| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yfhA [H]
Identifier: 62389556
GI number: 62389556
Start: 683316
End: 684344
Strand: Reverse
Name: yfhA [H]
Synonym: cg0769
Alternate gene names: 62389556
Gene position: 684344-683316 (Counterclockwise)
Preceding gene: 62389557
Following gene: 62389555
Centisome position: 20.85
GC content: 57.34
Gene sequence:
>1029_bases ATGAGCCTTAGCCATCAACTCAAGCGCCAGCGCGCATCGCGCAACTCCCGCAGGTGGCTGATTGTTGCGGCATTGGGCGT CGTCACGCTTGGTATTTTTGCTTTTTCTTTGATGTGGGGCGAGGTGTTTTATGGCCCTGCTCAGGTGCTGAAAGTGTTGT CTGGACAGCAGGTTCCCGGCGCGAGTTATTCCGTTGGCGTGTTGCGTTTGCCGCGCGCGGTGATGGGTTTGACTGCGGGT TTGGCGTTTGGCGCGGCGGGCGTGATTTTTCAGACGGTGTTGCGTAATCAGTTGGCGTCGCCGGATATTATCGGCATTTC TTCTGGCGCGTCGGCGGCGGGCGTAATTTGCATTGTGTTTTTCGGGATGTCGCAGTCTGCAGTGTCGGCGATTTCTTTGT GTGCGTCCTTGGCTGTGGCGTTGTTGATTTATCTGGTGGCGTATCGCGGTGGTTTTTCGGCCACGCGTCTGATTCTTACC GGCATTGGTATTGCTGCGATGCTGAATTCATTAGTGTCGTATTCGCTGTCCAAGGCTGATTCTTGGGATCTGCCGACCGC GACGCGCTGGCTTACCGGCTCGCTCAATGGTGCGACGTGGGATCGTGCGATGCCGCTGATTGTCACCACTGTGGTACTCA TTCCGCTGCTGGTGGCTAATGCGCGCAATGTGGATCTTATGCGTTTGGGCAATGATTCCGCGGTGGGTTTGGGCGTTGCT ACTAATCGCACGCGCGTCATTGCGATTATTGCCGCTGTTGCGCTCATCGCCGTTGCTACCGCTGCATGCGGCCCGATCGC ATTCGTGGCGTTTGTGTCTGGCCCCATTGCCGCGCGCATTTTAGGCTCCGGCGGATCGCTCATCATCCCCTCCGCACTCA TCGGCGGGTTGATCGTGCTCATCGCCGACCTAATTGGCCAATACTTCCTCGGCACCCGCTACCCCGTCGGAGTTGTCACC GGCGCATTCGGCGCCCCATTCCTTATCTATTTACTCATTCGTTCCAACCGCGCGGGAGTAACCCTGTGA
Upstream 100 bases:
>100_bases TGGTGACTCGTCCGAGTGAAATTGCCGTGGGCATCATCATGCCGATCATTGGTGCGCCACTGTTTATTTGGATTATTCGT CGTCAGAAAGTCAAAGAGCT
Downstream 100 bases:
>100_bases CCACCAACCATCAACTATCCGCCGAAGAAATTTCCCTGGCGTACGGCGAGCGCACCATCATCGATTCGCTCAGCGTCGAC ATCGTCCCCGGCAAAATCAC
Product: ABC-type cobalamin/Fe3+-siderophores transport system, permease component
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSLSHQLKRQRASRNSRRWLIVAALGVVTLGIFAFSLMWGEVFYGPAQVLKVLSGQQVPGASYSVGVLRLPRAVMGLTAG LAFGAAGVIFQTVLRNQLASPDIIGISSGASAAGVICIVFFGMSQSAVSAISLCASLAVALLIYLVAYRGGFSATRLILT GIGIAAMLNSLVSYSLSKADSWDLPTATRWLTGSLNGATWDRAMPLIVTTVVLIPLLVANARNVDLMRLGNDSAVGLGVA TNRTRVIAIIAAVALIAVATAACGPIAFVAFVSGPIAARILGSGGSLIIPSALIGGLIVLIADLIGQYFLGTRYPVGVVT GAFGAPFLIYLLIRSNRAGVTL
Sequences:
>Translated_342_residues MSLSHQLKRQRASRNSRRWLIVAALGVVTLGIFAFSLMWGEVFYGPAQVLKVLSGQQVPGASYSVGVLRLPRAVMGLTAG LAFGAAGVIFQTVLRNQLASPDIIGISSGASAAGVICIVFFGMSQSAVSAISLCASLAVALLIYLVAYRGGFSATRLILT GIGIAAMLNSLVSYSLSKADSWDLPTATRWLTGSLNGATWDRAMPLIVTTVVLIPLLVANARNVDLMRLGNDSAVGLGVA TNRTRVIAIIAAVALIAVATAACGPIAFVAFVSGPIAARILGSGGSLIIPSALIGGLIVLIADLIGQYFLGTRYPVGVVT GAFGAPFLIYLLIRSNRAGVTL >Mature_341_residues SLSHQLKRQRASRNSRRWLIVAALGVVTLGIFAFSLMWGEVFYGPAQVLKVLSGQQVPGASYSVGVLRLPRAVMGLTAGL AFGAAGVIFQTVLRNQLASPDIIGISSGASAAGVICIVFFGMSQSAVSAISLCASLAVALLIYLVAYRGGFSATRLILTG IGIAAMLNSLVSYSLSKADSWDLPTATRWLTGSLNGATWDRAMPLIVTTVVLIPLLVANARNVDLMRLGNDSAVGLGVAT NRTRVIAIIAAVALIAVATAACGPIAFVAFVSGPIAARILGSGGSLIIPSALIGGLIVLIADLIGQYFLGTRYPVGVVTG AFGAPFLIYLLIRSNRAGVTL
Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786804, Length=329, Percent_Identity=36.7781155015198, Blast_Score=158, Evalue=4e-40, Organism=Escherichia coli, GI1790740, Length=276, Percent_Identity=36.5942028985507, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1786347, Length=319, Percent_Identity=32.6018808777429, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1786805, Length=315, Percent_Identity=34.2857142857143, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788004, Length=285, Percent_Identity=29.8245614035088, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790741, Length=275, Percent_Identity=27.6363636363636, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 35316; Mature: 35185
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSHQLKRQRASRNSRRWLIVAALGVVTLGIFAFSLMWGEVFYGPAQVLKVLSGQQVPG CCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC ASYSVGVLRLPRAVMGLTAGLAFGAAGVIFQTVLRNQLASPDIIGISSGASAAGVICIVF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHEE FGMSQSAVSAISLCASLAVALLIYLVAYRGGFSATRLILTGIGIAAMLNSLVSYSLSKAD ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SWDLPTATRWLTGSLNGATWDRAMPLIVTTVVLIPLLVANARNVDLMRLGNDSAVGLGVA CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEE TNRTRVIAIIAAVALIAVATAACGPIAFVAFVSGPIAARILGSGGSLIIPSALIGGLIVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCEEHHHHHHHHHHHH IADLIGQYFLGTRYPVGVVTGAFGAPFLIYLLIRSNRAGVTL HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLSHQLKRQRASRNSRRWLIVAALGVVTLGIFAFSLMWGEVFYGPAQVLKVLSGQQVPG CCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC ASYSVGVLRLPRAVMGLTAGLAFGAAGVIFQTVLRNQLASPDIIGISSGASAAGVICIVF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHEE FGMSQSAVSAISLCASLAVALLIYLVAYRGGFSATRLILTGIGIAAMLNSLVSYSLSKAD ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SWDLPTATRWLTGSLNGATWDRAMPLIVTTVVLIPLLVANARNVDLMRLGNDSAVGLGVA CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEE TNRTRVIAIIAAVALIAVATAACGPIAFVAFVSGPIAARILGSGGSLIIPSALIGGLIVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCEEHHHHHHHHHHHH IADLIGQYFLGTRYPVGVVTGAFGAPFLIYLLIRSNRAGVTL HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]