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The map label for this gene is atoE [H]

Identifier: 62390057

GI number: 62390057

Start: 1230186

End: 1230566

Strand: Direct

Name: atoE [H]

Synonym: cg1321

Alternate gene names: 62390057

Gene position: 1230186-1230566 (Clockwise)

Preceding gene: 62390056

Following gene: 62390059

Centisome position: 37.47

GC content: 51.71

Gene sequence:

>381_bases
TTGATTTCCTTCACCGGTCTGGGTGTTGTGATCTCCGGATTTTTCACCTCGATTTCCACGGCAACCACGTGGCCTGTCAT
CGCGTTCCTCTACTCTGGACTGCTCAACATCGCGGTGCCTTCAGGTGGCTCGAAATTCATCATCGAAGCCCCGTACATCA
TCCCAACCCCAGTGGATCTTGGCGCTGACATGGGCCTTGTCCTGCAGGCTTATCAAATGAGTGATGGCGCGACCAACCTG
CTCATTCCGTTCTTCGCGCTGCCATATTTGGCCAATTTCAAGATCAAATTCAGCCAAGTGGTGGGCTATACAGTTCCGCC
TGTCCTCGTTGTTATCGCCGTGATCTGCATTTACCTGTTCCTGCGAGCATCAATCATTTAA

Upstream 100 bases:

>100_bases
TAATTACGGGCCAGAGTATTAAGCAAAGCTTATTCGCGAAGGCATCCAAGGAACGTGGGGATTCATTCTTCAATTCCCGT
TCTACGCAGGCATTTTCGGG

Downstream 100 bases:

>100_bases
AAAGATGCTTCTCGACGCCAAAAGCCGCGGCACCTTCAGCAATTACTGAAGGTGCCGCGGCTTTTTGTTTGTGGGCGCTT
AAGCAGCCTTGATTGCGGAG

Product: short-chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MISFTGLGVVISGFFTSISTATTWPVIAFLYSGLLNIAVPSGGSKFIIEAPYIIPTPVDLGADMGLVLQAYQMSDGATNL
LIPFFALPYLANFKIKFSQVVGYTVPPVLVVIAVICIYLFLRASII

Sequences:

>Translated_126_residues
MISFTGLGVVISGFFTSISTATTWPVIAFLYSGLLNIAVPSGGSKFIIEAPYIIPTPVDLGADMGLVLQAYQMSDGATNL
LIPFFALPYLANFKIKFSQVVGYTVPPVLVVIAVICIYLFLRASII
>Mature_126_residues
MISFTGLGVVISGFFTSISTATTWPVIAFLYSGLLNIAVPSGGSKFIIEAPYIIPTPVDLGADMGLVLQAYQMSDGATNL
LIPFFALPYLANFKIKFSQVVGYTVPPVLVVIAVICIYLFLRASII

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=122, Percent_Identity=38.5245901639344, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 13483; Mature: 13483

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFTGLGVVISGFFTSISTATTWPVIAFLYSGLLNIAVPSGGSKFIIEAPYIIPTPVDL
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCCEEEEECCEEECCCCCC
GADMGLVLQAYQMSDGATNLLIPFFALPYLANFKIKFSQVVGYTVPPVLVVIAVICIYLF
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEHHHCCCCCHHHHHHHHHHHHHHH
LRASII
HHHHCC
>Mature Secondary Structure
MISFTGLGVVISGFFTSISTATTWPVIAFLYSGLLNIAVPSGGSKFIIEAPYIIPTPVDL
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCCEEEEECCEEECCCCCC
GADMGLVLQAYQMSDGATNLLIPFFALPYLANFKIKFSQVVGYTVPPVLVVIAVICIYLF
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEHHHCCCCCHHHHHHHHHHHHHHH
LRASII
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]