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The map label for this gene is ybjT [H]

Identifier: 62389520

GI number: 62389520

Start: 642408

End: 644021

Strand: Direct

Name: ybjT [H]

Synonym: cg0727

Alternate gene names: 62389520

Gene position: 642408-644021 (Clockwise)

Preceding gene: 62389518

Following gene: 62389522

Centisome position: 19.57

GC content: 48.08

Gene sequence:

>1614_bases
TTGTGGATGGGTGAAGAATTTCATAGAAATCGCACTCGATTCACTAAAGACCCAAGAGTAAAATCCCAGGATTTGCTTAT
ACTTGCGCTCATGGATAATCAACTTCGTCCCACTTTGCATTATCAAGCTCAAAACCCGCACCGGCGAGTGCTGGTCACCG
GTGCGACAGGCTACATTGGCGGCAGGTTGATTACTGAGTTACTTGCTGCCGGTTTCCAAGTTCGGGCCACCTCGAGGAAA
AAAACAAGTCTTCAGCGCTTTGACTGGTACGAGGACGTCGAGGCAGTGGAAGCGGATCTGACTGACGCGACTGAGTTAGA
TACGTTATTTAAGGATGTAGACGTTGTTTACTATCTAGTGCATTCCATGGGAGGTAAGAATGTTGATTTTGAAGAGCAAG
AGCAACGCACTGCTGAAAATGTAATTCAAGCTGCTGATCAAGCCGGGATAAAACAGATTGTCTACCTTTCCGGCTTACAC
CCGCGTAATCGAAAAATAGAAGAACTATCTAAGCACATGCGCTCACGGGAAAAGGTCGCCCAGATTTTGCTGGCAGGCCA
GACACCAGCTTTAATTTTAAGGGCTGCCACAATTATTGGTTCCGGCTCTGCATCATTTGAAATAATCCGTCATCTCACGG
AGCGTTTGCCTAGAATGATAGCGCCTCAGTGGATTACTAATCAGATTGAGCCTTTAGCAATACGGGATGTTTTGCATTAC
CTAATCTCGGCGGCTGATTTAAAGGATCCAGTCAACCGCTCCTGCGATATTGGGTGTGGAAAGTCGTATGAATTTGCGGA
TCTATTGCGTATCTATGCCGATGTTCGGGGACTGAAACGTCATGTAAATTCCGTACCTCTCAATTTGCCCATGGACAAGC
TATCCGGTCTTTGGATTAGTCTAGTGACACCTGTTCCATTTCAATTGTCTTTCCCTTTAGCTCAATCAATGGCTGAGGAT
GCCGTCACTGAAGAGCACAGCATTAAAGATATTATTTCAGATCCACCCGATGGTTTTATTGAGTATCGGGAAGCAGTGGA
GCTGGCATTAGCTGCAGAATTTGATCGTGGAGTTCCAACGTCATGGGATCGAAGCTGGACTGTACAACAACCGTGGGCTG
GCCAGCCTACCGATCCAGAGTGGGCGGGCAAAGCTGTATATGAAGACGTCCGCACAGAAGATACTGATCTCCGAGCAGCG
CAGGTCTGGCCGATCATTGAAGGTTTGGGTGGCGTGAACGGCTGGTATTCTGCACCACTGCTATGGCGATTGCGGGGTAT
CGCTGACAGACTCATCGGCGGTCCAGGTTTGGGCGGACGGCGGGATCCCCGTCATTTGAAACTTGGGGATCGCATTGATT
GGTGGCGGGTTACTGAGATCGATCCACCACATAGATTAGTGCTCACCGCAGAGATGAAAGTAGATGGTGGCGCTTGGCTG
ATCCTGGAAGTTGCGGACAAGGAAAATGGCGGATGTACTTATACCCAGCGCGCAATATTTGAGCCGAAGGGTTTGCCCGG
TTATCTCTATTGGTGGGTTGTTTCACCGTTCCATGCGATTATTTTTCCTTATATGCGTTCGAATATTTTAAAAGCTGCGC
GTAAACTCACTTAA

Upstream 100 bases:

>100_bases
TGCTGTGGTGACAAGTTTGCTTGAAATGCGCATAAAGCAAATCCTTTCTTCATGTTTATATTAACTCAATAGTTATTACT
TCTAAAAGTATAGTAGATAG

Downstream 100 bases:

>100_bases
TCGCAGAGTAGGCGTCTAAAGCAATTTGACGGGATTCTTTCAGATCGACGATGGGATCCGGATATGATGGTGTTCCATAT
TCGGGTACCCAGCGACGAAT

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MWMGEEFHRNRTRFTKDPRVKSQDLLILALMDNQLRPTLHYQAQNPHRRVLVTGATGYIGGRLITELLAAGFQVRATSRK
KTSLQRFDWYEDVEAVEADLTDATELDTLFKDVDVVYYLVHSMGGKNVDFEEQEQRTAENVIQAADQAGIKQIVYLSGLH
PRNRKIEELSKHMRSREKVAQILLAGQTPALILRAATIIGSGSASFEIIRHLTERLPRMIAPQWITNQIEPLAIRDVLHY
LISAADLKDPVNRSCDIGCGKSYEFADLLRIYADVRGLKRHVNSVPLNLPMDKLSGLWISLVTPVPFQLSFPLAQSMAED
AVTEEHSIKDIISDPPDGFIEYREAVELALAAEFDRGVPTSWDRSWTVQQPWAGQPTDPEWAGKAVYEDVRTEDTDLRAA
QVWPIIEGLGGVNGWYSAPLLWRLRGIADRLIGGPGLGGRRDPRHLKLGDRIDWWRVTEIDPPHRLVLTAEMKVDGGAWL
ILEVADKENGGCTYTQRAIFEPKGLPGYLYWWVVSPFHAIIFPYMRSNILKAARKLT

Sequences:

>Translated_537_residues
MWMGEEFHRNRTRFTKDPRVKSQDLLILALMDNQLRPTLHYQAQNPHRRVLVTGATGYIGGRLITELLAAGFQVRATSRK
KTSLQRFDWYEDVEAVEADLTDATELDTLFKDVDVVYYLVHSMGGKNVDFEEQEQRTAENVIQAADQAGIKQIVYLSGLH
PRNRKIEELSKHMRSREKVAQILLAGQTPALILRAATIIGSGSASFEIIRHLTERLPRMIAPQWITNQIEPLAIRDVLHY
LISAADLKDPVNRSCDIGCGKSYEFADLLRIYADVRGLKRHVNSVPLNLPMDKLSGLWISLVTPVPFQLSFPLAQSMAED
AVTEEHSIKDIISDPPDGFIEYREAVELALAAEFDRGVPTSWDRSWTVQQPWAGQPTDPEWAGKAVYEDVRTEDTDLRAA
QVWPIIEGLGGVNGWYSAPLLWRLRGIADRLIGGPGLGGRRDPRHLKLGDRIDWWRVTEIDPPHRLVLTAEMKVDGGAWL
ILEVADKENGGCTYTQRAIFEPKGLPGYLYWWVVSPFHAIIFPYMRSNILKAARKLT
>Mature_537_residues
MWMGEEFHRNRTRFTKDPRVKSQDLLILALMDNQLRPTLHYQAQNPHRRVLVTGATGYIGGRLITELLAAGFQVRATSRK
KTSLQRFDWYEDVEAVEADLTDATELDTLFKDVDVVYYLVHSMGGKNVDFEEQEQRTAENVIQAADQAGIKQIVYLSGLH
PRNRKIEELSKHMRSREKVAQILLAGQTPALILRAATIIGSGSASFEIIRHLTERLPRMIAPQWITNQIEPLAIRDVLHY
LISAADLKDPVNRSCDIGCGKSYEFADLLRIYADVRGLKRHVNSVPLNLPMDKLSGLWISLVTPVPFQLSFPLAQSMAED
AVTEEHSIKDIISDPPDGFIEYREAVELALAAEFDRGVPTSWDRSWTVQQPWAGQPTDPEWAGKAVYEDVRTEDTDLRAA
QVWPIIEGLGGVNGWYSAPLLWRLRGIADRLIGGPGLGGRRDPRHLKLGDRIDWWRVTEIDPPHRLVLTAEMKVDGGAWL
ILEVADKENGGCTYTQRAIFEPKGLPGYLYWWVVSPFHAIIFPYMRSNILKAARKLT

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=490, Percent_Identity=30.2040816326531, Blast_Score=227, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 60788; Mature: 60788

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWMGEEFHRNRTRFTKDPRVKSQDLLILALMDNQLRPTLHYQAQNPHRRVLVTGATGYIG
CCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCHHH
GRLITELLAAGFQVRATSRKKTSLQRFDWYEDVEAVEADLTDATELDTLFKDVDVVYYLV
HHHHHHHHHCCCEEEECCHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HSMGGKNVDFEEQEQRTAENVIQAADQAGIKQIVYLSGLHPRNRKIEELSKHMRSREKVA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QILLAGQTPALILRAATIIGSGSASFEIIRHLTERLPRMIAPQWITNQIEPLAIRDVLHY
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH
LISAADLKDPVNRSCDIGCGKSYEFADLLRIYADVRGLKRHVNSVPLNLPMDKLSGLWIS
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEE
LVTPVPFQLSFPLAQSMAEDAVTEEHSIKDIISDPPDGFIEYREAVELALAAEFDRGVPT
EECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SWDRSWTVQQPWAGQPTDPEWAGKAVYEDVRTEDTDLRAAQVWPIIEGLGGVNGWYSAPL
CCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHCHH
LWRLRGIADRLIGGPGLGGRRDPRHLKLGDRIDWWRVTEIDPPHRLVLTAEMKVDGGAWL
HHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCEEEEEEEEEECCCEEE
ILEVADKENGGCTYTQRAIFEPKGLPGYLYWWVVSPFHAIIFPYMRSNILKAARKLT
EEEEECCCCCCEEEEHHHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWMGEEFHRNRTRFTKDPRVKSQDLLILALMDNQLRPTLHYQAQNPHRRVLVTGATGYIG
CCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCHHH
GRLITELLAAGFQVRATSRKKTSLQRFDWYEDVEAVEADLTDATELDTLFKDVDVVYYLV
HHHHHHHHHCCCEEEECCHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HSMGGKNVDFEEQEQRTAENVIQAADQAGIKQIVYLSGLHPRNRKIEELSKHMRSREKVA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QILLAGQTPALILRAATIIGSGSASFEIIRHLTERLPRMIAPQWITNQIEPLAIRDVLHY
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH
LISAADLKDPVNRSCDIGCGKSYEFADLLRIYADVRGLKRHVNSVPLNLPMDKLSGLWIS
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEE
LVTPVPFQLSFPLAQSMAEDAVTEEHSIKDIISDPPDGFIEYREAVELALAAEFDRGVPT
EECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SWDRSWTVQQPWAGQPTDPEWAGKAVYEDVRTEDTDLRAAQVWPIIEGLGGVNGWYSAPL
CCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHCHH
LWRLRGIADRLIGGPGLGGRRDPRHLKLGDRIDWWRVTEIDPPHRLVLTAEMKVDGGAWL
HHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCEEEEEEEEEECCCEEE
ILEVADKENGGCTYTQRAIFEPKGLPGYLYWWVVSPFHAIIFPYMRSNILKAARKLT
EEEEECCCCCCEEEEHHHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]