Click here to switch to the map view.

The map label for this gene is pdxT [H]

Identifier: 62389678

GI number: 62389678

Start: 833444

End: 834046

Strand: Direct

Name: pdxT [H]

Synonym: cg0899

Alternate gene names: 62389678

Gene position: 833444-834046 (Clockwise)

Preceding gene: 62389677

Following gene: 62389680

Centisome position: 25.39

GC content: 57.38

Gene sequence:

>603_bases
GTGATCGTTGGAGTTTTAGCTCTCCAGGGCGGGGTGGAAGAACACCTCACCGCCTTGGAAGCTCTCGGAGCGACGACCCG
AAAAGTACGTGTGCCAAAGGACCTTGATGGTCTCGAAGGCATCGTCATCCCCGGCGGGGAATCCACCGTGTTGGACAAAC
TGGCTCGGACATTCGACGTGGTAGAACCTCTAGCGAATCTCATTCGCGACGGCCTACCCGTTTTCGCTACCTGCGCTGGC
CTGATCTATCTGGCGAAACACCTCGACAACCCAGCAAGGGGACAACAAACCTTGGCGGTAGTGGACGTGGTGGTGCGTCG
AAACGCATTTGGCGCCCAACGCGAATCCTTCGACACCACCGTGGATGTTTCCTTCGACGGTGCAACATTCCCCGGAGTGC
AGGCCTCGTTTATCCGAGCTCCCATCGTCACTGCTTTTGGTCCTACGGTAGAAGCGATCGCTGCTCTCAACGGTGGGGAG
GTGGTTGGTGTACGCCAAGGCAACATCATCGCGCTGTCTTTCCATCCCGAAGAAACCGGCGATTACCGCATCCACCAAGC
CTGGCTGGACCTGGTGAGAAAACACGCTGAACTGGCGATTTGA

Upstream 100 bases:

>100_bases
CCTCCGTCATTGCCGACGTATCCCGCGGCCTGGGTGAAGCCATGGTGGGCATCAACGTATCCGACGTCCCAGCACCACAC
CGACTCGCCGAGCGCGGCTG

Downstream 100 bases:

>100_bases
TGTTTTCGGTAGCGCTCTGTATAGTTTCTACTCGTTGCACAGAGCGCGAAAGCAATCATTGCAAAAGATTAGATGGTTTT
ATGATCATCGCGTCGCGGGG

Product: glutamine amidotransferase subunit PdxT

Products: NA

Alternate protein names: Glutamine amidotransferase glutaminase subunit pdxT [H]

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MIVGVLALQGGVEEHLTALEALGATTRKVRVPKDLDGLEGIVIPGGESTVLDKLARTFDVVEPLANLIRDGLPVFATCAG
LIYLAKHLDNPARGQQTLAVVDVVVRRNAFGAQRESFDTTVDVSFDGATFPGVQASFIRAPIVTAFGPTVEAIAALNGGE
VVGVRQGNIIALSFHPEETGDYRIHQAWLDLVRKHAELAI

Sequences:

>Translated_200_residues
MIVGVLALQGGVEEHLTALEALGATTRKVRVPKDLDGLEGIVIPGGESTVLDKLARTFDVVEPLANLIRDGLPVFATCAG
LIYLAKHLDNPARGQQTLAVVDVVVRRNAFGAQRESFDTTVDVSFDGATFPGVQASFIRAPIVTAFGPTVEAIAALNGGE
VVGVRQGNIIALSFHPEETGDYRIHQAWLDLVRKHAELAI
>Mature_200_residues
MIVGVLALQGGVEEHLTALEALGATTRKVRVPKDLDGLEGIVIPGGESTVLDKLARTFDVVEPLANLIRDGLPVFATCAG
LIYLAKHLDNPARGQQTLAVVDVVVRRNAFGAQRESFDTTVDVSFDGATFPGVQASFIRAPIVTAFGPTVEAIAALNGGE
VVGVRQGNIIALSFHPEETGDYRIHQAWLDLVRKHAELAI

Specific function: Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to pdxS [H]

COG id: COG0311

COG function: function code H; Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine amidotransferase pdxT/SNO family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323742, Length=207, Percent_Identity=36.7149758454106, Blast_Score=105, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6321048, Length=210, Percent_Identity=34.7619047619048, Blast_Score=98, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6323995, Length=210, Percent_Identity=33.8095238095238, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002161
- InterPro:   IPR021196 [H]

Pfam domain/function: PF01174 SNO [H]

EC number: NA

Molecular weight: Translated: 21273; Mature: 21273

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS51130 PDXT_SNO_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVGVLALQGGVEEHLTALEALGATTRKVRVPKDLDGLEGIVIPGGESTVLDKLARTFDV
CEEEEEEECCCHHHHHHHHHHHCCCHHEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHH
VEPLANLIRDGLPVFATCAGLIYLAKHLDNPARGQQTLAVVDVVVRRNAFGAQRESFDTT
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE
VDVSFDGATFPGVQASFIRAPIVTAFGPTVEAIAALNGGEVVGVRQGNIIALSFHPEETG
EEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCCC
DYRIHQAWLDLVRKHAELAI
CCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVGVLALQGGVEEHLTALEALGATTRKVRVPKDLDGLEGIVIPGGESTVLDKLARTFDV
CEEEEEEECCCHHHHHHHHHHHCCCHHEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHH
VEPLANLIRDGLPVFATCAGLIYLAKHLDNPARGQQTLAVVDVVVRRNAFGAQRESFDTT
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE
VDVSFDGATFPGVQASFIRAPIVTAFGPTVEAIAALNGGEVVGVRQGNIIALSFHPEETG
EEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCCC
DYRIHQAWLDLVRKHAELAI
CCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA