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The map label for this gene is ybbN [C]

Identifier: 62390107

GI number: 62390107

Start: 1283662

End: 1284585

Strand: Direct

Name: ybbN [C]

Synonym: cg1375

Alternate gene names: 62390107

Gene position: 1283662-1284585 (Clockwise)

Preceding gene: 62390106

Following gene: 62390108

Centisome position: 39.1

GC content: 57.47

Gene sequence:

>924_bases
GTGACGTCCCCGCATAATTTTGTCAGTGGTGCTATTGATCTGGGTGAGGTGAAAGCGCGTGCGGATGCGCGCCAGAAGGC
CCATGAGCAGGGGCCGGTAACTCAGGGCATTGCTAGTTCCCTTGATGTGACCATGGAGAACCTGGAGAATGAGGTGCTGC
GTCGTTCCACGCAGGTTCCGGTGATTGTTCTCGTGGGTACCCCGCGCAGCCCTGATTCGGAGCAGTTGAAGTCGGATCTG
ACCACGCTTGCTGCTGAAAGTGGCAGGAAGTTCATTTTCGGTTATGTCAATGCTGATACCGATGCTGATGTGGCCCAGGT
GTTTGGGGTGCAGGGCTTGCCGTCGGTGATTGCTGTGGCAGCGGGACGCCCTCTGGCTGATTTCCAGGGCGGACAGCCAG
CGGATGCACTAAAGCAGTGGACTGATCAGGTGGTTCAGGCTGTGGGTGGACAGCTGGAAGGACTGCCAGAGGAGGCCACA
GACGGCGAACAAGAAGACGCTCCTGTGGAAGACCCCCGCTTCGATGCTGCCACTGATGCTCTAAACCGTGGCGCTTTCGA
TGAGGCGATTGCGGTTTATGAGTCCATTTTGGCGCAGGAGCCAAACAACGCTGATGCGAAGCAGGCACGCGATACCGCAA
AGCTGTTGGGCCGGCTTGCCACGGTGGATCCTTCGGTGGATGTTGTCGCTGCTGCAGATGCTGATCCAACAAACGTTGAT
CTGGCCTACACAGCAGCTGACGCGGCTGTTGTTGCGGGTGATCCTGAGGCTGCCTTTGATCGTTTAATTGCTCTGCTGAC
CATCAGCGCTGGCGATCAGAAGAATCAGGTGAAGGAACGTTTGCTGGAGCTGTTTGGCATGTTTGAGACCGCCGATCCCC
GTGTGCTGCAGGCGCGAGGAAAGATGGCCAGCGCGCTGTTCTAA

Upstream 100 bases:

>100_bases
CTAGCTAGGGATTAGCTTTGTACTTAAACTTGTTGTTTTTAAGTGGATTTCCACAAAGTGTTAGAAAAAGTCATTCGAGA
AGAAGGCGTGAGTTTTAATC

Downstream 100 bases:

>100_bases
AACCACTCTCTATCCAGAAAAATATAGACCGCTTAGTCTTTTCCAGGACTAAGTGGTCTACATTTTTACCCAAAATGCAG
CTCACGCAATAGACATCTCG

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTSPHNFVSGAIDLGEVKARADARQKAHEQGPVTQGIASSLDVTMENLENEVLRRSTQVPVIVLVGTPRSPDSEQLKSDL
TTLAAESGRKFIFGYVNADTDADVAQVFGVQGLPSVIAVAAGRPLADFQGGQPADALKQWTDQVVQAVGGQLEGLPEEAT
DGEQEDAPVEDPRFDAATDALNRGAFDEAIAVYESILAQEPNNADAKQARDTAKLLGRLATVDPSVDVVAAADADPTNVD
LAYTAADAAVVAGDPEAAFDRLIALLTISAGDQKNQVKERLLELFGMFETADPRVLQARGKMASALF

Sequences:

>Translated_307_residues
MTSPHNFVSGAIDLGEVKARADARQKAHEQGPVTQGIASSLDVTMENLENEVLRRSTQVPVIVLVGTPRSPDSEQLKSDL
TTLAAESGRKFIFGYVNADTDADVAQVFGVQGLPSVIAVAAGRPLADFQGGQPADALKQWTDQVVQAVGGQLEGLPEEAT
DGEQEDAPVEDPRFDAATDALNRGAFDEAIAVYESILAQEPNNADAKQARDTAKLLGRLATVDPSVDVVAAADADPTNVD
LAYTAADAAVVAGDPEAAFDRLIALLTISAGDQKNQVKERLLELFGMFETADPRVLQARGKMASALF
>Mature_306_residues
TSPHNFVSGAIDLGEVKARADARQKAHEQGPVTQGIASSLDVTMENLENEVLRRSTQVPVIVLVGTPRSPDSEQLKSDLT
TLAAESGRKFIFGYVNADTDADVAQVFGVQGLPSVIAVAAGRPLADFQGGQPADALKQWTDQVVQAVGGQLEGLPEEATD
GEQEDAPVEDPRFDAATDALNRGAFDEAIAVYESILAQEPNNADAKQARDTAKLLGRLATVDPSVDVVAAADADPTNVDL
AYTAADAAVVAGDPEAAFDRLIALLTISAGDQKNQVKERLLELFGMFETADPRVLQARGKMASALF

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 32367; Mature: 32236

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPHNFVSGAIDLGEVKARADARQKAHEQGPVTQGIASSLDVTMENLENEVLRRSTQVP
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VIVLVGTPRSPDSEQLKSDLTTLAAESGRKFIFGYVNADTDADVAQVFGVQGLPSVIAVA
EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCHHHHHHH
AGRPLADFQGGQPADALKQWTDQVVQAVGGQLEGLPEEATDGEQEDAPVEDPRFDAATDA
CCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LNRGAFDEAIAVYESILAQEPNNADAKQARDTAKLLGRLATVDPSVDVVAAADADPTNVD
HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCE
LAYTAADAAVVAGDPEAAFDRLIALLTISAGDQKNQVKERLLELFGMFETADPRVLQARG
EEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
KMASALF
HHHHHCC
>Mature Secondary Structure 
TSPHNFVSGAIDLGEVKARADARQKAHEQGPVTQGIASSLDVTMENLENEVLRRSTQVP
CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VIVLVGTPRSPDSEQLKSDLTTLAAESGRKFIFGYVNADTDADVAQVFGVQGLPSVIAVA
EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCHHHHHHH
AGRPLADFQGGQPADALKQWTDQVVQAVGGQLEGLPEEATDGEQEDAPVEDPRFDAATDA
CCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LNRGAFDEAIAVYESILAQEPNNADAKQARDTAKLLGRLATVDPSVDVVAAADADPTNVD
HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCE
LAYTAADAAVVAGDPEAAFDRLIALLTISAGDQKNQVKERLLELFGMFETADPRVLQARG
EEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
KMASALF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]