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The map label for this gene is apl [H]

Identifier: 62389739

GI number: 62389739

Start: 907260

End: 907862

Strand: Reverse

Name: apl [H]

Synonym: cg0971

Alternate gene names: 62389739

Gene position: 907862-907260 (Counterclockwise)

Preceding gene: 62389740

Following gene: 62389735

Centisome position: 27.66

GC content: 55.06

Gene sequence:

>603_bases
ATGATTTTGGATTGGGTTATCTCCATCATGGAGGCACTCGGCGCCGTTGGCGTGGGTGTCGCGGTGTTTTTGGAGAACGT
TTTCCCGCCGATTCCAAGTGAGGTGGTGCTTCCGCTCGCGGGTTTCACCACCACGCAAGGCGATCTCAATGTGTGGGCGG
CGCTTATGTGGTCGGTGATCGGGTCGGTTTCCGGAGCGTTTTTGCTTTACGGGTTGGGGCGCTCAATCGGGGCGGCACGG
TTGCGGCAGGTCGCCGACTGGATGTGGCTTGTCGACGCGACCGACGTGGATAAATCCCTATCGTGGTTCGAAAAGTACGG
GAAGTATTCGGTGTTTTTCGGTCGGTTGGTGCCGGGTGTCCGAAGTTTGATTTCGATTCCGGCGGGCGTCGACAAGATGA
ATCCGGTTCTCTTCGGTGTGCTCACTGCGGTGGGCAGCACCATTTGGAATGCGGTTCTGATTTGGACTGGTGTGTGGTTG
GGGGCGGAATGGGAGACGGTGTCGATGTGGTTTGAGAGCTATTCAACGATCATTTACGTAGGTATCGCGCTCATCGTGGC
TTATGTGTTGTTTGTTTTAGTCCGTCGCCGAATTAAAACTTAA

Upstream 100 bases:

>100_bases
GTTTTGCGGTGTTGAATTGGGTGTTTAATGTGCAGTGGGCGTGGGGGATGCTCATTGCGTATCCGCTTGTTTCACATGCG
GTGATCGCGCGGAGTAAACG

Downstream 100 bases:

>100_bases
CCATCGGTTCGTAGCCGAAGGGAATGCGGTTGCTGTCATAGATTTCTTTGCCGAACGGGAAACACGTCACGGGGATCATT
CGGATGTTTGCGATCGCCAG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MILDWVISIMEALGAVGVGVAVFLENVFPPIPSEVVLPLAGFTTTQGDLNVWAALMWSVIGSVSGAFLLYGLGRSIGAAR
LRQVADWMWLVDATDVDKSLSWFEKYGKYSVFFGRLVPGVRSLISIPAGVDKMNPVLFGVLTAVGSTIWNAVLIWTGVWL
GAEWETVSMWFESYSTIIYVGIALIVAYVLFVLVRRRIKT

Sequences:

>Translated_200_residues
MILDWVISIMEALGAVGVGVAVFLENVFPPIPSEVVLPLAGFTTTQGDLNVWAALMWSVIGSVSGAFLLYGLGRSIGAAR
LRQVADWMWLVDATDVDKSLSWFEKYGKYSVFFGRLVPGVRSLISIPAGVDKMNPVLFGVLTAVGSTIWNAVLIWTGVWL
GAEWETVSMWFESYSTIIYVGIALIVAYVLFVLVRRRIKT
>Mature_200_residues
MILDWVISIMEALGAVGVGVAVFLENVFPPIPSEVVLPLAGFTTTQGDLNVWAALMWSVIGSVSGAFLLYGLGRSIGAAR
LRQVADWMWLVDATDVDKSLSWFEKYGKYSVFFGRLVPGVRSLISIPAGVDKMNPVLFGVLTAVGSTIWNAVLIWTGVWL
GAEWETVSMWFESYSTIIYVGIALIVAYVLFVLVRRRIKT

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21968; Mature: 21968

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDWVISIMEALGAVGVGVAVFLENVFPPIPSEVVLPLAGFTTTQGDLNVWAALMWSVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GSVSGAFLLYGLGRSIGAARLRQVADWMWLVDATDVDKSLSWFEKYGKYSVFFGRLVPGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
RSLISIPAGVDKMNPVLFGVLTAVGSTIWNAVLIWTGVWLGAEWETVSMWFESYSTIIYV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GIALIVAYVLFVLVRRRIKT
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILDWVISIMEALGAVGVGVAVFLENVFPPIPSEVVLPLAGFTTTQGDLNVWAALMWSVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GSVSGAFLLYGLGRSIGAARLRQVADWMWLVDATDVDKSLSWFEKYGKYSVFFGRLVPGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
RSLISIPAGVDKMNPVLFGVLTAVGSTIWNAVLIWTGVWLGAEWETVSMWFESYSTIIYV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GIALIVAYVLFVLVRRRIKT
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]