| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
Click here to switch to the map view.
The map label for this gene is 62389826
Identifier: 62389826
GI number: 62389826
Start: 993528
End: 994553
Strand: Direct
Name: 62389826
Synonym: cg1068
Alternate gene names: NA
Gene position: 993528-994553 (Clockwise)
Preceding gene: 62389824
Following gene: 62389827
Centisome position: 30.27
GC content: 58.28
Gene sequence:
>1026_bases ATGAGCATCCTTGACACGTTGAAAACTCCCGTGATTGTCGCCCCGATGGCTGGCGGCCCGTCCACTCCCGCGTTGGTCAA TGCAGCAGCAGAGGCAGGTTCCCTCGGGTTCTTGGCTGGTGGCGTCATGCCTCTTGAGCAGCTGAAACAGGAATTGTCAG AGGTAAAAGGCGTCTTTGGCGTCAACCTGTTTCGCCCGCAGACGGATGCGCCTAAGCCTTCAGACATTGATGAGCTGGCG GGATTGTTGTCCTCGGCGTTTCGGCAATTTGGCCTCGATGAGCCGACGGTGCCTACGCCGGATTTGAGCAATGGGTGGGA GGCTAAATTTGAGGCCGTTCTTGCCGCTAAGCCCGCCGTTTTTTCCTGCACCTTTGGTATTTTTAGCGCTGAAGAATTCG CCCGGATCAAAGCCACCGGAATTGAGGCGTGGGTGACGGTGACCAATCCGGAGGACGCGCTGGCTGCGCAGAAAGCTGGC GCCAACGCGCTTGTCGTGCAAGGCCCCGAGGCGGGTGGGCACCGCTCTACCTGGTCCATTGAAGTGGAGCCGGACGAGCG CGACCTGAAAACCCTCCTCGCAGCTGTCAAACAAGCGGGCGTTTACCTCCCGCTCATCGCAGCCGGCGGCCTTTCAACCT CCGCAGACGTGGCAGCAATTTTAGAAGCCGGCGCCAGCGCTGCCTCCTGTGGTTCCGCCTTTTTGCTTAGCGACGAAGCC GGCACCAGCTCACTTAACCGCGAGATCTTGGACGCCGCCCCAGCACTTGGTTTGGAATCGGTGTCATCTCGCGCATTTTC GGGCCGTTATGCCAGGGGAGTGGAAACCAGGTTCACCCGTTCGAACGAGGGGTTACCCCCGTTGTACCCATACCTCAACC CAATGATCACATCTTTACGTAAGGTGGCGGGAAGTGCAGGGAACTGGGATTACGCCTACTGCCTGGTAGGAGTCGGCCTG GAATCGATTGCGAAGGGTAGTGCAAAGCAGATACTGGAATCATTAACACCTTCCGCTTTGGGCTAA
Upstream 100 bases:
>100_bases TTGGCGGCGGGAAGTTCAGGCTTGGGGGCAAACAGTGCTTGGATTTTAGACAAAAAACTCACGGAAGTCATCCTATGGCA GGCGCGCCTAGGATGGTGCC
Downstream 100 bases:
>100_bases TGTTGGGGGGAGTGCTTTCAACTATCCACGAGAGCTGCCCAGTGATAAACCCCGGGTTAACCCCACGCCTAAGTCAGTGA AGGACTTTTTATGACGCACA
Product: oxidoreductase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSILDTLKTPVIVAPMAGGPSTPALVNAAAEAGSLGFLAGGVMPLEQLKQELSEVKGVFGVNLFRPQTDAPKPSDIDELA GLLSSAFRQFGLDEPTVPTPDLSNGWEAKFEAVLAAKPAVFSCTFGIFSAEEFARIKATGIEAWVTVTNPEDALAAQKAG ANALVVQGPEAGGHRSTWSIEVEPDERDLKTLLAAVKQAGVYLPLIAAGGLSTSADVAAILEAGASAASCGSAFLLSDEA GTSSLNREILDAAPALGLESVSSRAFSGRYARGVETRFTRSNEGLPPLYPYLNPMITSLRKVAGSAGNWDYAYCLVGVGL ESIAKGSAKQILESLTPSALG
Sequences:
>Translated_341_residues MSILDTLKTPVIVAPMAGGPSTPALVNAAAEAGSLGFLAGGVMPLEQLKQELSEVKGVFGVNLFRPQTDAPKPSDIDELA GLLSSAFRQFGLDEPTVPTPDLSNGWEAKFEAVLAAKPAVFSCTFGIFSAEEFARIKATGIEAWVTVTNPEDALAAQKAG ANALVVQGPEAGGHRSTWSIEVEPDERDLKTLLAAVKQAGVYLPLIAAGGLSTSADVAAILEAGASAASCGSAFLLSDEA GTSSLNREILDAAPALGLESVSSRAFSGRYARGVETRFTRSNEGLPPLYPYLNPMITSLRKVAGSAGNWDYAYCLVGVGL ESIAKGSAKQILESLTPSALG >Mature_340_residues SILDTLKTPVIVAPMAGGPSTPALVNAAAEAGSLGFLAGGVMPLEQLKQELSEVKGVFGVNLFRPQTDAPKPSDIDELAG LLSSAFRQFGLDEPTVPTPDLSNGWEAKFEAVLAAKPAVFSCTFGIFSAEEFARIKATGIEAWVTVTNPEDALAAQKAGA NALVVQGPEAGGHRSTWSIEVEPDERDLKTLLAAVKQAGVYLPLIAAGGLSTSADVAAILEAGASAASCGSAFLLSDEAG TSSLNREILDAAPALGLESVSSRAFSGRYARGVETRFTRSNEGLPPLYPYLNPMITSLRKVAGSAGNWDYAYCLVGVGLE SIAKGSAKQILESLTPSALG
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=367, Percent_Identity=25.6130790190736, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 35213; Mature: 35082
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILDTLKTPVIVAPMAGGPSTPALVNAAAEAGSLGFLAGGVMPLEQLKQELSEVKGVFG CCHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHC VNLFRPQTDAPKPSDIDELAGLLSSAFRQFGLDEPTVPTPDLSNGWEAKFEAVLAAKPAV CEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC FSCTFGIFSAEEFARIKATGIEAWVTVTNPEDALAAQKAGANALVVQGPEAGGHRSTWSI EEEECCHHCHHHHHHHEECCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCEEEE EVEPDERDLKTLLAAVKQAGVYLPLIAAGGLSTSADVAAILEAGASAASCGSAFLLSDEA EECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCHHCCCCEEEEECCC GTSSLNREILDAAPALGLESVSSRAFSGRYARGVETRFTRSNEGLPPLYPYLNPMITSLR CCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHH KVAGSAGNWDYAYCLVGVGLESIAKGSAKQILESLTPSALG HHHCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure SILDTLKTPVIVAPMAGGPSTPALVNAAAEAGSLGFLAGGVMPLEQLKQELSEVKGVFG CHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHC VNLFRPQTDAPKPSDIDELAGLLSSAFRQFGLDEPTVPTPDLSNGWEAKFEAVLAAKPAV CEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC FSCTFGIFSAEEFARIKATGIEAWVTVTNPEDALAAQKAGANALVVQGPEAGGHRSTWSI EEEECCHHCHHHHHHHEECCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCEEEE EVEPDERDLKTLLAAVKQAGVYLPLIAAGGLSTSADVAAILEAGASAASCGSAFLLSDEA EECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCHHCCCCEEEEECCC GTSSLNREILDAAPALGLESVSSRAFSGRYARGVETRFTRSNEGLPPLYPYLNPMITSLR CCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHH KVAGSAGNWDYAYCLVGVGLESIAKGSAKQILESLTPSALG HHHCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA