| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is qdoI [H]
Identifier: 62389786
GI number: 62389786
Start: 953300
End: 954460
Strand: Reverse
Name: qdoI [H]
Synonym: cg1020
Alternate gene names: 62389786
Gene position: 954460-953300 (Counterclockwise)
Preceding gene: 62389787
Following gene: 62389785
Centisome position: 29.08
GC content: 55.3
Gene sequence:
>1161_bases ATGGCTACCACCAGCCTCCCCACGACGATTACACCGGATTCCGAGGAGACCGTAGAAAAGCGTCACTCCCTGACCCCGAT CCTGGATTCACTTCCCTGCGAGTCAGTTCCCTATGCTCTGGCTGCAGGTGAGGGACAACAACACCAGCTTGGCCCCTACC ATCTCACAGTTATGTCCCGTCCCGAAGACAACGGTGGAATATTTTCGCTGGCTCGTGTGAGCGCAGGCAAGACTCCCGCC ACCCGGTTCTTCTCTGTCGCAGGACCGACGTTCCTCTACATGATGGAGGGGCGGTTGACTCTCTGGTTCGCTGATGGACG TCAAGAGATCATCGCTGGCGGCAGTGCCACCATTCCTACGAATACGCCCTGGTCCTTCGCCTGTGAGGGCCTAGTAAATT CAGCTCTAGTGTACTACTCATCCTCGAATGCATTCCTACACGCGGCAGAGAAACTTGGCACGTCCTCGTTCTCCCACACC TTCCGCGTCAGTGGCGAGGTCACAGGGATTCCCTACGAGGAACTGGAGGATTGCGGATTCACATTCTATGAGCGGGACCA CCTTGCCGAGCTCGGGCCGCATTTCGATCGCCTCCCAGAAGATATGAAGGCGTTTGCCCTGAACGATGGTGAGGGGGACC GGCTTGAGCAGTTCGAGCAGATCAACAGCTTCGTCTGCCGTCCGAGACACACCGGAAATCAGTTCCTCGCTATGCAGACC AAGGGTGCCAAGACGCCTTATATACCTCGTCATTTCCACCGCCTTCACACCGAAAACTTCATCTGTCTGGACGGGCGCGT CAAACTGCACGTCAACGGTCAAGAGATCATCCTCTCCCGTGGGGATTACGTTCATGCCCCAGCCGGAACCATCCACTCTT TCGCCTTCGCAGGGCACAATACCCAGATGCTGGGAGTGCTCACCACAGAGGTATTCGAGAAGTTCTTTGACTACATAAAC ACTCCGACTAATGCTCGAGTTCAGCTGGAGGACGGGGGGAAGCCATTTTTTCCTGCTGAAGCATTCGCGAAAGTCCAAGC TGAACTCGATGTCGTGGTGGTCGGCCCCCCACGAATTAGTACCCTGGATGTTGTTACAAACTCGCGTTTCGAACCAATTA ACAGAACTATCACCTATCGTGCGCTGGACGCTAACCAATAG
Upstream 100 bases:
>100_bases TGCCGCCGACCATGAGATGATCAAGCGCTTTTTCACCCTGCACCTTCGCTAAGACTCTACCTTCACCCAACTCATCATCT ACTGAAAGAAGGCTTCTGCT
Downstream 100 bases:
>100_bases TGAGTGAGCCGAAATCCCTGTTTGTAACAACACCATTAACCATCGTGTGGACTGATACTGGATTCCACCATCGCGGAAGG CGGTCTCGACAAACGCCTTA
Product: double-stranded beta-helix domain
Products: NA
Alternate protein names: Quercetinase; Flavonol 2,4-dioxygenase [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MATTSLPTTITPDSEETVEKRHSLTPILDSLPCESVPYALAAGEGQQHQLGPYHLTVMSRPEDNGGIFSLARVSAGKTPA TRFFSVAGPTFLYMMEGRLTLWFADGRQEIIAGGSATIPTNTPWSFACEGLVNSALVYYSSSNAFLHAAEKLGTSSFSHT FRVSGEVTGIPYEELEDCGFTFYERDHLAELGPHFDRLPEDMKAFALNDGEGDRLEQFEQINSFVCRPRHTGNQFLAMQT KGAKTPYIPRHFHRLHTENFICLDGRVKLHVNGQEIILSRGDYVHAPAGTIHSFAFAGHNTQMLGVLTTEVFEKFFDYIN TPTNARVQLEDGGKPFFPAEAFAKVQAELDVVVVGPPRISTLDVVTNSRFEPINRTITYRALDANQ
Sequences:
>Translated_386_residues MATTSLPTTITPDSEETVEKRHSLTPILDSLPCESVPYALAAGEGQQHQLGPYHLTVMSRPEDNGGIFSLARVSAGKTPA TRFFSVAGPTFLYMMEGRLTLWFADGRQEIIAGGSATIPTNTPWSFACEGLVNSALVYYSSSNAFLHAAEKLGTSSFSHT FRVSGEVTGIPYEELEDCGFTFYERDHLAELGPHFDRLPEDMKAFALNDGEGDRLEQFEQINSFVCRPRHTGNQFLAMQT KGAKTPYIPRHFHRLHTENFICLDGRVKLHVNGQEIILSRGDYVHAPAGTIHSFAFAGHNTQMLGVLTTEVFEKFFDYIN TPTNARVQLEDGGKPFFPAEAFAKVQAELDVVVVGPPRISTLDVVTNSRFEPINRTITYRALDANQ >Mature_385_residues ATTSLPTTITPDSEETVEKRHSLTPILDSLPCESVPYALAAGEGQQHQLGPYHLTVMSRPEDNGGIFSLARVSAGKTPAT RFFSVAGPTFLYMMEGRLTLWFADGRQEIIAGGSATIPTNTPWSFACEGLVNSALVYYSSSNAFLHAAEKLGTSSFSHTF RVSGEVTGIPYEELEDCGFTFYERDHLAELGPHFDRLPEDMKAFALNDGEGDRLEQFEQINSFVCRPRHTGNQFLAMQTK GAKTPYIPRHFHRLHTENFICLDGRVKLHVNGQEIILSRGDYVHAPAGTIHSFAFAGHNTQMLGVLTTEVFEKFFDYINT PTNARVQLEDGGKPFFPAEAFAKVQAELDVVVVGPPRISTLDVVTNSRFEPINRTITYRALDANQ
Specific function: Performs the first step in the degradation of the flavonoid quercetin by a dioxygenase reaction. The enzyme catalyzes the cleavage of the O-heteroaromatic ring of the flavonol quercetin yielding the depside 2-protocatechuoyl- phloroglucinol carboxylic aci
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013096 - InterPro: IPR011051 - InterPro: IPR014710 [H]
Pfam domain/function: PF07883 Cupin_2 [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 42729; Mature: 42598
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTSLPTTITPDSEETVEKRHSLTPILDSLPCESVPYALAAGEGQQHQLGPYHLTVMSR CCCCCCCCEECCCCHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEEC PEDNGGIFSLARVSAGKTPATRFFSVAGPTFLYMMEGRLTLWFADGRQEIIAGGSATIPT CCCCCCEEEEEEECCCCCCHHEEEECCCCEEEEEECCCEEEEEECCCEEEEECCCCCCCC NTPWSFACEGLVNSALVYYSSSNAFLHAAEKLGTSSFSHTFRVSGEVTGIPYEELEDCGF CCCHHHHHHHHHCCEEEEEECCCCEEEEHHHHCCCCCCEEEEECCEEECCCHHHHHHCCC TFYERDHLAELGPHFDRLPEDMKAFALNDGEGDRLEQFEQINSFVCRPRHTGNQFLAMQT EEECHHHHHHHCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEE KGAKTPYIPRHFHRLHTENFICLDGRVKLHVNGQEIILSRGDYVHAPAGTIHSFAFAGHN CCCCCCCCCHHHHHHCCCCEEEECCEEEEEECCCEEEEECCCEEECCCCCHHHEEECCCC TQMLGVLTTEVFEKFFDYINTPTNARVQLEDGGKPFFPAEAFAKVQAELDVVVVGPPRIS CEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHEEEEEEEEEECCCCCE TLDVVTNSRFEPINRTITYRALDANQ EEEEEECCCCCCCCCEEEEEEECCCC >Mature Secondary Structure ATTSLPTTITPDSEETVEKRHSLTPILDSLPCESVPYALAAGEGQQHQLGPYHLTVMSR CCCCCCCEECCCCHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEEC PEDNGGIFSLARVSAGKTPATRFFSVAGPTFLYMMEGRLTLWFADGRQEIIAGGSATIPT CCCCCCEEEEEEECCCCCCHHEEEECCCCEEEEEECCCEEEEEECCCEEEEECCCCCCCC NTPWSFACEGLVNSALVYYSSSNAFLHAAEKLGTSSFSHTFRVSGEVTGIPYEELEDCGF CCCHHHHHHHHHCCEEEEEECCCCEEEEHHHHCCCCCCEEEEECCEEECCCHHHHHHCCC TFYERDHLAELGPHFDRLPEDMKAFALNDGEGDRLEQFEQINSFVCRPRHTGNQFLAMQT EEECHHHHHHHCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEE KGAKTPYIPRHFHRLHTENFICLDGRVKLHVNGQEIILSRGDYVHAPAGTIHSFAFAGHN CCCCCCCCCHHHHHHCCCCEEEECCEEEEEECCCEEEEECCCEEECCCCCHHHEEECCCC TQMLGVLTTEVFEKFFDYINTPTNARVQLEDGGKPFFPAEAFAKVQAELDVVVVGPPRIS CEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHEEEEEEEEEECCCCCE TLDVVTNSRFEPINRTITYRALDANQ EEEEEECCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]