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The map label for this gene is viuB [H]

Identifier: 62389697

GI number: 62389697

Start: 849967

End: 850794

Strand: Reverse

Name: viuB [H]

Synonym: cg0921

Alternate gene names: 62389697

Gene position: 850794-849967 (Counterclockwise)

Preceding gene: 62389698

Following gene: 62389690

Centisome position: 25.92

GC content: 52.29

Gene sequence:

>828_bases
ATGTCCACAGCTCTCCCCGATCAGCTCAAGTGGGAATACAGTGCCTTCCCCGTGCAGATCTCGCAGAAGCAACGGCTTAG
TCCCGGCTTCATGCGGATCACCGTCACTGGTGACAAGCTCCGATTCTTTGGCCAGTGGGGTTTGGACCAACGCATCAAAC
TGATCATTCCAAGCCCGGCTGGGAACATCCCAGATTTCGGAATTCTCGACGAACCCACTCCCCCACCGACAACGTGGCTT
CCTCGTGCTAAGTCTTTTCCAGCGGACCAACGACCGATCTTGCGCACCTACACCCCATCTGCGGTCCGACCCGAACTATG
CGAAGTAGACATTGATATCTATCTTCACAACCCTTCGGGACCAGTATCCAGATGGGCAAAGAACTGCAGTGTTGACGATG
AACTAATCATCACCGGCCCTGACGTACGCGCAGGAGAAACCGGCTACGGAATCACCTATCATCCGACTTCTGCGATCGAT
CGCCTCTGTCTCATCGGCGATTGTGCATCAGCTCCCGCGATCGCAAATATCGTCAATCAATCAAAAGTACCTACTACGGT
TTTCCTCCACGTAGACAGCCTAGAAGATGATGTATTGATCGCCGATAGCTCCACCAAGCTCACTTTCGAAGACATCGACG
CTTACAAAGCAAAGGTCTTCCAATGGGCTTCAGCCAATGCAGCAGATCCTTCAGTACACTTCTGGATCGCCGGTGAAACT
AGCATGGTGCGCTTCATTCGCAAAGAACTAATCAACAGCTACCGAGTTGATTCCTCACGAATCACTTTCCTCGGCTACTG
GAAATACGGCCGACGAACCGTAGACTAG

Upstream 100 bases:

>100_bases
TCACCCTTGTCGATACCAGCTACTGGGTATCTGGCGTCGGTCCACTTGGCGGCAGCAAAGTCTTGGAAGACATCGATGCC
TTCCTCGACGCACAGCAATA

Downstream 100 bases:

>100_bases
CTTTCAGATTCAGACCCCAGAACGCCAAAACCCTCTTCAACAAAAGTTGAAGAGGGTTTTGGAATCTTAGTAGCGGGGGC
AGGATTCGAACCTACGACCT

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSTALPDQLKWEYSAFPVQISQKQRLSPGFMRITVTGDKLRFFGQWGLDQRIKLIIPSPAGNIPDFGILDEPTPPPTTWL
PRAKSFPADQRPILRTYTPSAVRPELCEVDIDIYLHNPSGPVSRWAKNCSVDDELIITGPDVRAGETGYGITYHPTSAID
RLCLIGDCASAPAIANIVNQSKVPTTVFLHVDSLEDDVLIADSSTKLTFEDIDAYKAKVFQWASANAADPSVHFWIAGET
SMVRFIRKELINSYRVDSSRITFLGYWKYGRRTVD

Sequences:

>Translated_275_residues
MSTALPDQLKWEYSAFPVQISQKQRLSPGFMRITVTGDKLRFFGQWGLDQRIKLIIPSPAGNIPDFGILDEPTPPPTTWL
PRAKSFPADQRPILRTYTPSAVRPELCEVDIDIYLHNPSGPVSRWAKNCSVDDELIITGPDVRAGETGYGITYHPTSAID
RLCLIGDCASAPAIANIVNQSKVPTTVFLHVDSLEDDVLIADSSTKLTFEDIDAYKAKVFQWASANAADPSVHFWIAGET
SMVRFIRKELINSYRVDSSRITFLGYWKYGRRTVD
>Mature_274_residues
STALPDQLKWEYSAFPVQISQKQRLSPGFMRITVTGDKLRFFGQWGLDQRIKLIIPSPAGNIPDFGILDEPTPPPTTWLP
RAKSFPADQRPILRTYTPSAVRPELCEVDIDIYLHNPSGPVSRWAKNCSVDDELIITGPDVRAGETGYGITYHPTSAIDR
LCLIGDCASAPAIANIVNQSKVPTTVFLHVDSLEDDVLIADSSTKLTFEDIDAYKAKVFQWASANAADPSVHFWIAGETS
MVRFIRKELINSYRVDSSRITFLGYWKYGRRTVD

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 30752; Mature: 30621

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTALPDQLKWEYSAFPVQISQKQRLSPGFMRITVTGDKLRFFGQWGLDQRIKLIIPSPA
CCCCCCCHHCEEEEECEEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCEEEEEEECCC
GNIPDFGILDEPTPPPTTWLPRAKSFPADQRPILRTYTPSAVRPELCEVDIDIYLHNPSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCC
PVSRWAKNCSVDDELIITGPDVRAGETGYGITYHPTSAIDRLCLIGDCASAPAIANIVNQ
HHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEECCHHHHHHEEEEECCCCCCHHHHHHCC
SKVPTTVFLHVDSLEDDVLIADSSTKLTFEDIDAYKAKVFQWASANAADPSVHFWIAGET
CCCCEEEEEEEECCCCCEEEECCCCEEEHHHHHHHHHHHEEECCCCCCCCCEEEEEECCH
SMVRFIRKELINSYRVDSSRITFLGYWKYGRRTVD
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEECC
>Mature Secondary Structure 
STALPDQLKWEYSAFPVQISQKQRLSPGFMRITVTGDKLRFFGQWGLDQRIKLIIPSPA
CCCCCCHHCEEEEECEEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCEEEEEEECCC
GNIPDFGILDEPTPPPTTWLPRAKSFPADQRPILRTYTPSAVRPELCEVDIDIYLHNPSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCC
PVSRWAKNCSVDDELIITGPDVRAGETGYGITYHPTSAIDRLCLIGDCASAPAIANIVNQ
HHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEECCHHHHHHEEEEECCCCCCHHHHHHCC
SKVPTTVFLHVDSLEDDVLIADSSTKLTFEDIDAYKAKVFQWASANAADPSVHFWIAGET
CCCCEEEEEEEECCCCCEEEECCCCEEEHHHHHHHHHHHEEECCCCCCCCCEEEEEECCH
SMVRFIRKELINSYRVDSSRITFLGYWKYGRRTVD
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]