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The map label for this gene is cgtR7 [H]

Identifier: 62389503

GI number: 62389503

Start: 626446

End: 627138

Strand: Direct

Name: cgtR7 [H]

Synonym: cg0709

Alternate gene names: 62389503

Gene position: 626446-627138 (Clockwise)

Preceding gene: 62389502

Following gene: 62389504

Centisome position: 19.08

GC content: 58.3

Gene sequence:

>693_bases
ATGGTTGATGTGTTTTTGGTCGATGACCACTCCGTGTTTCGCTCCGGCGTCAAAGCAGAACTAGGCAACGCCGTCACAGT
AGTCGGCGAAGCAGGGACGGTGGCCGACGCCGTAGCCGGCATCAAGGCAAGCAAACCAGAGGTAGTGCTTCTCGACGTCC
ACATGCCCGACGGCGGCGGCCTCGCAGTGCTCCAGCAGATCAACGACTCCGATGTGGACACCATTTTCTTGGCACTCAGT
GTCTCTGATGCTGCGGAAGATGTCATCGCCATCATCCGTGGCGGTGCCAGGGGATACGTGACCAAATCAATCTCCGGTGA
AGAACTCATCGAAGCCATCAACCGCGTGAAATCCGGCGACGCATTCTTCTCACCACGCCTGGCAGGCTTCGTCCTCGACG
CCTTCGCCGCCCCCGATTCCGCAGCTGGCGCAGGCATTGTCGACGCACCCGAAAAAGACGCCGCCGTAGAATCCGGAAAA
ATCCTCGACGACCCAGTTGTCGACGCCCTCACCCGCCGCGAACTCGAAGTCCTCCGCCTACTAGCCCGCGGCTACACCTA
CAAAGAAATCGGCAAAGAACTGTTCATTTCCGTCAAAACCGTGGAAACCCACGCCTCAAACATTCTGCGGAAAACCCAAC
AATCCAACCGCCACGCGTTGACCCGGTGGGCTCACTCGAGGGATCTTGACTAA

Upstream 100 bases:

>100_bases
ACGCATCAAATCTGAAATCGGCGAAGGCACCGAAGTGGCAATCACCATGGATGTGTAGTTGGTCGTACGCGCGTGTCTTC
GGGGCTGTAACCTGAAAGGC

Downstream 100 bases:

>100_bases
TGGCGGCTAAAAAGAGTGGCGCTGGTTCTCGGGGTGGGGCTGGGAGGTCAGCTTCGGCTGATAAACAGATCGATCAAAGC
CAAGCGAAATTCACCTTCCA

Product: two component response regulator

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MVDVFLVDDHSVFRSGVKAELGNAVTVVGEAGTVADAVAGIKASKPEVVLLDVHMPDGGGLAVLQQINDSDVDTIFLALS
VSDAAEDVIAIIRGGARGYVTKSISGEELIEAINRVKSGDAFFSPRLAGFVLDAFAAPDSAAGAGIVDAPEKDAAVESGK
ILDDPVVDALTRRELEVLRLLARGYTYKEIGKELFISVKTVETHASNILRKTQQSNRHALTRWAHSRDLD

Sequences:

>Translated_230_residues
MVDVFLVDDHSVFRSGVKAELGNAVTVVGEAGTVADAVAGIKASKPEVVLLDVHMPDGGGLAVLQQINDSDVDTIFLALS
VSDAAEDVIAIIRGGARGYVTKSISGEELIEAINRVKSGDAFFSPRLAGFVLDAFAAPDSAAGAGIVDAPEKDAAVESGK
ILDDPVVDALTRRELEVLRLLARGYTYKEIGKELFISVKTVETHASNILRKTQQSNRHALTRWAHSRDLD
>Mature_230_residues
MVDVFLVDDHSVFRSGVKAELGNAVTVVGEAGTVADAVAGIKASKPEVVLLDVHMPDGGGLAVLQQINDSDVDTIFLALS
VSDAAEDVIAIIRGGARGYVTKSISGEELIEAINRVKSGDAFFSPRLAGFVLDAFAAPDSAAGAGIVDAPEKDAAVESGK
ILDDPVVDALTRRELEVLRLLARGYTYKEIGKELFISVKTVETHASNILRKTQQSNRHALTRWAHSRDLD

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790102, Length=224, Percent_Identity=33.4821428571429, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1788521, Length=222, Percent_Identity=35.1351351351351, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788222, Length=213, Percent_Identity=29.5774647887324, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787473, Length=225, Percent_Identity=28.8888888888889, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1788712, Length=225, Percent_Identity=23.1111111111111, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786747, Length=214, Percent_Identity=23.8317757009346, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24408; Mature: 24408

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDVFLVDDHSVFRSGVKAELGNAVTVVGEAGTVADAVAGIKASKPEVVLLDVHMPDGGG
CEEEEEECCHHHHHHCHHHHCCCEEEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCCC
LAVLQQINDSDVDTIFLALSVSDAAEDVIAIIRGGARGYVTKSISGEELIEAINRVKSGD
EEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC
AFFSPRLAGFVLDAFAAPDSAAGAGIVDAPEKDAAVESGKILDDPVVDALTRRELEVLRL
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LARGYTYKEIGKELFISVKTVETHASNILRKTQQSNRHALTRWAHSRDLD
HHCCCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MVDVFLVDDHSVFRSGVKAELGNAVTVVGEAGTVADAVAGIKASKPEVVLLDVHMPDGGG
CEEEEEECCHHHHHHCHHHHCCCEEEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCCC
LAVLQQINDSDVDTIFLALSVSDAAEDVIAIIRGGARGYVTKSISGEELIEAINRVKSGD
EEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC
AFFSPRLAGFVLDAFAAPDSAAGAGIVDAPEKDAAVESGKILDDPVVDALTRRELEVLRL
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LARGYTYKEIGKELFISVKTVETHASNILRKTQQSNRHALTRWAHSRDLD
HHCCCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12426351 [H]