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The map label for this gene is yycB [H]

Identifier: 62389775

GI number: 62389775

Start: 939896

End: 941098

Strand: Direct

Name: yycB [H]

Synonym: cg1009

Alternate gene names: 62389775

Gene position: 939896-941098 (Clockwise)

Preceding gene: 62389774

Following gene: 62389776

Centisome position: 28.63

GC content: 52.45

Gene sequence:

>1203_bases
ATGTCCGGAACCTCCCCAAAACTAAAAGTCTTTACCTTTCTAGCTGTCCTCGTGGCAGCTTTTAATTTGCGCTCAGCCAT
CGTGTCGGTCGGCGCAGTGCTTGATGATCTCGTCCATGATTTTGGGGCGTCCGGATCAACCGCAGGAATTATCACAGCCA
TACCAGGAATCGCCTTCGGCATTTTTGGTGTGGCTGCTGTGCCTTTAGCGAAGAAAATCGGACTCAGTGGTGCACTTACA
TCCGGAATGATCGTTGGACTCATCGGGTTGTCAATCCGCCCATGGGTCGGCAACATTTGGGCATTTATCTTCCTCACCGG
CTTCGTGGTGATGGGAATTGCGGTCGCCAACATTTTGCTTCCGGCGTGGATCAAACTCCACGGTGGCAAAAGCACTGTCG
CATTGATGACGGTGTACACCACCGTGCTTGGTGTTGGATCTACCTTGGGGCCGTTGTCCACATTGCTGTTTAGCGGATCG
AATGCGTGGCGCTGGGCAATCTTTATTTGGGCACTTCCTGCCGTTTTGCAGGTGGCAATCTGGCTGCCCATGTGGTGGGA
CAAGAAGTATGACTTCCCAGCCGAGACTGTGAAATCTGGTTCGACTGGAAAGATCTGGACATCGCCAACAGCATTCTTCA
TCATGCTGTTCTTCGGTTTGCAGTCCATGAACGCATATATCCAAATGGGATGGCTGCCCAAAATCTTTATCGATGCAGGT
GTAAGTCCCGCACATGCCTCTATCGGATTGTCGATTGTGGGCATCATGGGCATTGTTGGTGGATTCACCATGCCTGTCGC
AATCGCTAGGACCAGGGATAAGAACCTCGTGTGGTTCCCCGTGGTCTTTGGTGCATCGATGTTCCTCGGTTATGTGGGAA
CGTGGCTGTGGCCGTCCCAAGGCTGGTACCTGTGGTCATTCCTTCTTGGTTTAGGTGGACTCTGCTTCCCGATGGCTATC
GCCCTGATTCCAGCGCGTACGAAAGATCCGAGAATTACCGCAAGCTTGTCTGGATTTGTGCAGCCGGTGGGTTACATTCT
TGCAGCCCTTGGGCCATTGGCAGTGGGAGCGATCTACCAGGCGATTGGCTCCTGGTCAGAGATCCTCGTTGGTTTGGCCT
TGGGCACAGTAGTGTTGTCGATTGTGGGATTCAGAGCAGCACGCAATGTGACGGTTGATGATGAATTGAGGAGATCAAAG
TAG

Upstream 100 bases:

>100_bases
GTGGCAATGCCGGAGGAACCTTACTACGAGGAGCCACGTCGAAACATTCGACACCTGGGTCAGCGTCGCGTGAGCTAGCC
ACAGGGTAAGGTTTCGGACT

Downstream 100 bases:

>100_bases
CCTCAACTAAGCGTCACGATAAGAACGAGGGGCAAGGCTGATGTACTCTGTCAACCATGGATAAACCGGTCGTGAGGGAT
GCAGCTCTGCTGATTTTTCG

Product: integral membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFGIFGVAAVPLAKKIGLSGALT
SGMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILLPAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGS
NAWRWAIFIWALPAVLQVAIWLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAG
VSPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQGWYLWSFLLGLGGLCFPMAI
ALIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQAIGSWSEILVGLALGTVVLSIVGFRAARNVTVDDELRRSK

Sequences:

>Translated_400_residues
MSGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFGIFGVAAVPLAKKIGLSGALT
SGMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILLPAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGS
NAWRWAIFIWALPAVLQVAIWLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAG
VSPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQGWYLWSFLLGLGGLCFPMAI
ALIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQAIGSWSEILVGLALGTVVLSIVGFRAARNVTVDDELRRSK
>Mature_399_residues
SGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFGIFGVAAVPLAKKIGLSGALTS
GMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILLPAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGSN
AWRWAIFIWALPAVLQVAIWLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAGV
SPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQGWYLWSFLLGLGGLCFPMAIA
LIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQAIGSWSEILVGLALGTVVLSIVGFRAARNVTVDDELRRSK

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=402, Percent_Identity=28.8557213930348, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786536, Length=378, Percent_Identity=25.3968253968254, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42448; Mature: 42317

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IFGVAAVPLAKKIGLSGALTSGMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGSNAWRWAIFIWALPAVLQVAI
HHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
WLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAG
HCCHHCCCCCCCCHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCC
VSPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQ
CCCCHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCC
GWYLWSFLLGLGGLCFPMAIALIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQ
CHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGSWSEILVGLALGTVVLSIVGFRAARNVTVDDELRRSK
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
SGTSPKLKVFTFLAVLVAAFNLRSAIVSVGAVLDDLVHDFGASGSTAGIITAIPGIAFG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IFGVAAVPLAKKIGLSGALTSGMIVGLIGLSIRPWVGNIWAFIFLTGFVVMGIAVANILL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PAWIKLHGGKSTVALMTVYTTVLGVGSTLGPLSTLLFSGSNAWRWAIFIWALPAVLQVAI
HHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
WLPMWWDKKYDFPAETVKSGSTGKIWTSPTAFFIMLFFGLQSMNAYIQMGWLPKIFIDAG
HCCHHCCCCCCCCHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCC
VSPAHASIGLSIVGIMGIVGGFTMPVAIARTRDKNLVWFPVVFGASMFLGYVGTWLWPSQ
CCCCHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCC
GWYLWSFLLGLGGLCFPMAIALIPARTKDPRITASLSGFVQPVGYILAALGPLAVGAIYQ
CHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGSWSEILVGLALGTVVLSIVGFRAARNVTVDDELRRSK
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]