| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is tfdF [H]
Identifier: 62390047
GI number: 62390047
Start: 1216339
End: 1217409
Strand: Direct
Name: tfdF [H]
Synonym: cg1310
Alternate gene names: 62390047
Gene position: 1216339-1217409 (Clockwise)
Preceding gene: 62390046
Following gene: 62390048
Centisome position: 37.05
GC content: 52.29
Gene sequence:
>1071_bases ATGTCTTTACAGTTCGATCATGAAACCCTCGGTCAACGAGTTCTGTTCGGTTCAGGTGAGGCGGCGCAAAATCTCGCCGC TGAAATTAGCCGACTCGATGCCAAAAACGTCATGGTGGTTGCCGGTGATTTCGAGCTTCCCATGGCACGGCAAGTAGCAG CAGATATTGATGTCAAGGTGTGGCATTCAAATGTCGTGATGCATGTGCCCATCGAAACAGCAGAAGAAGCACGCAGTGTT GCGAAAGAAAACGACATTGATGTTGTGGTGTGTGTGGGCGGTGGATCCACAACAGGTCTAGCTAAAGCGATTGCCATGAC CACCGCATTGCCGATCATTGCGGTACCCACTACTTATGCAGGTTCTGAAGCAACAAATGTGTGGGGATTGACCGAAGCCG CGCGCAAAACAACTGGTGTTGATAACAAAGTGCTGCCAGTGACAGTTATCTACGATTCAGCGTTAACCATGTCTTTGCCG GTAGAAATGTCGGTTGCTTCTGGTCTCAATGGTTTGGCTCACTGCATTGATTCTTTGTGGGGACCGAAGGCGGATCCCAT CAATGCGGCTATGGCTGCTGAGGGAATTCGAGCACTTTCTGCTGGCCTTCCCAAGATTGTGGCAGATGCTCAGGACGTAG ATGGTCGCGATGAAGCGCTCTACGGTGCCTACCTGGCTGCGGTGTCTTTTGCCTCTGCTGGCTCTGGTCTCCACCACAAG ATCTGCCACGTGTTGGGTGGAACTTTTAACCTTCCACACGCGCAAACCCATGCAACAGTACTGCCTTATGTTCTTGCCTT CAACGCGCCATATGCGCCACAGGCAGAACAACGCGCAGCGGCAGCTTTCGGTTCTGCGACAGCACTTGAAGGATTGCAAC AGCTGCGTGCCCAAGTGGGAGCACCACAGCGACTATCCGATTACGGATTCACCGCAGCAGGAATCCCAGAGGCAGTGGAA ATCATCTTGGAGAAAGTACCGGCGAATAATCCACGGACGGTCACAGAAGAAAACCTCACTGCGCTGCTTACCACAGCGCT CAACGGCGACGATCCAGCAACTTTGAATTAA
Upstream 100 bases:
>100_bases CTATTCCACAGCAGTGGACGCTGAACAACTTCAAACACAGATTAAGCAGCTATCGGATCTACTTCACCTCAACTCAGTTG TCGGAGCATAGGAGCTAAAA
Downstream 100 bases:
>100_bases GGAGACCAACATGACTATTTCAGCACAACAGCAAGCAGTGGAAGAAGACCTTGTAGAGCGCGTACTCGCATCTTTTGATT CGTGTGAAAACCCTCGCCTC
Product: maleylacetate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSLQFDHETLGQRVLFGSGEAAQNLAAEISRLDAKNVMVVAGDFELPMARQVAADIDVKVWHSNVVMHVPIETAEEARSV AKENDIDVVVCVGGGSTTGLAKAIAMTTALPIIAVPTTYAGSEATNVWGLTEAARKTTGVDNKVLPVTVIYDSALTMSLP VEMSVASGLNGLAHCIDSLWGPKADPINAAMAAEGIRALSAGLPKIVADAQDVDGRDEALYGAYLAAVSFASAGSGLHHK ICHVLGGTFNLPHAQTHATVLPYVLAFNAPYAPQAEQRAAAAFGSATALEGLQQLRAQVGAPQRLSDYGFTAAGIPEAVE IILEKVPANNPRTVTEENLTALLTTALNGDDPATLN
Sequences:
>Translated_356_residues MSLQFDHETLGQRVLFGSGEAAQNLAAEISRLDAKNVMVVAGDFELPMARQVAADIDVKVWHSNVVMHVPIETAEEARSV AKENDIDVVVCVGGGSTTGLAKAIAMTTALPIIAVPTTYAGSEATNVWGLTEAARKTTGVDNKVLPVTVIYDSALTMSLP VEMSVASGLNGLAHCIDSLWGPKADPINAAMAAEGIRALSAGLPKIVADAQDVDGRDEALYGAYLAAVSFASAGSGLHHK ICHVLGGTFNLPHAQTHATVLPYVLAFNAPYAPQAEQRAAAAFGSATALEGLQQLRAQVGAPQRLSDYGFTAAGIPEAVE IILEKVPANNPRTVTEENLTALLTTALNGDDPATLN >Mature_355_residues SLQFDHETLGQRVLFGSGEAAQNLAAEISRLDAKNVMVVAGDFELPMARQVAADIDVKVWHSNVVMHVPIETAEEARSVA KENDIDVVVCVGGGSTTGLAKAIAMTTALPIIAVPTTYAGSEATNVWGLTEAARKTTGVDNKVLPVTVIYDSALTMSLPV EMSVASGLNGLAHCIDSLWGPKADPINAAMAAEGIRALSAGLPKIVADAQDVDGRDEALYGAYLAAVSFASAGSGLHHKI CHVLGGTFNLPHAQTHATVLPYVLAFNAPYAPQAEQRAAAAFGSATALEGLQQLRAQVGAPQRLSDYGFTAAGIPEAVEI ILEKVPANNPRTVTEENLTALLTTALNGDDPATLN
Specific function: Unknown
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI48994951, Length=299, Percent_Identity=29.4314381270903, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI87082107, Length=292, Percent_Identity=29.7945205479452, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789163, Length=379, Percent_Identity=26.6490765171504, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787493, Length=285, Percent_Identity=25.9649122807018, Blast_Score=69, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17537053, Length=426, Percent_Identity=21.5962441314554, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321181, Length=303, Percent_Identity=30.03300330033, Blast_Score=117, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.3.1.32 [H]
Molecular weight: Translated: 37027; Mature: 36896
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQFDHETLGQRVLFGSGEAAQNLAAEISRLDAKNVMVVAGDFELPMARQVAADIDVKV CCCCCCHHHHCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCEEEE WHSNVVMHVPIETAEEARSVAKENDIDVVVCVGGGSTTGLAKAIAMTTALPIIAVPTTYA EECCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCC GSEATNVWGLTEAARKTTGVDNKVLPVTVIYDSALTMSLPVEMSVASGLNGLAHCIDSLW CCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCEEEEECCEEHHHHHCCHHHHHHHHHHC GPKADPINAAMAAEGIRALSAGLPKIVADAQDVDGRDEALYGAYLAAVSFASAGSGLHHK CCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH ICHVLGGTFNLPHAQTHATVLPYVLAFNAPYAPQAEQRAAAAFGSATALEGLQQLRAQVG HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC APQRLSDYGFTAAGIPEAVEIILEKVPANNPRTVTEENLTALLTTALNGDDPATLN CCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCCCCC >Mature Secondary Structure SLQFDHETLGQRVLFGSGEAAQNLAAEISRLDAKNVMVVAGDFELPMARQVAADIDVKV CCCCCHHHHCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCEEEE WHSNVVMHVPIETAEEARSVAKENDIDVVVCVGGGSTTGLAKAIAMTTALPIIAVPTTYA EECCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCC GSEATNVWGLTEAARKTTGVDNKVLPVTVIYDSALTMSLPVEMSVASGLNGLAHCIDSLW CCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCEEEEECCEEHHHHHCCHHHHHHHHHHC GPKADPINAAMAAEGIRALSAGLPKIVADAQDVDGRDEALYGAYLAAVSFASAGSGLHHK CCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH ICHVLGGTFNLPHAQTHATVLPYVLAFNAPYAPQAEQRAAAAFGSATALEGLQQLRAQVG HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC APQRLSDYGFTAAGIPEAVEIILEKVPANNPRTVTEENLTALLTTALNGDDPATLN CCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]