Click here to switch to the map view.

The map label for this gene is mmsA [H]

Identifier: 62389435

GI number: 62389435

Start: 558196

End: 558519

Strand: Reverse

Name: mmsA [H]

Synonym: cg0635

Alternate gene names: 62389435

Gene position: 558519-558196 (Counterclockwise)

Preceding gene: 62389436

Following gene: 62389428

Centisome position: 17.01

GC content: 47.84

Gene sequence:

>324_bases
TTGGAAAGTTCCAATTCTCAGGCACAGGGACGTGCGGACAGAATTCTCGATTCAGCCTTGAAAGAAGGCGCTTCAATAGT
TGTTGATGGCCGTACAGCTCGAGAATTTCAGATGGACATCGAAGTCGGAATGGTTGGCATTAACGTGCCAATCCCAGTCC
CAATTGGCGCTTTCTCATTTGGAGGTTGGAAAGACTCACTATTCGGAGACACACACATGTATGGATCTGAGTCTTTCAAC
TTCTATACCCGAAGCAAGGTGGTTACCACTCGCTGGCCTCTTCCAAATGAATCACAGATTGAGCTTGGCTTCCCCACCCA
CTAA

Upstream 100 bases:

>100_bases
AAGCTACTAGTTAACCCTTTTCGCCAAAATCAAACCTCACCGGAATCTCTACAAGCCAAGAACAAGATATTCGCCAATAG
AGCCCCTTCAAAAGGCCAGG

Downstream 100 bases:

>100_bases
GTAAGTCTCTTTGCAATGCCACTCTTGTTACCCCACAGAGTGGCATTTTCCATGCACTCAAATCAAACCCAATCAGTAGG
CCCCCTGCGCAATCCCCCTC

Product: NAD-dependent aldehyde dehydrogenase

Products: NA

Alternate protein names: MMSDH [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MESSNSQAQGRADRILDSALKEGASIVVDGRTAREFQMDIEVGMVGINVPIPVPIGAFSFGGWKDSLFGDTHMYGSESFN
FYTRSKVVTTRWPLPNESQIELGFPTH

Sequences:

>Translated_107_residues
MESSNSQAQGRADRILDSALKEGASIVVDGRTAREFQMDIEVGMVGINVPIPVPIGAFSFGGWKDSLFGDTHMYGSESFN
FYTRSKVVTTRWPLPNESQIELGFPTH
>Mature_107_residues
MESSNSQAQGRADRILDSALKEGASIVVDGRTAREFQMDIEVGMVGINVPIPVPIGAFSFGGWKDSLFGDTHMYGSESFN
FYTRSKVVTTRWPLPNESQIELGFPTH

Specific function: Unknown

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI11095441, Length=69, Percent_Identity=46.3768115942029, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71986308, Length=74, Percent_Identity=50, Blast_Score=76, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24638878, Length=85, Percent_Identity=42.3529411764706, Blast_Score=74, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24638876, Length=85, Percent_Identity=42.3529411764706, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010061 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.27 [H]

Molecular weight: Translated: 11783; Mature: 11783

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSNSQAQGRADRILDSALKEGASIVVDGRTAREFQMDIEVGMVGINVPIPVPIGAFSF
CCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCC
GGWKDSLFGDTHMYGSESFNFYTRSKVVTTRWPLPNESQIELGFPTH
CCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEEECCCCC
>Mature Secondary Structure
MESSNSQAQGRADRILDSALKEGASIVVDGRTAREFQMDIEVGMVGINVPIPVPIGAFSF
CCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCC
GGWKDSLFGDTHMYGSESFNFYTRSKVVTTRWPLPNESQIELGFPTH
CCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339433; 10984043 [H]