTGCCCGCGATT CCGAGGAGTCTTACTCCGCCATCATCGATTCCCTGCGCTGGTTGGGAATGGACTGGGATGAGGGTGTGGAAAAGGGCGGC CCGCATGAGCCCTACCGCCAGTCGCAGCGCAAGGACATCTATCAGGATGTGTTGAAGCAGCTTATCGACGCCGGTGAAGT CTACCCAGCTTATTCCACCGCGGAAGAGGTTGAGGAGCGACACAAGGCTGCTGGCCGCGATCCAAAGCTCGGCTACGACA ACTTTGACCGTGATCTCACCGAAGAGCAGGTCGCAGCATTTGAGGCTGAGGGGCGTAAGCCTGTGTGGCGTCTGCGCATG CCAGAGCAGGATTGGAAGTGGACTGACCTGGTCCGCGGTGAAGTTGAGTTCAAGTCGTTCACCCAGCCTGACTTCGTGGT TGCTCGTTCCAACGGTGAGCCTTTGTACACCCTGGTCAACCCTGTTGATGATGCGTTGATGGAAGTCACCCATGTGCTGC GTGGTGAGGATCTTTTGCCATCGACTCCTCGTCAGCTTGCTCTGTATGAGGCGCTCAAGCGCATTGGCGTGGCAAAGGCC ACCCCAGCCTTTGGTCACCTGCCATTTGTGATGGGTGAGGGCAACAAGAAGCTGTCTAAGCGTGATCCACAGTCCAGCCT GTTCAACCACCGTGACAACGGCATCATCCCAGAGGGCATGCTCAACTACCTGGCGCTGCTGGGTTGGTCACTGTCTGCTG ATCAGGACATTTTCGGTGTCGATGAGTTGATCGCTAACTTTGATGTCGCTGACGTGTTGGGCAACCCAGCTCGCTTTGAC CAGAAGAAGCTTGAGGCCATCAACGCGGATCACATCCGACTTCTGGAGCCTAAGGATTTCGAGGCTCGCCTGCGCGCGTA CATGACTGAGTACACCGAGTTCCCAGCGGATTACCCAGCTGAGAAGTTTGCCATTGCTGCGGAGCTGGTTCAGACCCGCA TCAAGGTGCTCAGCGAGGCGTGGGATCTGCTGAAGTTCCTGGTCACCGCTGACGAAGATCTGGTGTTCAATGAGAAGGCT GCCAAGAAGAACCTCAAGGAGACCGCTGTTGAGCCTCTCAACGCCGGTATCGCAGCGCTGGAGGCAGTGGAGGAGTGGAC CACTCCAAACATTGAAGCAGCATTGAACAAGGCTCTCATTGAGGATCTAGGCCTGAAGCCTCGCGTGGCGTTCGGTGCGT TGCGCATTGGTATCTCCGGCGAGGCTGTATCCCCACCACTGTTTGAGTCCATGGAGCTTTTGGGCAAGGAATCCACGTTG GTTCGTCTGAAGGTTACTCGTGAGCAGACCCCATTCGTGGTCGCTGAGTAA
Upstream 100 bases:
>100_bases GTGTTGGGGGCAGAGGGGTTGCGGTGGGCAGACATGGTTAGCCATTCTAATCCCAGTAGAACTGGGGTAAACGCGCGGGC GGTGGGTGCGGGCTATTAAC
Downstream 100 bases:
>100_bases AACCTGTAGATGAACAAAAGCCCGTCTCCGTTCAGAATTTCTGAGGGAGGTGGGCTCTTTGCGTTTCGGGTTTAGTTGTG GAGGGAGGCGTCGTAACGCA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSAIIDSLRWLGMDWDEGVEKGG PHEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEERHKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRM PEQDWKWTDLVRGEVEFKSFTQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKA TPAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGVDELIANFDVADVLGNPARFD QKKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPAEKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVFNEKA AKKNLKETAVEPLNAGIAALEAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTL VRLKVTREQTPFVVAE
Sequences:
>Translated_496_residues MACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSAIIDSLRWLGMDWDEGVEKGG PHEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEERHKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRM PEQDWKWTDLVRGEVEFKSFTQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKA TPAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGVDELIANFDVADVLGNPARFD QKKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPAEKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVFNEKA AKKNLKETAVEPLNAGIAALEAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTL VRLKVTREQTPFVVAE >Mature_495_residues ACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSAIIDSLRWLGMDWDEGVEKGGP HEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEERHKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRMP EQDWKWTDLVRGEVEFKSFTQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKAT PAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGVDELIANFDVADVLGNPARFDQ KKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPAEKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVFNEKAA KKNLKETAVEPLNAGIAALEAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTLV RLKVTREQTPFVVAE
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=488, Percent_Identity=31.3524590163934, Blast_Score=201, Evalue=1e-51, Organism=Escherichia coli, GI1788743, Length=483, Percent_Identity=34.1614906832298, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI226510925, Length=314, Percent_Identity=28.343949044586, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71993394, Length=500, Percent_Identity=29, Blast_Score=196, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6324540, Length=500, Percent_Identity=30.4, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321192, Length=230, Percent_Identity=27.8260869565217, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24665321, Length=487, Percent_Identity=31.6221765913758, Blast_Score=219, Evalue=3e-57,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 55697; Mature: 55565
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSA CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH IIDSLRWLGMDWDEGVEKGGPHEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEER HHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH HKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRMPEQDWKWTDLVRGEVEFKSF HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHCCCCHHCCC TQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKA CCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC TPAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGV CCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH DELIANFDVADVLGNPARFDQKKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPA HHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCH EKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVFNEKAAKKNLKETAVEPLNAGIAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH EAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTL HHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEE VRLKVTREQTPFVVAE EEEEEECCCCCEEEEC >Mature Secondary Structure ACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSA CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH IIDSLRWLGMDWDEGVEKGGPHEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEER HHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH HKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRMPEQDWKWTDLVRGEVEFKSF HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHCCCCHHCCC TQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKA CCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC TPAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGV CCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH DELIANFDVADVLGNPARFDQKKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPA HHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCH EKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVFNEKAAKKNLKETAVEPLNAGIAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH EAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTL HHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEE VRLKVTREQTPFVVAE EEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA