Click here to switch to the map view.

The map label for this gene is fecD [C]

Identifier: 62389565

GI number: 62389565

Start: 692176

End: 693195

Strand: Reverse

Name: fecD [C]

Synonym: cg0778

Alternate gene names: 62389565

Gene position: 693195-692176 (Counterclockwise)

Preceding gene: 62389569

Following gene: 62389564

Centisome position: 21.12

GC content: 56.08

Gene sequence:

>1020_bases
TTGTCGCGCACAGGTGTTTCGAAAAAACCAAAGCTCACCGCTCCTGTTGTCATCATCGGCACCCTCGTCTTGTTGATCAT
CGCCTTCACCGCTTCCCTCATGCTGGGTCCCGTGACGGTTCCATTGAATGAGCTTGCAACCAACCCCGTTGTCACCGATA
TCCGTGCACCACGCATTATCATCGCAGCATTGGTGGGTGCGGCGCTGGCTGTCTCCGGTGCGATCATGCAGACGGTGTTT
CACAACCCGTTGGCGGATCCCGGCATTGTGGGTGTGTCCTCCGGTGCAGCTGTTGCAGCTGTCTTGGCGATTGTCACCGG
TGCGAGTTTCTTTGGCCAATGGACCGTTCCTTTTGCGGCCTTCGTGGGCGCATTGGTCACGGTGGCTGTGGTATATTTGA
TCGCTAGTTCCCGCGCGATGGATGGCCGTGGCGCAGATCCGGCCACGTTGGTACTGGTCGGCATGGCTATCACTGCCTTT
TTGGGTGCTGTTATTTCCAGCGCCACTGCGAACGCACCACAAGATTCTGAGCTTCGATCCGTGACGTTTTGGCTCAACGG
CGATCTGGTATCTCGGACGTGGGAACATGTGGGCGTTGCAATAATCCCCATTATCGTTGGGTTGATTCTAGCTATCGGCG
GTTCCCGCGATCTGAACTTGTTGCTGCTGGGTGATTCCACAGCGCAAACATCTGGACTCAACGTCAACCGCGCACGCATC
ATTTTGCTAGCACTTGCGGCACTGCTCACCGCCACAGCTGTTGCGGTCTCCGGCACCATTACGTTTGTTGGATTGGTAGT
ACCCCACCTGGTGCGCATTGTTTTAGGTGCCGATCACCGAGCGTTACTCCCGGCCGCCGCGATTTTGGGCGCCACGTTTG
TTATCGTTTCCGACACTGTTGCCCGCATGATCTTCTCCCCCATCGTCTTGCAAACAGGCGTGGTGGTGGCGTTCATTGGC
TCACCAATTTTCCTTTATTTACTGCTCAGCATGCGCAAGCGACGCGGATTGGGGCTGTAA

Upstream 100 bases:

>100_bases
GAGCGGGGTTGCTATCGGCCGAAAGTTTAGGGTTTTGTTCAATCTGTTGGTTAGTATTGCTTGGGTAAACAAGTCATAAC
AATTTTCATTAAGGGTCGTT

Downstream 100 bases:

>100_bases
AAACTCATGCCTCAATTAGTTGAAATTCGTGATCTCAACGTTGAATTCCCCTCTCGCCATGCAGTGAAAAACGTGTCTTT
TTCTGCACCTGCTGGAAAAG

Product: ABC-type cobalamin/Fe3+-siderophores transport system, permease component

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSRTGVSKKPKLTAPVVIIGTLVLLIIAFTASLMLGPVTVPLNELATNPVVTDIRAPRIIIAALVGAALAVSGAIMQTVF
HNPLADPGIVGVSSGAAVAAVLAIVTGASFFGQWTVPFAAFVGALVTVAVVYLIASSRAMDGRGADPATLVLVGMAITAF
LGAVISSATANAPQDSELRSVTFWLNGDLVSRTWEHVGVAIIPIIVGLILAIGGSRDLNLLLLGDSTAQTSGLNVNRARI
ILLALAALLTATAVAVSGTITFVGLVVPHLVRIVLGADHRALLPAAAILGATFVIVSDTVARMIFSPIVLQTGVVVAFIG
SPIFLYLLLSMRKRRGLGL

Sequences:

>Translated_339_residues
MSRTGVSKKPKLTAPVVIIGTLVLLIIAFTASLMLGPVTVPLNELATNPVVTDIRAPRIIIAALVGAALAVSGAIMQTVF
HNPLADPGIVGVSSGAAVAAVLAIVTGASFFGQWTVPFAAFVGALVTVAVVYLIASSRAMDGRGADPATLVLVGMAITAF
LGAVISSATANAPQDSELRSVTFWLNGDLVSRTWEHVGVAIIPIIVGLILAIGGSRDLNLLLLGDSTAQTSGLNVNRARI
ILLALAALLTATAVAVSGTITFVGLVVPHLVRIVLGADHRALLPAAAILGATFVIVSDTVARMIFSPIVLQTGVVVAFIG
SPIFLYLLLSMRKRRGLGL
>Mature_338_residues
SRTGVSKKPKLTAPVVIIGTLVLLIIAFTASLMLGPVTVPLNELATNPVVTDIRAPRIIIAALVGAALAVSGAIMQTVFH
NPLADPGIVGVSSGAAVAAVLAIVTGASFFGQWTVPFAAFVGALVTVAVVYLIASSRAMDGRGADPATLVLVGMAITAFL
GAVISSATANAPQDSELRSVTFWLNGDLVSRTWEHVGVAIIPIIVGLILAIGGSRDLNLLLLGDSTAQTSGLNVNRARII
LLALAALLTATAVAVSGTITFVGLVVPHLVRIVLGADHRALLPAAAILGATFVIVSDTVARMIFSPIVLQTGVVVAFIGS
PIFLYLLLSMRKRRGLGL

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=309, Percent_Identity=37.8640776699029, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1788004, Length=297, Percent_Identity=35.016835016835, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1790741, Length=288, Percent_Identity=34.375, Blast_Score=141, Evalue=7e-35,
Organism=Escherichia coli, GI1786805, Length=319, Percent_Identity=36.3636363636364, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1786804, Length=288, Percent_Identity=35.7638888888889, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786347, Length=285, Percent_Identity=34.7368421052632, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34711; Mature: 34580

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTGVSKKPKLTAPVVIIGTLVLLIIAFTASLMLGPVTVPLNELATNPVVTDIRAPRII
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCHHHH
IAALVGAALAVSGAIMQTVFHNPLADPGIVGVSSGAAVAAVLAIVTGASFFGQWTVPFAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCHHHHHHH
FVGALVTVAVVYLIASSRAMDGRGADPATLVLVGMAITAFLGAVISSATANAPQDSELRS
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VTFWLNGDLVSRTWEHVGVAIIPIIVGLILAIGGSRDLNLLLLGDSTAQTSGLNVNRARI
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH
ILLALAALLTATAVAVSGTITFVGLVVPHLVRIVLGADHRALLPAAAILGATFVIVSDTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ARMIFSPIVLQTGVVVAFIGSPIFLYLLLSMRKRRGLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRTGVSKKPKLTAPVVIIGTLVLLIIAFTASLMLGPVTVPLNELATNPVVTDIRAPRII
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCHHHH
IAALVGAALAVSGAIMQTVFHNPLADPGIVGVSSGAAVAAVLAIVTGASFFGQWTVPFAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCHHHHHHH
FVGALVTVAVVYLIASSRAMDGRGADPATLVLVGMAITAFLGAVISSATANAPQDSELRS
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VTFWLNGDLVSRTWEHVGVAIIPIIVGLILAIGGSRDLNLLLLGDSTAQTSGLNVNRARI
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH
ILLALAALLTATAVAVSGTITFVGLVVPHLVRIVLGADHRALLPAAAILGATFVIVSDTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ARMIFSPIVLQTGVVVAFIGSPIFLYLLLSMRKRRGLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]