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The map label for this gene is tnp3a(ISCg3a)

Identifier: 62389849

GI number: 62389849

Start: 1016612

End: 1017322

Strand: Reverse

Name: tnp3a(ISCg3a)

Synonym: cg1094

Alternate gene names: NA

Gene position: 1017322-1016612 (Counterclockwise)

Preceding gene: 62389852

Following gene: 62389848

Centisome position: 30.99

GC content: 59.35

Gene sequence:

>711_bases
ATGGGCATCTTCTCCGGTCGGCAGTTCCCTCGTGAAATCATCCTGTGGGCGGTGCGGTGGTACTGCCGCTACGGCGTGAG
CTATCGCGACCTCGAAGAGATGATGACCGAGCGGGGAGTGCCGGTCGATCACACCACGATCTACCGCTGGGTCCAGAAAT
ATGCTCCTGAGCTGGATAAGAAGACCCGGTGGTATCGGCAAGTTCCTGACTGGCAGGCCAGGTCCTGGCGGGTGGATGAG
ACCTATATCCGGGTCGGGGGAAAGTGGTGCTACCTCTATCGGGCAATCACCGCCGGTAGCCAGACCCTGGACTTCTACCT
CTCCCCGAAGAGAAACGTCGCGGCGGCGAAGCGTTTCCTGGCGAAGACGCTGCGGTCGAATAAATCGGCAGGCTATCCGC
GGGTGATCAGCACCGACAAGGCCCCCTCACTCGCCAGGGCAATCTCTGAGCTGAAGGCGGAAGGCGTCTGTCCATCGACG
GTCGAGCATCGTCGGGTGAAATACCTCAACAACGTCATTGAAGGCGACCATGGTCGGTTAAAGCGGATCCTGGGGCCGAA
AGGCGCATTCAAAAACCGAACGTCTGCCTACCGGACGTTGAAAGGGATGGAGGCGATGCACTCATTGCGGAAGGGGCAGG
GCACGATGTTTGCCTATGGTCACCCGAATCCGGATGCAGTGATTGTTAGCCGGGTATTCGAGACGGCCTGA

Upstream 100 bases:

>100_bases
AACCATCATCTTGGAGTTCAGGGTCACCTGCAGGATAACCTAAAACGGTGCTGTTGCAAAGTTGGGGCAGTAGGAAGACC
GGCGTGGAATAATCAGGTCC

Downstream 100 bases:

>100_bases
CAACACAGGCACATAGCGTTGATCACACAATAAAAACGGAGCCTTCTTGGCTCCCGCCCCAAGTTGCAACAGCACCAAAC
GCTCTAAGGAGAGGACCATG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MGIFSGRQFPREIILWAVRWYCRYGVSYRDLEEMMTERGVPVDHTTIYRWVQKYAPELDKKTRWYRQVPDWQARSWRVDE
TYIRVGGKWCYLYRAITAGSQTLDFYLSPKRNVAAAKRFLAKTLRSNKSAGYPRVISTDKAPSLARAISELKAEGVCPST
VEHRRVKYLNNVIEGDHGRLKRILGPKGAFKNRTSAYRTLKGMEAMHSLRKGQGTMFAYGHPNPDAVIVSRVFETA

Sequences:

>Translated_236_residues
MGIFSGRQFPREIILWAVRWYCRYGVSYRDLEEMMTERGVPVDHTTIYRWVQKYAPELDKKTRWYRQVPDWQARSWRVDE
TYIRVGGKWCYLYRAITAGSQTLDFYLSPKRNVAAAKRFLAKTLRSNKSAGYPRVISTDKAPSLARAISELKAEGVCPST
VEHRRVKYLNNVIEGDHGRLKRILGPKGAFKNRTSAYRTLKGMEAMHSLRKGQGTMFAYGHPNPDAVIVSRVFETA
>Mature_235_residues
GIFSGRQFPREIILWAVRWYCRYGVSYRDLEEMMTERGVPVDHTTIYRWVQKYAPELDKKTRWYRQVPDWQARSWRVDET
YIRVGGKWCYLYRAITAGSQTLDFYLSPKRNVAAAKRFLAKTLRSNKSAGYPRVISTDKAPSLARAISELKAEGVCPSTV
EHRRVKYLNNVIEGDHGRLKRILGPKGAFKNRTSAYRTLKGMEAMHSLRKGQGTMFAYGHPNPDAVIVSRVFETA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 27291; Mature: 27160

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFSGRQFPREIILWAVRWYCRYGVSYRDLEEMMTERGVPVDHTTIYRWVQKYAPELDK
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH
KTRWYRQVPDWQARSWRVDETYIRVGGKWCYLYRAITAGSQTLDFYLSPKRNVAAAKRFL
HHHHHHCCCCCCCCCCCCCHHHEEECCHHEEEHHHHHCCCCEEEEEECCCCCHHHHHHHH
AKTLRSNKSAGYPRVISTDKAPSLARAISELKAEGVCPSTVEHRRVKYLNNVIEGDHGRL
HHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH
KRILGPKGAFKNRTSAYRTLKGMEAMHSLRKGQGTMFAYGHPNPDAVIVSRVFETA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GIFSGRQFPREIILWAVRWYCRYGVSYRDLEEMMTERGVPVDHTTIYRWVQKYAPELDK
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH
KTRWYRQVPDWQARSWRVDETYIRVGGKWCYLYRAITAGSQTLDFYLSPKRNVAAAKRFL
HHHHHHCCCCCCCCCCCCCHHHEEECCHHEEEHHHHHCCCCEEEEEECCCCCHHHHHHHH
AKTLRSNKSAGYPRVISTDKAPSLARAISELKAEGVCPSTVEHRRVKYLNNVIEGDHGRL
HHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH
KRILGPKGAFKNRTSAYRTLKGMEAMHSLRKGQGTMFAYGHPNPDAVIVSRVFETA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]