| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is purH [H]
Identifier: 62389751
GI number: 62389751
Start: 921438
End: 923000
Strand: Direct
Name: purH [H]
Synonym: cg0984
Alternate gene names: 62389751
Gene position: 921438-923000 (Clockwise)
Preceding gene: 62389750
Following gene: 62389752
Centisome position: 28.07
GC content: 56.88
Gene sequence:
>1563_bases ATGAGCGATGATCGTAAGGCAATTAAACGCGCACTAATTAGCGTGTATGACAAGACTGGCCTGGAGGATCTAGCCCAGGC ACTTCACCGCGAGAACGTGGAAATTGTTTCCACCGGATCCACTGCGGCGAAGATTGCTGAGCTTGGTATTCCTGTTACCC CGGTTGAGGAGCTCACCGGTTTCCCTGAGTGCCTTGAGGGCCGTGTGAAGACACTGCACCCTAAGGTTCACGCTGGCATC TTGGCGGACACCCGCAAGGAAGACCACCTGCGTCAGCTCAAGGAACTTGAGGTCGCCCCATTCCAGCTTGTCGTGGTGAA CCTGTACCCATTTGCTGAGACCGTTGCGTCCGGCGCCGATTTCGATGCTTGCGTTGAGCAGATCGACATCGGAGGCCCAT CCATGGTTCGTGCTGCGGCAAAGAACCACCCATCTGTCGCTGTGGTTGTTTCACCGAACCGCTACGAGGATGTCCAGGAA GCTTTGAAGACCGGTGGATTCTCCCGCGCGGAGCGCACCAAGTTGGCTGCTGAGGCTTTCCGCCACACCGCAACCTACGA TGTCACCGTTGCAACCTGGATGAGCGAGCAGCTGGCTGCCGAAGATTCTGAGACTGAGTTCCCAGGTTGGATCGGCACCA CCAACACCTTGTCCCGCAGCTTGCGTTACGGTGAGAACCCTCACCAGTCTGCAGCTTTGTACGTGGGCAACACCCGCGGA CTTGCACAGGCTAAGCAGTTCCACGGCAAGGAAATGAGCTACAACAACTACACCGATTCTGATGCTGCATGGCGTGCAGC GTGGGATCACGAGCGTCCTTGTGTAGCTATCATCAAGCATGCAAACCCTTGTGGCATTGCTGTTTCTGATGAGTCCATCG CAGCGGCACACCGCGAGGCACACGCATGTGACTCTGTGTCCGCATTCGGTGGCGTCATCGCGTCCAACCGTGAAGTCAGC GTTGAGATGGCTAACCAGGTTGCAGAGATCTTCACTGAGGTCATCATCGCTCCTTCCTATGAAGAGGGCGCTGTGGAGAT CCTGAGCCAGAAGAAGAACATCCGTATTCTTCAGGCTGAAGCACCTGTGCGTAAGGGCTTTGAGTCCCGTGAGATCTCCG GCGGTCTGCTTGTTCAGGAACGCGACTTGATCCACGCTGAGGGCGACAACTCCGCAAACTGGACTCTTGCTGCCGGCTCT GCTGTTTCTCCTGAGGTTCTGAAGGACCTGGAGTTCGCGTGGACTGCAGTTCGTTCCGTGAAGTCCAACGCAATTCTGTT GGCTAAGAACGGCGCTACCGTTGGCGTTGGCATGGGACAGGTCAACCGCGTTGACTCTGCTCGCTTGGCTGTCGACCGTG CAGGTGCAGAGCGCGCTACCGGTTCCGTTGCTGCTTCCGATGCGTTCTTCCCATTCGCTGACGGCTTTGAGGTTCTCGCT GAGGCTGGCATCACTGCTGTTGTGCAGCCTGGTGGATCCATTCGCGACAACGAGGTCATTGAGGCAGCCAACAAGGCTGG CGTGACCATGTACCTGACTGGTGCGCGACACTTCGCTCACTAA
Upstream 100 bases:
>100_bases ATCAAGCAGGTTGAGCGTAAACTCATTGTAGAAGTCCTGAACAGCGTGGAATTTTCGCGTCAGGGTGGCGTACAACTCAA CTGGAGAGGCTAAATCCTTC
Downstream 100 bases:
>100_bases AGTTTTTAAAGATTTCGCTTGAAGGCAGACCATAAGGTCTGCCTTTTCGCGTATTAATGAGTACATGTCTGAACTTATTT GTGGACCAGCTATTCTCTTC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MSDDRKAIKRALISVYDKTGLEDLAQALHRENVEIVSTGSTAAKIAELGIPVTPVEELTGFPECLEGRVKTLHPKVHAGI LADTRKEDHLRQLKELEVAPFQLVVVNLYPFAETVASGADFDACVEQIDIGGPSMVRAAAKNHPSVAVVVSPNRYEDVQE ALKTGGFSRAERTKLAAEAFRHTATYDVTVATWMSEQLAAEDSETEFPGWIGTTNTLSRSLRYGENPHQSAALYVGNTRG LAQAKQFHGKEMSYNNYTDSDAAWRAAWDHERPCVAIIKHANPCGIAVSDESIAAAHREAHACDSVSAFGGVIASNREVS VEMANQVAEIFTEVIIAPSYEEGAVEILSQKKNIRILQAEAPVRKGFESREISGGLLVQERDLIHAEGDNSANWTLAAGS AVSPEVLKDLEFAWTAVRSVKSNAILLAKNGATVGVGMGQVNRVDSARLAVDRAGAERATGSVAASDAFFPFADGFEVLA EAGITAVVQPGGSIRDNEVIEAANKAGVTMYLTGARHFAH
Sequences:
>Translated_520_residues MSDDRKAIKRALISVYDKTGLEDLAQALHRENVEIVSTGSTAAKIAELGIPVTPVEELTGFPECLEGRVKTLHPKVHAGI LADTRKEDHLRQLKELEVAPFQLVVVNLYPFAETVASGADFDACVEQIDIGGPSMVRAAAKNHPSVAVVVSPNRYEDVQE ALKTGGFSRAERTKLAAEAFRHTATYDVTVATWMSEQLAAEDSETEFPGWIGTTNTLSRSLRYGENPHQSAALYVGNTRG LAQAKQFHGKEMSYNNYTDSDAAWRAAWDHERPCVAIIKHANPCGIAVSDESIAAAHREAHACDSVSAFGGVIASNREVS VEMANQVAEIFTEVIIAPSYEEGAVEILSQKKNIRILQAEAPVRKGFESREISGGLLVQERDLIHAEGDNSANWTLAAGS AVSPEVLKDLEFAWTAVRSVKSNAILLAKNGATVGVGMGQVNRVDSARLAVDRAGAERATGSVAASDAFFPFADGFEVLA EAGITAVVQPGGSIRDNEVIEAANKAGVTMYLTGARHFAH >Mature_519_residues SDDRKAIKRALISVYDKTGLEDLAQALHRENVEIVSTGSTAAKIAELGIPVTPVEELTGFPECLEGRVKTLHPKVHAGIL ADTRKEDHLRQLKELEVAPFQLVVVNLYPFAETVASGADFDACVEQIDIGGPSMVRAAAKNHPSVAVVVSPNRYEDVQEA LKTGGFSRAERTKLAAEAFRHTATYDVTVATWMSEQLAAEDSETEFPGWIGTTNTLSRSLRYGENPHQSAALYVGNTRGL AQAKQFHGKEMSYNNYTDSDAAWRAAWDHERPCVAIIKHANPCGIAVSDESIAAAHREAHACDSVSAFGGVIASNREVSV EMANQVAEIFTEVIIAPSYEEGAVEILSQKKNIRILQAEAPVRKGFESREISGGLLVQERDLIHAEGDNSANWTLAAGSA VSPEVLKDLEFAWTAVRSVKSNAILLAKNGATVGVGMGQVNRVDSARLAVDRAGAERATGSVAASDAFFPFADGFEVLAE AGITAVVQPGGSIRDNEVIEAANKAGVTMYLTGARHFAH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=608, Percent_Identity=32.5657894736842, Blast_Score=234, Evalue=1e-61, Organism=Escherichia coli, GI1790439, Length=537, Percent_Identity=45.0651769087523, Blast_Score=427, Evalue=1e-121, Organism=Caenorhabditis elegans, GI71985564, Length=482, Percent_Identity=32.9875518672199, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI71985574, Length=314, Percent_Identity=26.1146496815287, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71985556, Length=141, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323056, Length=478, Percent_Identity=37.2384937238494, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6323768, Length=476, Percent_Identity=35.7142857142857, Blast_Score=236, Evalue=5e-63, Organism=Drosophila melanogaster, GI24649832, Length=476, Percent_Identity=35.7142857142857, Blast_Score=218, Evalue=8e-57,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 55760; Mature: 55629
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDRKAIKRALISVYDKTGLEDLAQALHRENVEIVSTGSTAAKIAELGIPVTPVEELTG CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCHHHHCC FPECLEGRVKTLHPKVHAGILADTRKEDHLRQLKELEVAPFQLVVVNLYPFAETVASGAD CHHHHCCHHHHCCCHHHHCHHHCCCCHHHHHHHHHCCCCCEEEEEEEECHHHHHHHCCCC FDACVEQIDIGGPSMVRAAAKNHPSVAVVVSPNRYEDVQEALKTGGFSRAERTKLAAEAF HHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHH RHTATYDVTVATWMSEQLAAEDSETEFPGWIGTTNTLSRSLRYGENPHQSAALYVGNTRG HHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCC LAQAKQFHGKEMSYNNYTDSDAAWRAAWDHERPCVAIIKHANPCGIAVSDESIAAAHREA HHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHH HACDSVSAFGGVIASNREVSVEMANQVAEIFTEVIIAPSYEEGAVEILSQKKNIRILQAE HHHHHHHHHCCEEECCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEC APVRKGFESREISGGLLVQERDLIHAEGDNSANWTLAAGSAVSPEVLKDLEFAWTAVRSV CHHHCCCCCCCCCCCEEEEECCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH KSNAILLAKNGATVGVGMGQVNRVDSARLAVDRAGAERATGSVAASDAFFPFADGFEVLA CCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHCCCHHCCCCEEECCCCCCCCCHHHHHH EAGITAVVQPGGSIRDNEVIEAANKAGVTMYLTGARHFAH HCCCEEEECCCCCCCCCHHHHHHCCCCEEEEEECCHHCCC >Mature Secondary Structure SDDRKAIKRALISVYDKTGLEDLAQALHRENVEIVSTGSTAAKIAELGIPVTPVEELTG CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCHHHHCC FPECLEGRVKTLHPKVHAGILADTRKEDHLRQLKELEVAPFQLVVVNLYPFAETVASGAD CHHHHCCHHHHCCCHHHHCHHHCCCCHHHHHHHHHCCCCCEEEEEEEECHHHHHHHCCCC FDACVEQIDIGGPSMVRAAAKNHPSVAVVVSPNRYEDVQEALKTGGFSRAERTKLAAEAF HHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHH RHTATYDVTVATWMSEQLAAEDSETEFPGWIGTTNTLSRSLRYGENPHQSAALYVGNTRG HHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCC LAQAKQFHGKEMSYNNYTDSDAAWRAAWDHERPCVAIIKHANPCGIAVSDESIAAAHREA HHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHH HACDSVSAFGGVIASNREVSVEMANQVAEIFTEVIIAPSYEEGAVEILSQKKNIRILQAE HHHHHHHHHCCEEECCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEC APVRKGFESREISGGLLVQERDLIHAEGDNSANWTLAAGSAVSPEVLKDLEFAWTAVRSV CHHHCCCCCCCCCCCEEEEECCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH KSNAILLAKNGATVGVGMGQVNRVDSARLAVDRAGAERATGSVAASDAFFPFADGFEVLA CCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHCCCHHCCCCEEECCCCCCCCCHHHHHH EAGITAVVQPGGSIRDNEVIEAANKAGVTMYLTGARHFAH HCCCEEEECCCCCCCCCHHHHHHCCCCEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]