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The map label for this gene is ybgL [C]

Identifier: 62389892

GI number: 62389892

Start: 1059310

End: 1060068

Strand: Reverse

Name: ybgL [C]

Synonym: cg1141

Alternate gene names: 62389892

Gene position: 1060068-1059310 (Counterclockwise)

Preceding gene: 62389893

Following gene: 62389891

Centisome position: 32.29

GC content: 60.08

Gene sequence:

>759_bases
ATGACCACCATCGATCTCAACAGCGACCTCGGCGAAAGCTACGGCAGCTGGGTCATGGGCAACGACGTAGCTGTTCTTGA
CTTGGTGTCCAGCGCCAATATTGCCTGCGGTTTCCATGCCGGCGACGCCACTGTGTTGTTCAAAACTGTGCGCGCAGCCC
ATGCACGCCACGTCCGCATCGGCGCACACATTGGTTACAACGACATCGCAGGTTTTGGTCGCCGCAACCTCGACATCGCT
CACGATGACCTCGTCGCCGAAACGATCTACCAGATCGGCGCCATTCAAGCTGCGGCTAAAGCCAGCGGTGCGGTTGTGGA
ATATGTAAAACCACACGGCGCGCTGTACAACACCATTGCGGTTGACGAAGCCCAGGCCGCAGCAGTCATCGAGGGCATCA
AGCTGGTCAATCCTGAGCTCTCCCTCATGGCCCTGGCTGGCTCCCAAATCGTCGAGCAGGCCCGCGCCGTGGGGCTTCAA
GTTGAGCAGGAAACTTTCGCCGACCGCGCCTACACCGCCGATGGCCAGCTGGTTTCCCGCAAGCTTCCCGGCGCGGTACT
GCACGACCCCGAAACCGCAGCCAGGCAGGCCTTGGCGTTTGCCACCGGCCAGCCCATCACCGCGATCACCGGGGAGAGCG
TGCTTGTCGACGCCAACTCCATCTGTGTTCATGGGGATAATCCGCAAGCTCTCGCATTGGTGGAGAAAATCGTGACCACC
CTTGCAGCTCATGAGGTTCAGGTTTCCCATGCTCGTTAG

Upstream 100 bases:

>100_bases
GGGAGTCATCGGCCTGGTTATCGCATGGTTCTTGGCTTATGTCTCCTTCGGTGGAGTCTTCGATCTTCTTAGCAGTTAAC
GTTTTTTGAAAGGATTTTTC

Downstream 100 bases:

>100_bases
GCCATGTGGTGAGCAAGCAGTCATCATCGATTTGCTTGCTGAAGATGCCGAAGCCGTCCAAGGCAGCATCTTGGATGCTG
TTCTTGCACTCAACCGCTCT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRIGAHIGYNDIAGFGRRNLDIA
HDDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIAVDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAVGLQ
VEQETFADRAYTADGQLVSRKLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTT
LAAHEVQVSHAR

Sequences:

>Translated_252_residues
MTTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRIGAHIGYNDIAGFGRRNLDIA
HDDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIAVDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAVGLQ
VEQETFADRAYTADGQLVSRKLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTT
LAAHEVQVSHAR
>Mature_251_residues
TTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRIGAHIGYNDIAGFGRRNLDIAH
DDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIAVDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAVGLQV
EQETFADRAYTADGQLVSRKLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTTL
AAHEVQVSHAR

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=239, Percent_Identity=42.6778242677824, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1004_CORGL (Q8NRP4)

Other databases:

- EMBL:   BA000036
- EMBL:   BX927151
- RefSeq:   NP_600229.1
- RefSeq:   YP_225294.1
- ProteinModelPortal:   Q8NRP4
- SMR:   Q8NRP4
- GeneID:   1018991
- GeneID:   3344452
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg1141
- KEGG:   cgl:NCgl0962
- HOGENOM:   HBG482818
- OMA:   LACGFHA
- PhylomeDB:   Q8NRP4
- ProtClustDB:   PRK05406
- BioCyc:   CGLU196627:CG1141-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26380; Mature: 26249

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRI
CEEEECCCCHHHHHCCEEECCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCEEEE
GAHIGYNDIAGFGRRNLDIAHDDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIA
EEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE
VDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAVGLQVEQETFADRAYTADGQLVSR
ECCHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHCCEEHHHHHHCCEECCCCHHHHH
KLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTT
CCCCCEEECCHHHHHHHHHHHCCCCEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHH
LAAHEVQVSHAR
HHHHHEEEECCC
>Mature Secondary Structure 
TTIDLNSDLGESYGSWVMGNDVAVLDLVSSANIACGFHAGDATVLFKTVRAAHARHVRI
EEEECCCCHHHHHCCEEECCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCEEEE
GAHIGYNDIAGFGRRNLDIAHDDLVAETIYQIGAIQAAAKASGAVVEYVKPHGALYNTIA
EEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE
VDEAQAAAVIEGIKLVNPELSLMALAGSQIVEQARAVGLQVEQETFADRAYTADGQLVSR
ECCHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHCCEEHHHHHHCCEECCCCHHHHH
KLPGAVLHDPETAARQALAFATGQPITAITGESVLVDANSICVHGDNPQALALVEKIVTT
CCCCCEEECCHHHHHHHHHHHCCCCEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHH
LAAHEVQVSHAR
HHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626