| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is papA [H]
Identifier: 62389480
GI number: 62389480
Start: 604429
End: 605712
Strand: Direct
Name: papA [H]
Synonym: cg0684
Alternate gene names: 62389480
Gene position: 604429-605712 (Clockwise)
Preceding gene: 62389479
Following gene: 62389481
Centisome position: 18.41
GC content: 55.06
Gene sequence:
>1284_bases GTGGTGGGGGTGGTGTCCACCCCTGCGCGTAACCTGGGAAGCATGACTAAAACACTTGGTTCCCTTCAGCTGGAAGAAAT CACGCTGACCCTCCCTCTGACTGAAGATGTGGCCGATGAACGCACCATTGATGTGTTCGCACGCATTGCCACACGCGTCG GTGGGGAAGACCTTCCATATTTAGTATTCCTGCAGGGTGGGCCTGGCAATGAAGCTCCACGTCCAAGCCTTAATCCCCTC AACCCCAATTGGTTGGGCGTGGCCTTGGAGGAATACCGCGTGGTCATGTTGGATCAACGTGGCACCGGCCGTTCCACCCC AGTGGGTAATGATATTTTGGAAAAACCCACAGCAGAAGTAGTGGAGTACTTATCCCACCTGCGCGCAGATGGCATTGTGC GAGATGCTGAAGCCCTGCGTAAGCATTTGGGTGTGAATCAGTGGAACCTTTTAGGCCAGTCCTTCGGAGGTTTCACCACC CTGCATTACTTGTCCCGGCACGCCGATTCCTTGGACAACGTGTTTATTACCGGCGGTCTCAGCGCTATTGATCGCCCAGC AGAAGACGTGTATGCCAACTGTTACAACCGCATGCGCCGAAACTCTGAGGAATTCTACCGTCGCTTCCCGCAATTACGGG AAACTTTCCGAGGGTTGGTTAATCGTGCTCGCGCCGGGGAGATTGTGCTTCCCACCGGCGAAGTTGTGTCAGAAACCAGG CTGCGATCCCTTGGTCACTTGTTGGGTAGCAATGACGGCTGGTTTGATCTGTACAACCTGCTGGAATTAGATCCCACCTC CAACGCTTTTGTCCATGACCTGGCAGGACTTTTGCCTTTCGGCAACCGCAACCCAATTTATTACGTGCTCCATGAGTCCT CTTACGCCGACGGTGTGGTGACAAATTGGGCAGCAGAGCGTGTGCTTCCAGAGGATTTCCGCGAGGATCCAACACTGCTC ACCGGTGAGCACGTGTTCCAGGAGTGGACAGACACCGTGCCGTCGCTCAAGCCGTGGAAGGACGTTGCCCTGGCATTGGC TCAGCAGGAATGGCCCAAGCTTTATGATGCGAAGGCATTGGAAAACTCACAGGCCAAGGGCGCTGCAGCAGTGTATGCCA ATGACGTTTTCGTCCCAGTGGATTACTCTCTGGAAACCGCACAACACCTGCCCGGTGTGCAGCTGTTTATCACCAGCCAG CATGAACACAATGGACTTCGTGCCAGCTCAGGCGCAGTACTGAAGCACCTTTTCGATCTGGCCCACGGCCGAGAGGTACG CTGA
Upstream 100 bases:
>100_bases TGCCAACAGGGGATATGCCACTGTGTACCCCACGGCGATGATCGGTAAAATCCTCGGCGCGCAGATATTGTTCTTGCTGC TCTAAGGTGATTTTTGGGCA
Downstream 100 bases:
>100_bases TTCCTCGTGTTAGTACTAGCCCTAGACACCTCAACCCCTGACCTGATCGTCGGCGTCGTCGACTCCGACACCGGAAACAC CCGCGCCGAAACCATCATCG
Product: prolyl aminopeptidase A
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MVGVVSTPARNLGSMTKTLGSLQLEEITLTLPLTEDVADERTIDVFARIATRVGGEDLPYLVFLQGGPGNEAPRPSLNPL NPNWLGVALEEYRVVMLDQRGTGRSTPVGNDILEKPTAEVVEYLSHLRADGIVRDAEALRKHLGVNQWNLLGQSFGGFTT LHYLSRHADSLDNVFITGGLSAIDRPAEDVYANCYNRMRRNSEEFYRRFPQLRETFRGLVNRARAGEIVLPTGEVVSETR LRSLGHLLGSNDGWFDLYNLLELDPTSNAFVHDLAGLLPFGNRNPIYYVLHESSYADGVVTNWAAERVLPEDFREDPTLL TGEHVFQEWTDTVPSLKPWKDVALALAQQEWPKLYDAKALENSQAKGAAAVYANDVFVPVDYSLETAQHLPGVQLFITSQ HEHNGLRASSGAVLKHLFDLAHGREVR
Sequences:
>Translated_427_residues MVGVVSTPARNLGSMTKTLGSLQLEEITLTLPLTEDVADERTIDVFARIATRVGGEDLPYLVFLQGGPGNEAPRPSLNPL NPNWLGVALEEYRVVMLDQRGTGRSTPVGNDILEKPTAEVVEYLSHLRADGIVRDAEALRKHLGVNQWNLLGQSFGGFTT LHYLSRHADSLDNVFITGGLSAIDRPAEDVYANCYNRMRRNSEEFYRRFPQLRETFRGLVNRARAGEIVLPTGEVVSETR LRSLGHLLGSNDGWFDLYNLLELDPTSNAFVHDLAGLLPFGNRNPIYYVLHESSYADGVVTNWAAERVLPEDFREDPTLL TGEHVFQEWTDTVPSLKPWKDVALALAQQEWPKLYDAKALENSQAKGAAAVYANDVFVPVDYSLETAQHLPGVQLFITSQ HEHNGLRASSGAVLKHLFDLAHGREVR >Mature_427_residues MVGVVSTPARNLGSMTKTLGSLQLEEITLTLPLTEDVADERTIDVFARIATRVGGEDLPYLVFLQGGPGNEAPRPSLNPL NPNWLGVALEEYRVVMLDQRGTGRSTPVGNDILEKPTAEVVEYLSHLRADGIVRDAEALRKHLGVNQWNLLGQSFGGFTT LHYLSRHADSLDNVFITGGLSAIDRPAEDVYANCYNRMRRNSEEFYRRFPQLRETFRGLVNRARAGEIVLPTGEVVSETR LRSLGHLLGSNDGWFDLYNLLELDPTSNAFVHDLAGLLPFGNRNPIYYVLHESSYADGVVTNWAAERVLPEDFREDPTLL TGEHVFQEWTDTVPSLKPWKDVALALAQQEWPKLYDAKALENSQAKGAAAVYANDVFVPVDYSLETAQHLPGVQLFITSQ HEHNGLRASSGAVLKHLFDLAHGREVR
Specific function: Higher activity toward long peptides. Acts on hydroxyproline beta-naphthylamide with almost as high an activity as on proline beta-naphthylamide [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 47496; Mature: 47496
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGVVSTPARNLGSMTKTLGSLQLEEITLTLPLTEDVADERTIDVFARIATRVGGEDLPY CCCCCCCCHHHHHHHHHHHHCEEEEEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCCCCE LVFLQGGPGNEAPRPSLNPLNPNWLGVALEEYRVVMLDQRGTGRSTPVGNDILEKPTAEV EEEEECCCCCCCCCCCCCCCCCCCEEEEHHHEEEEEEECCCCCCCCCCCCHHHCCCHHHH VEYLSHLRADGIVRDAEALRKHLGVNQWNLLGQSFGGFTTLHYLSRHADSLDNVFITGGL HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCH SAIDRPAEDVYANCYNRMRRNSEEFYRRFPQLRETFRGLVNRARAGEIVLPTGEVVSETR HHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH LRSLGHLLGSNDGWFDLYNLLELDPTSNAFVHDLAGLLPFGNRNPIYYVLHESSYADGVV HHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHH TNWAAERVLPEDFREDPTLLTGEHVFQEWTDTVPSLKPWKDVALALAQQEWPKLYDAKAL HHHHHHHCCCHHHCCCCCEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ENSQAKGAAAVYANDVFVPVDYSLETAQHLPGVQLFITSQHEHNGLRASSGAVLKHLFDL CCCCCCCCEEEEECCEEEECCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH AHGREVR HCCCCCC >Mature Secondary Structure MVGVVSTPARNLGSMTKTLGSLQLEEITLTLPLTEDVADERTIDVFARIATRVGGEDLPY CCCCCCCCHHHHHHHHHHHHCEEEEEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCCCCE LVFLQGGPGNEAPRPSLNPLNPNWLGVALEEYRVVMLDQRGTGRSTPVGNDILEKPTAEV EEEEECCCCCCCCCCCCCCCCCCCEEEEHHHEEEEEEECCCCCCCCCCCCHHHCCCHHHH VEYLSHLRADGIVRDAEALRKHLGVNQWNLLGQSFGGFTTLHYLSRHADSLDNVFITGGL HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCH SAIDRPAEDVYANCYNRMRRNSEEFYRRFPQLRETFRGLVNRARAGEIVLPTGEVVSETR HHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH LRSLGHLLGSNDGWFDLYNLLELDPTSNAFVHDLAGLLPFGNRNPIYYVLHESSYADGVV HHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHH TNWAAERVLPEDFREDPTLLTGEHVFQEWTDTVPSLKPWKDVALALAQQEWPKLYDAKAL HHHHHHHCCCHHHCCCCCEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ENSQAKGAAAVYANDVFVPVDYSLETAQHLPGVQLFITSQHEHNGLRASSGAVLKHLFDL CCCCCCCCEEEEECCEEEECCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH AHGREVR HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883756 [H]