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The map label for this gene is ybgK [H]

Identifier: 62389890

GI number: 62389890

Start: 1057789

End: 1058670

Strand: Reverse

Name: ybgK [H]

Synonym: cg1139

Alternate gene names: 62389890

Gene position: 1058670-1057789 (Counterclockwise)

Preceding gene: 62389891

Following gene: 62389887

Centisome position: 32.25

GC content: 52.72

Gene sequence:

>882_bases
ATGAGCTTCAAAGTAATTTCCACTGGCCCCCAAGCCATCTTCCAAGACCGAGGTCGCTTCGGTTTTGCCAGCGCTGGTGT
TGGAACCTCAGGATCCTTTGATCGTTTATCCGCTGCTCGCGCGAATCACGCTTTAGGTAATGATCCCAATGCAACCGTGG
TAGAGATTCTGCTCGGTGGCTTTGAGGTGGAGGCGTTGCACACCACCTCGATCGTGTTCACGGGAACTGAAGCTGAAGTG
ATGGTTCGAACGGCTGGTGGACAATCCAAAAATGCCACCACCAACACCATCATCGATGTTGCAGCTGGTGAACGTATCCG
CGTCGAGCCCGCAACCTATGGCATGCGTGCCTACTTTGCTGCTCGCGGTGGATTTGCAGTAGAAAAAACTTTGGGATCTG
CTTCAACCGATCTGATCTCCCACATGGGCCCTCGCCCGATCGAGCCCGGGGATGTCATTGACGTAGCAACAGACATTGCA
GATTCTCAGTGGTGGCCAAAACTTCGGCAACTGCCCACCTTATGGAAACGCATGCCAACAGAAACGCTTACCGTCATCCG
AGGTCCACGTGACAAATGGTTCACGCAAGAATCCCTCAACAACTTTTTTACTCAGGTGTTTACGGTGAGCAATGACTCCA
ACCGGATTGGTTTGCGCATGCACTCAAGCGAGCCGATCCAACATCGTGTGGAAGGCGAGCTGAAAAGTGAAGGAATGGTC
CGGGGGTCCATCCAGATTCCGCCTGGTGGAAACCCCGTGGTGTTTGGTCCCGATCATCCTGTGACCGGTGGCTATCCAGT
AATAGCAGTACTTACATCAAGGTCGTGTGATCGTTCGGCCCAGCTGTTGCCGGGCGATAAAGTCAGATTTAAATTGCTTT
AG

Upstream 100 bases:

>100_bases
AACTGCTGGGCACTACTGAGATTCCCATGTGGGATGTGGACCGGTGGCAACCATCGCTTCTCAAGCCCGGTGATTCAGTT
CGATTTGTGCAGGTGAAGAA

Downstream 100 bases:

>100_bases
GAACTTTGAGCTTGCTCTGGAACGGATAAGAGGCACTCCCACAGATCACAATCGCGCCATTGTCCTTCCATCTCGCCGTA
GGGCATCCTTGCCATTTGGT

Product: allophanate hydrolase subunit 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGGFEVEALHTTSIVFTGTEAEV
MVRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFAARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIA
DSQWWPKLRQLPTLWKRMPTETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQHRVEGELKSEGMV
RGSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL

Sequences:

>Translated_293_residues
MSFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGGFEVEALHTTSIVFTGTEAEV
MVRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFAARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIA
DSQWWPKLRQLPTLWKRMPTETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQHRVEGELKSEGMV
RGSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL
>Mature_292_residues
SFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGGFEVEALHTTSIVFTGTEAEVM
VRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFAARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIAD
SQWWPKLRQLPTLWKRMPTETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQHRVEGELKSEGMVR
GSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=292, Percent_Identity=31.1643835616438, Blast_Score=127, Evalue=9e-31,
Organism=Saccharomyces cerevisiae, GI6319685, Length=303, Percent_Identity=29.042904290429, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 31669; Mature: 31538

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGG
CCEEEECCCHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCC
FEVEALHTTSIVFTGTEAEVMVRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFA
EEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEE
ARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIADSQWWPKLRQLPTLWKRMPT
ECCCCEEEHHCCCCHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHCCC
ETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQHRVEGELKSEGMV
CEEEEEECCCHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCEE
RGSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL
EEEEECCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
SFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGG
CEEEECCCHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCC
FEVEALHTTSIVFTGTEAEVMVRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFA
EEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEE
ARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIADSQWWPKLRQLPTLWKRMPT
ECCCCEEEHHCCCCHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHCCC
ETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQHRVEGELKSEGMV
CEEEEEECCCHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCEE
RGSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL
EEEEECCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]