| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is cstA [H]
Identifier: 62389544
GI number: 62389544
Start: 669663
End: 671942
Strand: Direct
Name: cstA [H]
Synonym: cg0756
Alternate gene names: 62389544
Gene position: 669663-671942 (Clockwise)
Preceding gene: 62389539
Following gene: 62389545
Centisome position: 20.4
GC content: 53.95
Gene sequence:
>2280_bases GTGACCATAAAACAGACTGACAACATCAATGACGATGATTTGGTGTACAGCAACGCTACTGACCTTCCAGTAGGCGTGAA GAAGTCCCCTAAAATGTCACCGACCGCCCGCGTTGGTCTCCTTGTCTTTGGGGTTATCGCGGCGGTGGGTTGGGGAGCAA TCGCTTTCTCCCGTGGCGAAACAATCAACTCTGTGTGGCTGGTTTTGGCGGCAGTTGGTTCCTATATCATTGCGTTTTCT TTCTATGCCCGACTGATTGAATACAAAGTTGTTAAGCCGAAAGATCAGCGAGCAACCCCGGCGGAATACGTTAATGACGG CAAGGACTATGTCCCAACGGATCGTCGTGTGCTTTTTGGCCACCACTTTGCAGCTATTGCAGGTGCCGGTCCATTGGTTG GACCTGTCATGGCCGCGCAGATGGGCTACCTGCCAGGCACCTTGTGGATTATCCTCGGTGTGATTTTCGCCGGTGCAGTG CAGGACTACCTAGTGCTGTGGGTGTCTACTCGTAGGCGTGGACGCTCACTTGGCCAGATGGTTCGTGATGAAATGGGCAC GGTCGGTGGAGCTGCCGGTATCTTGGCGACCATCTCCATCATGATCATCATTATCGCGGTGCTCGCATTGATCGTGGTTA ATGCACTGGCTGATTCACCATGGGGCGTTTTCTCCATCACCATGACCATCCCAATTGCACTGTTCATGGGTGTGTACTTG CGTTACCTGCGCCCAGGTCGTGTTACTGAAGTGTCCATCATCGGTGTGGCACTGCTCCTGCTGGCTATCGTTGCTGGTGG TTGGGTTGCAGACACCTCATGGGGCGTGGAATGGTTCACCTGGTCTAAGACCACTTTGGCGTTGGCCTTGATCGGTTACG GAATCATGGCTGCGATTTTGCCGGTGTGGCTGCTGCTTGCACCGCGCGATTACCTGTCTACCTTTATGAAGATCGGCGTC ATCGGTCTGTTGGCAGTGGGTATTTTGTTCGCACGTCCTGAGGTGCAGATGCCTTCCGTGACCTCCTTCGCACTTGAGGG CAACGGTCCGGTGTTCTCTGGAAGTCTGTTCCCATTCCTGTTCATCACGATTGCCTGTGGTGCACTGTCTGGTTTCCACG CACTGATTTCTTCAGGAACCACACCAAAGCTTGTGGAGAAGGAATCCCAGATGCGCATGCTCGGCTACGGCGGCATGTTG ATGGAATCTTTCGTGGCGATGATGGCACTGATCACCGCTGTTATTCTGGATCGTCACCTGTACTTCTCCATGAACGCTCC GCTGGCACTGACTGGTGGAGATCCAGCAACCGCAGCTGAGTGGGTTAACTCCATTGGGCTGACAGGTGCGGATATCACCC CGGAACAGCTGTCGGAAGCTGCTGAAAGTGTCGGAGAATCCACTGTTATTTCCCGTACCGGTGGCGCACCAACCTTGGCG TTCGGTATGTCTGAAATCCTCTCCGGATTCATCGGCGGCGCTGGAATGAAGGCGTTCTGGTACCACTTCGCCATCATGTT TGAGGCTCTGTTCATCCTCACTACTGTGGATGCAGGTACTCGTGTGGCTCGCTTTATGATGACCGATACCTTGGGCAATG TTCCAGGTCTGCGCCGTTTCAAGGATCCTTCATGGACTGTCGGTAACTGGATTTCTACCGTGTTTGTGTGTGCTCTATGG GGTGCTATTTTGCTCATGGGTGTTACCGATCCACTGGGCGGCATCAACGTGCTTTTCCCACTATTCGGTATCGCTAACCA GCTGCTCGCCGCTATTGCACTTGCTCTCGTGCTGGTTGTTGTGGTGAAGAAGGGCCTGTACAAGTGGGCGTGGATTCCAG CTGTTCCTTTGGCATGGGATCTCATTGTCACGATGACTGCGTCATGGCAGAAGATTTTCCACTCTGATCCGGCTATTGGC TACTGGGCTCAGAACGCGAACTTCCGCGATGCAAAGTCTCAAGGCCTTACCGAATTTGGTGCCGCTAAATCTCCTGAGGC AATCGATGCGGTTATCCGAAACACCATGATTCAGGGCATCTTGTCCATCCTGTTCGCGGTGCTCGTCCTCGTTGTTGTCG GCGCAGCCATTGCGGTGTGCATCAAGTCCATCAGGGCTCGTGCAGCCGGAACACCTTTGGAGACCACTGAAGAGCCTGAT ACTGAATCTGAGTTCTTCGCCCCAACTGGATTCCTTGCATCTTCCAGGGATAAGGAAGTCCAGGCCATGTGGGACGAGCG CTACCCAGGCGGTGCGCCCGTGTCTTCTGGAGGGCACTAA
Upstream 100 bases:
>100_bases TCTGCATGCATTTCTGCACACAGTTTCTGCCCGCTGTTTCTGCCCGCTGTTTCTACGCATAGTGGCTTTGAAACGACCCG AAGAGAAAACAGTAAAGATC
Downstream 100 bases:
>100_bases AACATGATGGCTCTTACTCATGCACTGTGGAAAATCCCGCGGGCGGTGTGGTGGTATCTCACTGAGCTCATGGGGGACAC GGCGTATTCCAAGTATGTGG
Product: carbon starvation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MTIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGETINSVWLVLAAVGSYIIAFS FYARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFGHHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAV QDYLVLWVSTRRRGRSLGQMVRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYL RYLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAILPVWLLLAPRDYLSTFMKIGV IGLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFLFITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGML MESFVAMMALITAVILDRHLYFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLA FGMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRFKDPSWTVGNWISTVFVCALW GAILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVVVVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIG YWAQNANFRDAKSQGLTEFGAAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPD TESEFFAPTGFLASSRDKEVQAMWDERYPGGAPVSSGGH
Sequences:
>Translated_759_residues MTIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGETINSVWLVLAAVGSYIIAFS FYARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFGHHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAV QDYLVLWVSTRRRGRSLGQMVRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYL RYLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAILPVWLLLAPRDYLSTFMKIGV IGLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFLFITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGML MESFVAMMALITAVILDRHLYFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLA FGMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRFKDPSWTVGNWISTVFVCALW GAILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVVVVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIG YWAQNANFRDAKSQGLTEFGAAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPD TESEFFAPTGFLASSRDKEVQAMWDERYPGGAPVSSGGH >Mature_758_residues TIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGETINSVWLVLAAVGSYIIAFSF YARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFGHHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAVQ DYLVLWVSTRRRGRSLGQMVRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYLR YLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAILPVWLLLAPRDYLSTFMKIGVI GLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFLFITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGMLM ESFVAMMALITAVILDRHLYFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLAF GMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRFKDPSWTVGNWISTVFVCALWG AILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVVVVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIGY WAQNANFRDAKSQGLTEFGAAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPDT ESEFFAPTGFLASSRDKEVQAMWDERYPGGAPVSSGGH
Specific function: Peptide Utilization During Carbon Starvation. [C]
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI1786814, Length=688, Percent_Identity=53.3430232558139, Blast_Score=691, Evalue=0.0, Organism=Escherichia coli, GI87082431, Length=707, Percent_Identity=49.2220650636492, Blast_Score=629, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 81091; Mature: 80960
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGE CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCC TINSVWLVLAAVGSYIIAFSFYARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEHH HHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAVQDYLVLWVSTRRRGRSLGQM HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH RYLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAIL HHHCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHHH PVWLLLAPRDYLSTFMKIGVIGLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCHHHHHH FITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGMLMESFVAMMALITAVILDRHL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLA EEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHH FGMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC KDPSWTVGNWISTVFVCALWGAILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIGYWAQNANFRDAKSQGLTEFG HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCHHHC AAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TESEFFAPTGFLASSRDKEVQAMWDERYPGGAPVSSGGH CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGE CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCC TINSVWLVLAAVGSYIIAFSFYARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEHH HHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAVQDYLVLWVSTRRRGRSLGQM HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH RYLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAIL HHHCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHHH PVWLLLAPRDYLSTFMKIGVIGLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCHHHHHH FITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGMLMESFVAMMALITAVILDRHL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLA EEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHH FGMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC KDPSWTVGNWISTVFVCALWGAILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIGYWAQNANFRDAKSQGLTEFG HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCHHHC AAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TESEFFAPTGFLASSRDKEVQAMWDERYPGGAPVSSGGH CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]