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The map label for this gene is ywmD [H]

Identifier: 62389907

GI number: 62389907

Start: 1074806

End: 1076710

Strand: Reverse

Name: ywmD [H]

Synonym: cg1159

Alternate gene names: 62389907

Gene position: 1076710-1074806 (Counterclockwise)

Preceding gene: 62389908

Following gene: 62389905

Centisome position: 32.8

GC content: 52.7

Gene sequence:

>1905_bases
GTGTCTCAGCCTCTCAGCAAGCGTCTCAGCATACGAAAAGCACTCGCCAGCGCCTTCATAGTTGCGCTGGCGTTTTCGCT
TTCCCCAGTAGCCAAAGCCCAAGCCAATGAAACTCCGACGATGATCGTGTTGGACAATTCAGGCTCCATGACAGCTCAAG
ATGCCGGCGGACAGACCCGTATCGATGCAGCAAAACAAGCCTCCACTCAGTTAATTAATGACATCTCCGACCGCACCGAC
GTAGGTCTGACCTACTACGGCGGAAACACCGGCGAAACAGAAGCAGACGTTGAGATGGGATGCCAAGACGTCACCATCCT
TGGCGGCCCCTCCCGAGGAAATGCAGACACCTTAATTGACACGATCAACAGCCTGCAGCCTCGAGGCTTCACCCCCATCG
GCAAAGCACTCACCGATACCGCCGCCGAGCTCCCCGAAGGCGGAAACATTGTGTTGGTCTCCGATGGCATCGCCAACTGC
ACCCCACCGGATGTCTGCGAAGTAGCCCAAGAACTGGCTCAAAGTGGAATCAACCTGGTTATCAACACCATCGGACTAAA
TGTTGATCCAGCAGCGCGCGAAGAACTGGAGTGCATCGCTGGAGTCGGTGGTGGCACTTACGCGGATGCTTCCGACGCGC
AGAGCCTTACCGATGCGCTGACACGAGCCGCCAGTAGGCAATACAACTCTTACACCTCCGATGTGACAAAAATTGATGGG
GCATCGGAACAAAGCGCAGCCGTAGAAATTGATGAGGATACAGAACTATTCCTCACCGACCTGCCACAAGAATCCCGCTT
TTGGAAAATCCCTGTAGAGCCAGGTGAAACCATCTCAGTTTCTGCCAACACAGTTACCGACCCAACAGTACTCACCATGG
GGCAAGGCGGAATCAAGCTTGAAGCCCAACTCCATACTGAAGAGGCTCCACAATACGGCCTGCGTGGTCGGTGCACTCGG
GTCTCATTTGATAATTTCAAGCCCGGCCTTGGTGTACGCGGAATCCAAAACGCGTCCGTTGCATCAAAAGAAGTGGGCAC
CAACAACTGTGACACCGATGCCATCTACCTCGAAATTTCTAGAAGCGGAGATTACCTCAACGGGCAGGACATTCCAACGG
AAATCACCATCGAGCGCTTCGGAAAAGTAGATGAATCAACAATCGGAAATGTCACAGAGGAACATAGCTCCGTCGATCTT
ACCGAGGCTGCAGCATCAGAGGCACACCCTGTCACACCTGGCCAGTGGTTCACATCGGCCGCTGATCTAGATCCCGCAGG
TGAGAAAGTCTCCTCCATCATCGTTCCAGGAGAAACCCACTTCTATGCGGTGCCTGTCGACTACGGCCAAGAACTGCGCG
CAGCTGTAGAAACAACTTTTGACCAAATCGACAGTTCCGCGCTTGGCACGCATCTTTATATCCAAGCGTTCAGCCCAAAC
CGGGCAGAGATAGAGCTCACCAATAGAGATACGTCATATGCGGACGACAACGGGCTCAAAACTTTTGGATTCTTCACCCC
AGTGAGTGCAGCAAATTTGTTCGAGAAAAGTTCTCAAGGCATATCGCTAAGGAGCCCATGGCAAGGTGGCACCCAATACC
TCGCAGTGACATACCTACCAAGTGGTCAAGATGAAGATGTATCCGCAACTGATCAGCTGCCCACATTGGAATATGAACTC
GTGGCAGAAGCGTTTGGAGACCCTGTTGACCCACCGGTTTTCGCTTCATTGACGGGAGCAACCCCAAGCACCTCCACCCC
CCCATCAGATGTTGCGGAAGATGAACAAATCTCCGAGGCAACAGAAGAAGACTCAAGCAGTTTCCCCATCGTGTGGATTG
GGCTGGGTGTCATTGGCTTAGGCATAATCATTGGTTTGATCTTTGCGCTGAGAAGAAAGAATTAA

Upstream 100 bases:

>100_bases
CCAGCCCGCCCAATAAATAATTTCTCTCTTCTAATTGCGGAGCCTCATATATTGAGTACGGTATTTTGAAACACCTTCAG
CCCCCTTTTTAGGAGCCACA

Downstream 100 bases:

>100_bases
GCCCTAAAAGATAAAGAGTCCGGTGACTGTGTAGAGTCACCGGACTTTCTATATTTAATTCACAAACCTTTGGTGGTTCG
ACCAATTCTTAATTGGTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 633

Protein sequence:

>634_residues
MSQPLSKRLSIRKALASAFIVALAFSLSPVAKAQANETPTMIVLDNSGSMTAQDAGGQTRIDAAKQASTQLINDISDRTD
VGLTYYGGNTGETEADVEMGCQDVTILGGPSRGNADTLIDTINSLQPRGFTPIGKALTDTAAELPEGGNIVLVSDGIANC
TPPDVCEVAQELAQSGINLVINTIGLNVDPAAREELECIAGVGGGTYADASDAQSLTDALTRAASRQYNSYTSDVTKIDG
ASEQSAAVEIDEDTELFLTDLPQESRFWKIPVEPGETISVSANTVTDPTVLTMGQGGIKLEAQLHTEEAPQYGLRGRCTR
VSFDNFKPGLGVRGIQNASVASKEVGTNNCDTDAIYLEISRSGDYLNGQDIPTEITIERFGKVDESTIGNVTEEHSSVDL
TEAAASEAHPVTPGQWFTSAADLDPAGEKVSSIIVPGETHFYAVPVDYGQELRAAVETTFDQIDSSALGTHLYIQAFSPN
RAEIELTNRDTSYADDNGLKTFGFFTPVSAANLFEKSSQGISLRSPWQGGTQYLAVTYLPSGQDEDVSATDQLPTLEYEL
VAEAFGDPVDPPVFASLTGATPSTSTPPSDVAEDEQISEATEEDSSSFPIVWIGLGVIGLGIIIGLIFALRRKN

Sequences:

>Translated_634_residues
MSQPLSKRLSIRKALASAFIVALAFSLSPVAKAQANETPTMIVLDNSGSMTAQDAGGQTRIDAAKQASTQLINDISDRTD
VGLTYYGGNTGETEADVEMGCQDVTILGGPSRGNADTLIDTINSLQPRGFTPIGKALTDTAAELPEGGNIVLVSDGIANC
TPPDVCEVAQELAQSGINLVINTIGLNVDPAAREELECIAGVGGGTYADASDAQSLTDALTRAASRQYNSYTSDVTKIDG
ASEQSAAVEIDEDTELFLTDLPQESRFWKIPVEPGETISVSANTVTDPTVLTMGQGGIKLEAQLHTEEAPQYGLRGRCTR
VSFDNFKPGLGVRGIQNASVASKEVGTNNCDTDAIYLEISRSGDYLNGQDIPTEITIERFGKVDESTIGNVTEEHSSVDL
TEAAASEAHPVTPGQWFTSAADLDPAGEKVSSIIVPGETHFYAVPVDYGQELRAAVETTFDQIDSSALGTHLYIQAFSPN
RAEIELTNRDTSYADDNGLKTFGFFTPVSAANLFEKSSQGISLRSPWQGGTQYLAVTYLPSGQDEDVSATDQLPTLEYEL
VAEAFGDPVDPPVFASLTGATPSTSTPPSDVAEDEQISEATEEDSSSFPIVWIGLGVIGLGIIIGLIFALRRKN
>Mature_633_residues
SQPLSKRLSIRKALASAFIVALAFSLSPVAKAQANETPTMIVLDNSGSMTAQDAGGQTRIDAAKQASTQLINDISDRTDV
GLTYYGGNTGETEADVEMGCQDVTILGGPSRGNADTLIDTINSLQPRGFTPIGKALTDTAAELPEGGNIVLVSDGIANCT
PPDVCEVAQELAQSGINLVINTIGLNVDPAAREELECIAGVGGGTYADASDAQSLTDALTRAASRQYNSYTSDVTKIDGA
SEQSAAVEIDEDTELFLTDLPQESRFWKIPVEPGETISVSANTVTDPTVLTMGQGGIKLEAQLHTEEAPQYGLRGRCTRV
SFDNFKPGLGVRGIQNASVASKEVGTNNCDTDAIYLEISRSGDYLNGQDIPTEITIERFGKVDESTIGNVTEEHSSVDLT
EAAASEAHPVTPGQWFTSAADLDPAGEKVSSIIVPGETHFYAVPVDYGQELRAAVETTFDQIDSSALGTHLYIQAFSPNR
AEIELTNRDTSYADDNGLKTFGFFTPVSAANLFEKSSQGISLRSPWQGGTQYLAVTYLPSGQDEDVSATDQLPTLEYELV
AEAFGDPVDPPVFASLTGATPSTSTPPSDVAEDEQISEATEEDSSSFPIVWIGLGVIGLGIIIGLIFALRRKN

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywmC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 67064; Mature: 66933

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPLSKRLSIRKALASAFIVALAFSLSPVAKAQANETPTMIVLDNSGSMTAQDAGGQTR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCEEECCCCCCCH
IDAAKQASTQLINDISDRTDVGLTYYGGNTGETEADVEMGCQDVTILGGPSRGNADTLID
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHH
TINSLQPRGFTPIGKALTDTAAELPEGGNIVLVSDGIANCTPPDVCEVAQELAQSGINLV
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEE
INTIGLNVDPAAREELECIAGVGGGTYADASDAQSLTDALTRAASRQYNSYTSDVTKIDG
EEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
ASEQSAAVEIDEDTELFLTDLPQESRFWKIPVEPGETISVSANTVTDPTVLTMGQGGIKL
CCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCEEE
EAQLHTEEAPQYGLRGRCTRVSFDNFKPGLGVRGIQNASVASKEVGTNNCDTDAIYLEIS
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEE
RSGDYLNGQDIPTEITIERFGKVDESTIGNVTEEHSSVDLTEAAASEAHPVTPGQWFTSA
CCCCCCCCCCCCCEEEHHHHCCCCCHHCCCCHHHCCCCCHHHHHCCCCCCCCCCHHHCCC
ADLDPAGEKVSSIIVPGETHFYAVPVDYGQELRAAVETTFDQIDSSALGTHLYIQAFSPN
CCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHCCCEEEEEEECCC
RAEIELTNRDTSYADDNGLKTFGFFTPVSAANLFEKSSQGISLRSPWQGGTQYLAVTYLP
CEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEECCCCCCCCEEEEEEECC
SGQDEDVSATDQLPTLEYELVAEAFGDPVDPPVFASLTGATPSTSTPPSDVAEDEQISEA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
TEEDSSSFPIVWIGLGVIGLGIIIGLIFALRRKN
HHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQPLSKRLSIRKALASAFIVALAFSLSPVAKAQANETPTMIVLDNSGSMTAQDAGGQTR
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCEEECCCCCCCH
IDAAKQASTQLINDISDRTDVGLTYYGGNTGETEADVEMGCQDVTILGGPSRGNADTLID
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHH
TINSLQPRGFTPIGKALTDTAAELPEGGNIVLVSDGIANCTPPDVCEVAQELAQSGINLV
HHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEE
INTIGLNVDPAAREELECIAGVGGGTYADASDAQSLTDALTRAASRQYNSYTSDVTKIDG
EEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
ASEQSAAVEIDEDTELFLTDLPQESRFWKIPVEPGETISVSANTVTDPTVLTMGQGGIKL
CCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCEEE
EAQLHTEEAPQYGLRGRCTRVSFDNFKPGLGVRGIQNASVASKEVGTNNCDTDAIYLEIS
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEE
RSGDYLNGQDIPTEITIERFGKVDESTIGNVTEEHSSVDLTEAAASEAHPVTPGQWFTSA
CCCCCCCCCCCCCEEEHHHHCCCCCHHCCCCHHHCCCCCHHHHHCCCCCCCCCCHHHCCC
ADLDPAGEKVSSIIVPGETHFYAVPVDYGQELRAAVETTFDQIDSSALGTHLYIQAFSPN
CCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHCCCEEEEEEECCC
RAEIELTNRDTSYADDNGLKTFGFFTPVSAANLFEKSSQGISLRSPWQGGTQYLAVTYLP
CEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEECCCCCCCCEEEEEEECC
SGQDEDVSATDQLPTLEYELVAEAFGDPVDPPVFASLTGATPSTSTPPSDVAEDEQISEA
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
TEEDSSSFPIVWIGLGVIGLGIIIGLIFALRRKN
HHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]