| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
Click here to switch to the map view.
The map label for this gene is yjeF [C]
Identifier: 62389484
GI number: 62389484
Start: 607959
End: 609683
Strand: Direct
Name: yjeF [C]
Synonym: cg0688
Alternate gene names: 62389484
Gene position: 607959-609683 (Clockwise)
Preceding gene: 62389483
Following gene: 62389485
Centisome position: 18.52
GC content: 56.93
Gene sequence:
>1725_bases ATGAAACCAGTCTTCTCCGTTGACCAAATCCGACGCGCAGAAAACACCCTTTTTGAGCTTCAGGCAGATCCGGATGAGCT GATGATCTCCGCGGCATCGGCGGTGGCCGATGTCGCGTTGGCAATGGTGGACGGCCCCGCTCCAGCGGTCTCCAGTGAGG AGTCAATCCTGCTGCTGGTCGGCCCCGGTGGCAACGGTGGCGACGCCTTGTATGCAGGCGCGTTCCTTGCAGAAGAAGGC CACCACGTTGATGCTTTGCTGTTGGGAAACGGCAAAGTCCATCAATCAGCATTGGCATATTATGAGTCTTTGGGCGGGCA GATCATTTCCGATTTTCCCCCTCACTACCTCTACCGCCTGGTGATTGATGGTTTGTTTGGCATCGGTGGTCGGGGAGGGC TCACCCCAGAGCTGGCCAGTTTGGTGGAGTCTTTTTCCGCTTCAGGTATCCCCATTTTGGCGATTGATGTGCCGTCTGGC GTGCATGCCGATAGTGGTGAACTGCCGCCCGGCGTGATGGTGACGGTGGAAGGATTTGATAATGATGCACCGATGGCGCG TCAGAAAATTCCGGCACACATTGACGCTGATGTCACGATCACGTTTGGCGGTTTGAGACGCGCCCACGCGGTCAGTCCTG CGTGTGGTGAAGTGCTCTGTGCTGATATCAACATCGCTGGTGGCGGCGGAAAATCGCTGTCCGCTGAGTTGAGTCAGGTG CAGGCAGAAGACGCGACCCCGCAGATGTTTGCCTCCAAGGCGTATCAACGGAAAGATTCGCTTTTTGAGCGCGCGAATCT CAAAGCTACGGCGCCACATATCCATAGGATCGGCCAGCACTTTACCGTGTTGAACATGGAGCCTGGCCCGGATCATGATA AATACAGTGGCGGAATTGTCGGCATTGTTGCAGGTAGTGGCACCTATCCAGGTGCTGCTGTGCTGTCGGTGAAGGCGGCT GTCAGGGCCACAAGCGCCATGGTTCGATACGTTGGCCCTGCGTTAAATTTTGTCATCCAGTCGCTGCCGGAGGTCGTCGC AACGCAATCACTTGCCACCGCCGGCCGCGTGCAAGCGTGGGTGCACGGCCCCGGACGCGGGCTGGAGGCTGAGCAATCAG CCGAGCTTGCGGAGCTTTTGAGCCGGCCTGAGCCTGTGCTTATCGACGCCGACAGCCTCTCATTACTCCAGCTCTCAGCG GAGCTTCGGCAGGCGTTGCGCGAGCGAAAAGCACCAACGGTGCTCACTCCGCACAAGGGCGAATTTGAACGCATCGCAGC AGAATTACGCTCTGAAGGCGTCGAGATTCCCCAAGCGGACAAAGATCCCATTGGTGCTGCGCAAGCGTTAGCTAAAGAAT TTGATTGTTGCGTACTGCTCAAGGGGAAATACACCGTCATTGCAGCTCACGACTTTGTGCATGCGATCAACGCTGGGCAT TCCTGGTTGGCTACACCTGGCTCTGGCGATGTGTTGTCAGGTCTTGTCGGTGCACACTTGGCTCAAAGCTACGCAGAATT AAACCGCTTGCCGGAGTTTTTCCCCGATGTGACCTTGTCTGATTCGGCGATTTACACCCAGATTGCACCTGCTGCGACCA TCCACGCGGTTGCTGCTGGGTTGGCCGCACGAACCGAATTTGGGTTTGCGCCGACCTCCGCAAGTTTGATCGCTGATGCC ATCCCTGCAGCGACCGCCAAGGTGGATTTGAAGCGAATTGTCTAG
Upstream 100 bases:
>100_bases AATCCACGAAGGTGCCCAAGAATCACCAATTTCGGTCGGAACTGATCCTTCTTTGTCCGTTGAGACCCCACAGGTGTTTT AAACATTTAGTATTAGTTCC
Downstream 100 bases:
>100_bases CTCTGCATGAATTCCGTATGAATTCTTTTCTTTCAAGTGGCCGAGATGTGAAGCGCACGGTTAATTGAGAGGCATGACCT ACGGATTTCTTGTCAACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MKPVFSVDQIRRAENTLFELQADPDELMISAASAVADVALAMVDGPAPAVSSEESILLLVGPGGNGGDALYAGAFLAEEG HHVDALLLGNGKVHQSALAYYESLGGQIISDFPPHYLYRLVIDGLFGIGGRGGLTPELASLVESFSASGIPILAIDVPSG VHADSGELPPGVMVTVEGFDNDAPMARQKIPAHIDADVTITFGGLRRAHAVSPACGEVLCADINIAGGGGKSLSAELSQV QAEDATPQMFASKAYQRKDSLFERANLKATAPHIHRIGQHFTVLNMEPGPDHDKYSGGIVGIVAGSGTYPGAAVLSVKAA VRATSAMVRYVGPALNFVIQSLPEVVATQSLATAGRVQAWVHGPGRGLEAEQSAELAELLSRPEPVLIDADSLSLLQLSA ELRQALRERKAPTVLTPHKGEFERIAAELRSEGVEIPQADKDPIGAAQALAKEFDCCVLLKGKYTVIAAHDFVHAINAGH SWLATPGSGDVLSGLVGAHLAQSYAELNRLPEFFPDVTLSDSAIYTQIAPAATIHAVAAGLAARTEFGFAPTSASLIADA IPAATAKVDLKRIV
Sequences:
>Translated_574_residues MKPVFSVDQIRRAENTLFELQADPDELMISAASAVADVALAMVDGPAPAVSSEESILLLVGPGGNGGDALYAGAFLAEEG HHVDALLLGNGKVHQSALAYYESLGGQIISDFPPHYLYRLVIDGLFGIGGRGGLTPELASLVESFSASGIPILAIDVPSG VHADSGELPPGVMVTVEGFDNDAPMARQKIPAHIDADVTITFGGLRRAHAVSPACGEVLCADINIAGGGGKSLSAELSQV QAEDATPQMFASKAYQRKDSLFERANLKATAPHIHRIGQHFTVLNMEPGPDHDKYSGGIVGIVAGSGTYPGAAVLSVKAA VRATSAMVRYVGPALNFVIQSLPEVVATQSLATAGRVQAWVHGPGRGLEAEQSAELAELLSRPEPVLIDADSLSLLQLSA ELRQALRERKAPTVLTPHKGEFERIAAELRSEGVEIPQADKDPIGAAQALAKEFDCCVLLKGKYTVIAAHDFVHAINAGH SWLATPGSGDVLSGLVGAHLAQSYAELNRLPEFFPDVTLSDSAIYTQIAPAATIHAVAAGLAARTEFGFAPTSASLIADA IPAATAKVDLKRIV >Mature_574_residues MKPVFSVDQIRRAENTLFELQADPDELMISAASAVADVALAMVDGPAPAVSSEESILLLVGPGGNGGDALYAGAFLAEEG HHVDALLLGNGKVHQSALAYYESLGGQIISDFPPHYLYRLVIDGLFGIGGRGGLTPELASLVESFSASGIPILAIDVPSG VHADSGELPPGVMVTVEGFDNDAPMARQKIPAHIDADVTITFGGLRRAHAVSPACGEVLCADINIAGGGGKSLSAELSQV QAEDATPQMFASKAYQRKDSLFERANLKATAPHIHRIGQHFTVLNMEPGPDHDKYSGGIVGIVAGSGTYPGAAVLSVKAA VRATSAMVRYVGPALNFVIQSLPEVVATQSLATAGRVQAWVHGPGRGLEAEQSAELAELLSRPEPVLIDADSLSLLQLSA ELRQALRERKAPTVLTPHKGEFERIAAELRSEGVEIPQADKDPIGAAQALAKEFDCCVLLKGKYTVIAAHDFVHAINAGH SWLATPGSGDVLSGLVGAHLAQSYAELNRLPEFFPDVTLSDSAIYTQIAPAATIHAVAAGLAARTEFGFAPTSASLIADA IPAATAKVDLKRIV
Specific function: Unknown
COG id: COG0062
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=534, Percent_Identity=26.4044943820225, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 59796; Mature: 59796
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVFSVDQIRRAENTLFELQADPDELMISAASAVADVALAMVDGPAPAVSSEESILLLV CCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE GPGGNGGDALYAGAFLAEEGHHVDALLLGNGKVHQSALAYYESLGGQIISDFPPHYLYRL CCCCCCCCHHEEHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHH VIDGLFGIGGRGGLTPELASLVESFSASGIPILAIDVPSGVHADSGELPPGVMVTVEGFD HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCC NDAPMARQKIPAHIDADVTITFGGLRRAHAVSPACGEVLCADINIAGGGGKSLSAELSQV CCCCHHHHCCCCCCCCCEEEEECCCHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHH QAEDATPQMFASKAYQRKDSLFERANLKATAPHIHRIGQHFTVLNMEPGPDHDKYSGGIV HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCEE GIVAGSGTYPGAAVLSVKAAVRATSAMVRYVGPALNFVIQSLPEVVATQSLATAGRVQAW EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VHGPGRGLEAEQSAELAELLSRPEPVLIDADSLSLLQLSAELRQALRERKAPTVLTPHKG EECCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEECCCCC EFERIAAELRSEGVEIPQADKDPIGAAQALAKEFDCCVLLKGKYTVIAAHDFVHAINAGH HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCEEEEEEHHHHHHHCCCC SWLATPGSGDVLSGLVGAHLAQSYAELNRLPEFFPDVTLSDSAIYTQIAPAATIHAVAAG CEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCEECCCCCEEHHCCHHHHHHHHHH LAARTEFGFAPTSASLIADAIPAATAKVDLKRIV HHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MKPVFSVDQIRRAENTLFELQADPDELMISAASAVADVALAMVDGPAPAVSSEESILLLV CCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE GPGGNGGDALYAGAFLAEEGHHVDALLLGNGKVHQSALAYYESLGGQIISDFPPHYLYRL CCCCCCCCHHEEHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHH VIDGLFGIGGRGGLTPELASLVESFSASGIPILAIDVPSGVHADSGELPPGVMVTVEGFD HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCC NDAPMARQKIPAHIDADVTITFGGLRRAHAVSPACGEVLCADINIAGGGGKSLSAELSQV CCCCHHHHCCCCCCCCCEEEEECCCHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHH QAEDATPQMFASKAYQRKDSLFERANLKATAPHIHRIGQHFTVLNMEPGPDHDKYSGGIV HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCEE GIVAGSGTYPGAAVLSVKAAVRATSAMVRYVGPALNFVIQSLPEVVATQSLATAGRVQAW EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VHGPGRGLEAEQSAELAELLSRPEPVLIDADSLSLLQLSAELRQALRERKAPTVLTPHKG EECCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEECCCCC EFERIAAELRSEGVEIPQADKDPIGAAQALAKEFDCCVLLKGKYTVIAAHDFVHAINAGH HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCEEEEEEHHHHHHHCCCC SWLATPGSGDVLSGLVGAHLAQSYAELNRLPEFFPDVTLSDSAIYTQIAPAATIHAVAAG CEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCEECCCCCEEHHCCHHHHHHHHHH LAARTEFGFAPTSASLIADAIPAATAKVDLKRIV HHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]