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The map label for this gene is lpqB [H]

Identifier: 62389644

GI number: 62389644

Start: 794481

End: 796187

Strand: Direct

Name: lpqB [H]

Synonym: cg0865

Alternate gene names: 62389644

Gene position: 794481-796187 (Clockwise)

Preceding gene: 62389643

Following gene: 62389645

Centisome position: 24.2

GC content: 58.35

Gene sequence:

>1707_bases
GTGAGTAAAATTTCGACGAAACTGAAGGCCCTCACCGCGGTGCTGTCTGTGACCACTCTGGTGGCTGGGTGTTCCACGCT
TCCGCAGAACACGGATCCGCAAGTGCTGCGCTCATTTTCCGGGTCCCAAAGCACACAAGAGATAGCAGGGCCGACCCCGA
ATCAAGATCCGGATTTGTTGATCCGCGGCTTCTTCAGCGCAGGTGCGTATCCGACTCAGCAGTATGAAGCGGCGAAGGCG
TATCTGACGGAAGGGACGCGCAGCACGTGGAATCCGGCTGCGTCGACTCGTATTTTGGATCGCATTGATCTGAACACTCT
GCCAGGTTCGACGAATGCGGAACGAACGATTGCGATCCGTGGAACGCAGGTCGGAACGTTGCTCAGCGGTGGCGTGTATC
AGCCGGAGAATGCGGAGTTTGAAGCTGAGATCACGATGCGTCGGGAAGATGGGGAGTGGCGTATCGATGCTTTGCCGGAC
GGGATTTTATTAGAGAGAAACGATCTGCGGAACCATTACACTCCGCACGATGTGTATTTCTTTGATCCTTCTGGCCAGGT
GTTGGTGGGGGATCGGCGTTGGTTGTTCAATGAGTCGCAGTCGATGTCCACGGTGCTGATGGCCCTTCTGGTTAATGGTC
CTTCGCCGGCAATTTCTCCTGGTGTGGTCAATCAGCTGTCCACGGATGCGTCGTTCGTGGGGTTCAATGATGGGGAGTAT
CAGTTCACTGGTTTGGGAAATTTGGATGATGATGCGCGTTTGCGTTTCGCCGCCCAGGCCGTGTGGACGTTGGCGCATGC
TGATGTCGCAGGCCCCTACACTTTGGTCGCTGACGGCGCGCCGTTGCTGTCGGAGTTCCCAACGCTCACCACCGATGACC
TCGCCGAATACAACCCAGAGGCTTACACCAACACGGTGTCCACGTTGTTTGCGTTGCAGGATGGATCGTTGTCGAGGGTC
AGTTCCGGCAATGTGAGTCCACTACAGGGCATTTGGAGCGGTGGAGATATCGATTCTGCAGCGATTTCCTCCTCCGCCAA
TGTGGTGGCAGCGGTACGCCACGAAAACAACGAGGCAGTGCTTACTGTTGGCTCCATGGAAGGCGTGACTTCAGATGCGT
TGAGGAGTGAAACGATCACTCGTCCCACCTTTGAATACGCGTCGAGTGGGTTGTGGGCTGTGGTGGATGGGGAGACGCCT
GTCCGAGTCGCACGATCGGCAACAACCGGTGAGCTCGTCCAGACGGAGGCGGAGATTGTGCTGCCAAGGGATGTGACGGG
TCCGATCTCTGAATTCCAACTGTCACGAACTGGGGTCCGGGCCGCCATGATCATTGAAGGCAAGGTGTACGTGGGCGTCG
TAACGCGTCCTGGTCCGGGCGAGCGGCGCGTGACAAATATCACGGAGGTGGCGCCGAGCTTGGGCGAGGCGGCGCTGTCG
ATCAACTGGCGCCCAGACGGCATTTTGCTTGTGGGCACGTCAATTCCAGAGACGCCGCTGTGGCGCGTCGAGCAGGACGG
ATCGGCGATTTCGTCGATGCCGAGCGGGAATCTCAGCGCGCCGGTGGTGGCGGTGGCAAGTTCCGCGACGACGGTCTACG
TCACTGATTCGCATGCGATGCTTCAGCTGCCGACTGCCGATAATGATATTTGGCGCGAGGTGCCCGGTTTGCTGGGCACG
CGTGCGGCGCCGGTGGTTGCGTACTGA

Upstream 100 bases:

>100_bases
CCATTTTCCGTTTGGTCTTGCCTAAAGAACCGCATGGAAATTATCGTGAAGCACCGATCCCGTTGATCGCTCCAGAGACA
CCGTGGGAAGGGGAGCAGCA

Downstream 100 bases:

>100_bases
TGGAGCTGTTCTTCCCGCGCGCATGTGGTGGTTGTGGGGCGCCGGGGGCGTCGTTATGCAGTGACTGCCAGCGTGTGTGG
AGGAAGCCGCCAACATTGGC

Product: lipoprotein LpqB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MSKISTKLKALTAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLLIRGFFSAGAYPTQQYEAAKA
YLTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIRGTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPD
GILLERNDLRNHYTPHDVYFFDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEY
QFTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPEAYTNTVSTLFALQDGSLSRV
SSGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHENNEAVLTVGSMEGVTSDALRSETITRPTFEYASSGLWAVVDGETP
VRVARSATTGELVQTEAEIVLPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALS
INWRPDGILLVGTSIPETPLWRVEQDGSAISSMPSGNLSAPVVAVASSATTVYVTDSHAMLQLPTADNDIWREVPGLLGT
RAAPVVAY

Sequences:

>Translated_568_residues
MSKISTKLKALTAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLLIRGFFSAGAYPTQQYEAAKA
YLTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIRGTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPD
GILLERNDLRNHYTPHDVYFFDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEY
QFTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPEAYTNTVSTLFALQDGSLSRV
SSGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHENNEAVLTVGSMEGVTSDALRSETITRPTFEYASSGLWAVVDGETP
VRVARSATTGELVQTEAEIVLPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALS
INWRPDGILLVGTSIPETPLWRVEQDGSAISSMPSGNLSAPVVAVASSATTVYVTDSHAMLQLPTADNDIWREVPGLLGT
RAAPVVAY
>Mature_567_residues
SKISTKLKALTAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLLIRGFFSAGAYPTQQYEAAKAY
LTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIRGTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPDG
ILLERNDLRNHYTPHDVYFFDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEYQ
FTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPEAYTNTVSTLFALQDGSLSRVS
SGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHENNEAVLTVGSMEGVTSDALRSETITRPTFEYASSGLWAVVDGETPV
RVARSATTGELVQTEAEIVLPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALSI
NWRPDGILLVGTSIPETPLWRVEQDGSAISSMPSGNLSAPVVAVASSATTVYVTDSHAMLQLPTADNDIWREVPGLLGTR
AAPVVAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpqB lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019606
- InterPro:   IPR018910 [H]

Pfam domain/function: PF10646 Germane; PF10647 Gmad1 [H]

EC number: NA

Molecular weight: Translated: 60509; Mature: 60378

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKISTKLKALTAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCE
IRGFFSAGAYPTQQYEAAKAYLTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIR
EEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEE
GTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPDGILLERNDLRNHYTPHDVYF
CCEECHHHCCCEECCCCCCEEEEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCEEEE
FDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEY
ECCCCCEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCE
QFTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPE
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCHHHHHCCCH
AYTNTVSTLFALQDGSLSRVSSGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHENNEAV
HHHHHHHEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCEEEEEEECCCCEE
LTVGSMEGVTSDALRSETITRPTFEYASSGLWAVVDGETPVRVARSATTGELVQTEAEIV
EEEECCCCCCHHHHHHCCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCHHEECCCEEE
LPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALS
ECCCCCCCHHHHHHHHCCCEEEEEEECEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
INWRPDGILLVGTSIPETPLWRVEQDGSAISSMPSGNLSAPVVAVASSATTVYVTDSHAM
EEECCCCEEEEECCCCCCCCEEEECCCCHHHCCCCCCCCCCEEEEECCCEEEEEECCCEE
LQLPTADNDIWREVPGLLGTRAAPVVAY
EEECCCCCHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
SKISTKLKALTAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCE
IRGFFSAGAYPTQQYEAAKAYLTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIR
EEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEE
GTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPDGILLERNDLRNHYTPHDVYF
CCEECHHHCCCEECCCCCCEEEEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCEEEE
FDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEY
ECCCCCEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCE
QFTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPE
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCHHHHHCCCH
AYTNTVSTLFALQDGSLSRVSSGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHENNEAV
HHHHHHHEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCEEEEEEECCCCEE
LTVGSMEGVTSDALRSETITRPTFEYASSGLWAVVDGETPVRVARSATTGELVQTEAEIV
EEEECCCCCCHHHHHHCCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCHHEECCCEEE
LPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALS
ECCCCCCCHHHHHHHHCCCEEEEEEECEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
INWRPDGILLVGTSIPETPLWRVEQDGSAISSMPSGNLSAPVVAVASSATTVYVTDSHAM
EEECCCCEEEEECCCCCCCCEEEECCCCHHHCCCCCCCCCCEEEEECCCEEEEEECCCEE
LQLPTADNDIWREVPGLLGTRAAPVVAY
EEECCCCCHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA