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The map label for this gene is yjgJ [C]

Identifier: 62389853

GI number: 62389853

Start: 1019886

End: 1020539

Strand: Direct

Name: yjgJ [C]

Synonym: cg1098

Alternate gene names: 62389853

Gene position: 1019886-1020539 (Clockwise)

Preceding gene: 62389851

Following gene: 62389854

Centisome position: 31.07

GC content: 55.05

Gene sequence:

>654_bases
ATGGTTCGACAGCGGATGACCGGCAAGGAACGTCGGGAGCAATTAATCTCTATTGGGCGTGCGGTTTTCGCTGAGCGCGG
TTTCGACGGCGCGAGTGTGGAGGAGATTGCGGCGCGTGCGAATGTGTCTAAGCCGGTGGTGTATGAGCATTTCGGTGGCA
AAGAGGGCTTGTATGCGGTGGTGATTGATCGTGAGATGGTCAAGCTGGAGGCGATGATCACGGGGTCGTTGCAGCATGGT
CGTTCGCGTTATCGCATTGAGCAGGCGGTTCTTGCGTTGTTGACGTATGTCGAAGATGAGACGGATGGCTTTTTGATTTT
GGTGCGCGATATGCGGCCCGGTGAGCGCCGGTCGTATGGCACTTTGCTTAACGACGCCACGACGCAGGTGTCGCACATCC
TCGGCAATGCCTTCACCCGATCTGGGCTCAACGCTGAGTACGCGAATCTTTATGGTCAGGCGTTGGTGGGCATGGTGTCG
ATGACGGCGCAATGGTGGTTGGATGAGCGCACTCCGCCGAAGGAAGAAGTTGCCGCACATATTGTTAATCTTTGTTGGAA
TGGTTTGACGGGGATGGAAGCCGATCCGAAGTTAACTCCCATCAGTTCTGCTGAGGGTGCGATTTTTGGTCAAGAAAAGG
AGAGTGAAGCGTGA

Upstream 100 bases:

>100_bases
CCATGGGGAACTGCAGTAATTAACTGCACCGCTAGAGTTTACATCATTGTCTTAGAAAACCAATTATTGGGGTCCGCTTA
GCTGAGATACTCTGGATGAC

Downstream 100 bases:

>100_bases
CACCTATGCTCGCGGGGCTGTTGAAGGTCGCTGCAACCGACCCCAAGTTGAAGGGGTTGATGTCGAATGTGGGGCAGCAG
CATCTGCATATCACTGGCAT

Product: TetR family regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR-Type Transcriptional Regulator; Transcriptional Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR-Family; Transcriptional Regulator TetR Family Protein; TetR-Family Protein Regulatory Protein; Transcription Regulator; Transcriptional Regulator Tetr Family

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MVRQRMTGKERREQLISIGRAVFAERGFDGASVEEIAARANVSKPVVYEHFGGKEGLYAVVIDREMVKLEAMITGSLQHG
RSRYRIEQAVLALLTYVEDETDGFLILVRDMRPGERRSYGTLLNDATTQVSHILGNAFTRSGLNAEYANLYGQALVGMVS
MTAQWWLDERTPPKEEVAAHIVNLCWNGLTGMEADPKLTPISSAEGAIFGQEKESEA

Sequences:

>Translated_217_residues
MVRQRMTGKERREQLISIGRAVFAERGFDGASVEEIAARANVSKPVVYEHFGGKEGLYAVVIDREMVKLEAMITGSLQHG
RSRYRIEQAVLALLTYVEDETDGFLILVRDMRPGERRSYGTLLNDATTQVSHILGNAFTRSGLNAEYANLYGQALVGMVS
MTAQWWLDERTPPKEEVAAHIVNLCWNGLTGMEADPKLTPISSAEGAIFGQEKESEA
>Mature_217_residues
MVRQRMTGKERREQLISIGRAVFAERGFDGASVEEIAARANVSKPVVYEHFGGKEGLYAVVIDREMVKLEAMITGSLQHG
RSRYRIEQAVLALLTYVEDETDGFLILVRDMRPGERRSYGTLLNDATTQVSHILGNAFTRSGLNAEYANLYGQALVGMVS
MTAQWWLDERTPPKEEVAAHIVNLCWNGLTGMEADPKLTPISSAEGAIFGQEKESEA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24067; Mature: 24067

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRQRMTGKERREQLISIGRAVFAERGFDGASVEEIAARANVSKPVVYEHFGGKEGLYAV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCEEEE
VIDREMVKLEAMITGSLQHGRSRYRIEQAVLALLTYVEDETDGFLILVRDMRPGERRSYG
EECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHH
TLLNDATTQVSHILGNAFTRSGLNAEYANLYGQALVGMVSMTAQWWLDERTPPKEEVAAH
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IVNLCWNGLTGMEADPKLTPISSAEGAIFGQEKESEA
HHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MVRQRMTGKERREQLISIGRAVFAERGFDGASVEEIAARANVSKPVVYEHFGGKEGLYAV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCEEEE
VIDREMVKLEAMITGSLQHGRSRYRIEQAVLALLTYVEDETDGFLILVRDMRPGERRSYG
EECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHH
TLLNDATTQVSHILGNAFTRSGLNAEYANLYGQALVGMVSMTAQWWLDERTPPKEEVAAH
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IVNLCWNGLTGMEADPKLTPISSAEGAIFGQEKESEA
HHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA